| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is btuE [C]
Identifier: 158317238
GI number: 158317238
Start: 6637703
End: 6638239
Strand: Reverse
Name: btuE [C]
Synonym: Franean1_5485
Alternate gene names: 158317238
Gene position: 6638239-6637703 (Counterclockwise)
Preceding gene: 158317239
Following gene: 158317236
Centisome position: 73.91
GC content: 67.97
Gene sequence:
>537_bases ATGACTGTCCATGACTTCACCGTCGAGGCGACGGACGGCACCTCCCGATCCCTGCGCGACTACGCCGGCAAGACGCTGCT GATCGTCAACGTCGCCAGCAAGTGCGGCCTGACCCCGCAGTACGAGGGGCTGGAGGCGCTCTACCGCGACCTGAAGGGGC GGGGGCTGGAGATCCTCGGCTTCCCCTGCAACCAGTTCGGCGGCCAGGAGCCGGGCACCGACGCCGAGATCCAGGAGTTC TGCTCGACGAACTTCGACGTCACCTTCCCCGTCTTCAGCAAGATCGAGGTGAACGGCCCCGGCGCGGCCCCGCTGTACGA CTACCTGCGCTCGGAGGCCCCCGGCGACTTCGGCCCGGAGTCGGGCTTCCTCTACGAGCACATCAAGCGCTCGCGGCCCG AGGCGATCGGTACCGACGAGGTGAAGTGGAACTTCACCAAGTTCCTGGTGGACGGCGAGGGCAAGGTCGTCCGCCGCTTC GAGCCCACCGTCACCCCGGACGAGCTCCGCGGCGAGCTCGACACCTCCCTGGCCTGA
Upstream 100 bases:
>100_bases GCTGTGTCCGGTCCTGCCCGGCCGGCTCCCGCTACGCGTCGGCGTCCCCGCCGCCGGACCTGCGGTCGTCGGGTCCGCAC CACCGAGAGCTAGGTCGATC
Downstream 100 bases:
>100_bases CGGGAGCGCTGTCGCTGACCCGGTAGCGCTGTAGCTGTCCGCCGCCCGGCAGACCGCCGGGCGGCGGACACGCGTGGCGG TCAGTGGCTCGGGCGGACCT
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTVHDFTVEATDGTSRSLRDYAGKTLLIVNVASKCGLTPQYEGLEALYRDLKGRGLEILGFPCNQFGGQEPGTDAEIQEF CSTNFDVTFPVFSKIEVNGPGAAPLYDYLRSEAPGDFGPESGFLYEHIKRSRPEAIGTDEVKWNFTKFLVDGEGKVVRRF EPTVTPDELRGELDTSLA
Sequences:
>Translated_178_residues MTVHDFTVEATDGTSRSLRDYAGKTLLIVNVASKCGLTPQYEGLEALYRDLKGRGLEILGFPCNQFGGQEPGTDAEIQEF CSTNFDVTFPVFSKIEVNGPGAAPLYDYLRSEAPGDFGPESGFLYEHIKRSRPEAIGTDEVKWNFTKFLVDGEGKVVRRF EPTVTPDELRGELDTSLA >Mature_177_residues TVHDFTVEATDGTSRSLRDYAGKTLLIVNVASKCGLTPQYEGLEALYRDLKGRGLEILGFPCNQFGGQEPGTDAEIQEFC STNFDVTFPVFSKIEVNGPGAAPLYDYLRSEAPGDFGPESGFLYEHIKRSRPEAIGTDEVKWNFTKFLVDGEGKVVRRFE PTVTPDELRGELDTSLA
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI15618997, Length=171, Percent_Identity=40.3508771929825, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI75709200, Length=173, Percent_Identity=37.5722543352601, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI90903240, Length=166, Percent_Identity=38.5542168674699, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI192455698, Length=173, Percent_Identity=32.9479768786127, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI4557629, Length=182, Percent_Identity=34.6153846153846, Blast_Score=101, Evalue=3e-22, Organism=Homo sapiens, GI90903238, Length=148, Percent_Identity=37.8378378378378, Blast_Score=98, Evalue=4e-21, Organism=Homo sapiens, GI6006001, Length=178, Percent_Identity=36.5168539325843, Blast_Score=97, Evalue=6e-21, Organism=Homo sapiens, GI33186887, Length=168, Percent_Identity=34.5238095238095, Blast_Score=94, Evalue=5e-20, Organism=Homo sapiens, GI41406084, Length=166, Percent_Identity=37.9518072289157, Blast_Score=92, Evalue=2e-19, Organism=Homo sapiens, GI32967607, Length=168, Percent_Identity=31.547619047619, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI1788003, Length=163, Percent_Identity=52.1472392638037, Blast_Score=170, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17506887, Length=177, Percent_Identity=41.8079096045198, Blast_Score=144, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17535473, Length=177, Percent_Identity=41.8079096045198, Blast_Score=141, Evalue=2e-34, Organism=Caenorhabditis elegans, GI193210707, Length=177, Percent_Identity=38.4180790960452, Blast_Score=115, Evalue=9e-27, Organism=Caenorhabditis elegans, GI71993584, Length=180, Percent_Identity=33.8888888888889, Blast_Score=108, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17550320, Length=172, Percent_Identity=30.8139534883721, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI193209493, Length=173, Percent_Identity=30.0578034682081, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193210709, Length=74, Percent_Identity=45.945945945946, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71993573, Length=98, Percent_Identity=33.6734693877551, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6319721, Length=180, Percent_Identity=45.5555555555556, Blast_Score=162, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6322228, Length=155, Percent_Identity=47.0967741935484, Blast_Score=148, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6322826, Length=166, Percent_Identity=39.7590361445783, Blast_Score=126, Evalue=2e-30, Organism=Drosophila melanogaster, GI24656772, Length=179, Percent_Identity=41.340782122905, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI24656767, Length=179, Percent_Identity=41.340782122905, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI24656777, Length=179, Percent_Identity=41.340782122905, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI85726443, Length=179, Percent_Identity=36.8715083798883, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 19652; Mature: 19521
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVHDFTVEATDGTSRSLRDYAGKTLLIVNVASKCGLTPQYEGLEALYRDLKGRGLEILG CCCEEEEEEECCCCCHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCEEEEE FPCNQFGGQEPGTDAEIQEFCSTNFDVTFPVFSKIEVNGPGAAPLYDYLRSEAPGDFGPE CCHHHCCCCCCCCCHHHHHHHCCCCCEEECEEEEEEECCCCCCHHHHHHHHCCCCCCCCC SGFLYEHIKRSRPEAIGTDEVKWNFTKFLVDGEGKVVRRFEPTVTPDELRGELDTSLA CCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHCCHHCCCC >Mature Secondary Structure TVHDFTVEATDGTSRSLRDYAGKTLLIVNVASKCGLTPQYEGLEALYRDLKGRGLEILG CCEEEEEEECCCCCHHHHHHCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCEEEEE FPCNQFGGQEPGTDAEIQEFCSTNFDVTFPVFSKIEVNGPGAAPLYDYLRSEAPGDFGPE CCHHHCCCCCCCCCHHHHHHHCCCCCEEECEEEEEEECCCCCCHHHHHHHHCCCCCCCCC SGFLYEHIKRSRPEAIGTDEVKWNFTKFLVDGEGKVVRRFEPTVTPDELRGELDTSLA CCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]