| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317245
Identifier: 158317245
GI number: 158317245
Start: 6646600
End: 6647625
Strand: Reverse
Name: 158317245
Synonym: Franean1_5492
Alternate gene names: NA
Gene position: 6647625-6646600 (Counterclockwise)
Preceding gene: 158317247
Following gene: 158317239
Centisome position: 74.01
GC content: 74.27
Gene sequence:
>1026_bases GTGTTACGACGCCGTAAATGCGGCTGCCGGCTATTGCCGGTTCGCCGGACTGGTACCAGAATCGGACGGGCACAGCTCGC CGCGGGACCATCCGCGGCGGTGATTCGCTCCCTGCTCGGTGCGCCAGCCGGTTCGGTGCCCATCGAGCTCGGTGCGCCGT CGACGAACTCTGCCGCGCCGGTCCGCGTCCGCGTCGGGCGGCAGCCGGCAGCCGATCCGGTCGGGATGCTCTTGGCCAGC GACGTCTTCACCTTCGGCGCCGCGCCGGCGCGTCCCTACGCTCTGCTGGCCGTCGAAGGCCCGGCCGGAGCGGGCAAGCT CGCCCTGGTGCGGCGGCTGACTGCGGCACCGGCGGCGCTGCACCTGCACCTGGCGTCGCAGACCGACGCGGTGCTCCGGG ACCTGATGCGGCGGCTGAGTACTCTCGGTGAGCCGCTCGGCGCGGTCCCGGCGAATCTCGTCCACGCCGCTCGCCTGATC GAGGCCGCCGTCCAGTTCCGGTACCTGGAGGAGTTCCTGGCGGGGTTTGACCTGGTGGTGGCCGACCGCTGGATCCAGAC CTGGGAGGTCTACTGCGGGGACCTCGGCGAGTACACCGAGTGGTACCTGCAGATCGCCTCGTACGTGCCCGTTCCCGACC TCGTGCTCTATCTGCGCGTCTCGCCCGAGGTGGCGGCCGCGCGGCTGGCACGCCGGGCGTCGGCAGGGCAGGCCACAGCG GGGCATGGGCCGGCGGGACAGGCTTCAGCGGGGCAGGAGTCGGGGGGGTCGGCCTCAGCGGGCCGGGAGTCCGCGGGCCG GGTGGACGAGGCCGCGGCCCTGCGGGAGGCCGTCGAGGCGTGCGCGCGCTACGACGAGGTGATGTCCGGCGTCGACTGTG TCGTCATCGACGCGGACGCGCCGGCCGCGGACGTGCTGGCGGAGGTGACCGGGGTCCTGGACGCCGTCGGGGTGCCGCGC CCGCCGATCCCCGGGACAGGTGGCGGGGCGGACGCGCCCTGGCCGGGGCCGCTCAGGGGGGCGTGA
Upstream 100 bases:
>100_bases CCTCCACGGCCACAAGCAGTGGATCTTTCCGGCTCATGCCCGAACTGTAGATCGCCGGCGGCGGGCGCGTCCGCCGCTCG GGTGAGCGGGGCCCACCGGA
Downstream 100 bases:
>100_bases AGCGCACCGGGAGCGCGGCGACCCCACGCGCCCACACCGACGGGCGCCAGCGCAGGTCCCGCGGCTCCACGGCGAGCTCG AGATCGGGGAGGCGGTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLRRRKCGCRLLPVRRTGTRIGRAQLAAGPSAAVIRSLLGAPAGSVPIELGAPSTNSAAPVRVRVGRQPAADPVGMLLAS DVFTFGAAPARPYALLAVEGPAGAGKLALVRRLTAAPAALHLHLASQTDAVLRDLMRRLSTLGEPLGAVPANLVHAARLI EAAVQFRYLEEFLAGFDLVVADRWIQTWEVYCGDLGEYTEWYLQIASYVPVPDLVLYLRVSPEVAAARLARRASAGQATA GHGPAGQASAGQESGGSASAGRESAGRVDEAAALREAVEACARYDEVMSGVDCVVIDADAPAADVLAEVTGVLDAVGVPR PPIPGTGGGADAPWPGPLRGA
Sequences:
>Translated_341_residues MLRRRKCGCRLLPVRRTGTRIGRAQLAAGPSAAVIRSLLGAPAGSVPIELGAPSTNSAAPVRVRVGRQPAADPVGMLLAS DVFTFGAAPARPYALLAVEGPAGAGKLALVRRLTAAPAALHLHLASQTDAVLRDLMRRLSTLGEPLGAVPANLVHAARLI EAAVQFRYLEEFLAGFDLVVADRWIQTWEVYCGDLGEYTEWYLQIASYVPVPDLVLYLRVSPEVAAARLARRASAGQATA GHGPAGQASAGQESGGSASAGRESAGRVDEAAALREAVEACARYDEVMSGVDCVVIDADAPAADVLAEVTGVLDAVGVPR PPIPGTGGGADAPWPGPLRGA >Mature_341_residues MLRRRKCGCRLLPVRRTGTRIGRAQLAAGPSAAVIRSLLGAPAGSVPIELGAPSTNSAAPVRVRVGRQPAADPVGMLLAS DVFTFGAAPARPYALLAVEGPAGAGKLALVRRLTAAPAALHLHLASQTDAVLRDLMRRLSTLGEPLGAVPANLVHAARLI EAAVQFRYLEEFLAGFDLVVADRWIQTWEVYCGDLGEYTEWYLQIASYVPVPDLVLYLRVSPEVAAARLARRASAGQATA GHGPAGQASAGQESGGSASAGRESAGRVDEAAALREAVEACARYDEVMSGVDCVVIDADAPAADVLAEVTGVLDAVGVPR PPIPGTGGGADAPWPGPLRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35166; Mature: 35166
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRRKCGCRLLPVRRTGTRIGRAQLAAGPSAAVIRSLLGAPAGSVPIELGAPSTNSAAP CCCCCCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCC VRVRVGRQPAADPVGMLLASDVFTFGAAPARPYALLAVEGPAGAGKLALVRRLTAAPAAL EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEE HLHLASQTDAVLRDLMRRLSTLGEPLGAVPANLVHAARLIEAAVQFRYLEEFLAGFDLVV EEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ADRWIQTWEVYCGDLGEYTEWYLQIASYVPVPDLVLYLRVSPEVAAARLARRASAGQATA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC GHGPAGQASAGQESGGSASAGRESAGRVDEAAALREAVEACARYDEVMSGVDCVVIDADA CCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PAADVLAEVTGVLDAVGVPRPPIPGTGGGADAPWPGPLRGA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRRRKCGCRLLPVRRTGTRIGRAQLAAGPSAAVIRSLLGAPAGSVPIELGAPSTNSAAP CCCCCCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCC VRVRVGRQPAADPVGMLLASDVFTFGAAPARPYALLAVEGPAGAGKLALVRRLTAAPAAL EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEE HLHLASQTDAVLRDLMRRLSTLGEPLGAVPANLVHAARLIEAAVQFRYLEEFLAGFDLVV EEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ADRWIQTWEVYCGDLGEYTEWYLQIASYVPVPDLVLYLRVSPEVAAARLARRASAGQATA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC GHGPAGQASAGQESGGSASAGRESAGRVDEAAALREAVEACARYDEVMSGVDCVVIDADA CCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PAADVLAEVTGVLDAVGVPRPPIPGTGGGADAPWPGPLRGA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA