| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317227
Identifier: 158317227
GI number: 158317227
Start: 6618714
End: 6619940
Strand: Direct
Name: 158317227
Synonym: Franean1_5474
Alternate gene names: NA
Gene position: 6618714-6619940 (Clockwise)
Preceding gene: 158317226
Following gene: 158317230
Centisome position: 73.69
GC content: 70.9
Gene sequence:
>1227_bases ATGCGTAAGATCCTGATCGTCGGCGCGGGCCAGTCGGGCCTGCAGCTGGCCCTGACCCTGCGCGAGCACGACTACGACGT GACGGTGATGTCCGCGCGCTCCCCCGAGGAGATCCGCCGGGGCCGGGTGATGTCGACCCAGGCGATGTTCCACAGCGCGC TGCAGGCCGAGCGCGACCACGGGCTCAACCTCTGGGAGGACGACACCGTCCGCATCGAGGGCCTCGGGGTCTCGATCGCG GGGCCGGACGGCAGCCGGCCTCTCGACTGGTTCTCCCCGCTGGACCACTACGCGCAGTCGGTCGACCAGCGGGTCAAGAT GGCCGGCTGGGCCGAGCTGTTCGAGGAGCGCGGCGGCAAGCTCATCCTGCACGGTGTCACCACGGCCGACCTGAACGGGC TCGCCGAGCTCTACGACCTCGTCGTGGTCGCCGCCGGCAAGGGCGAGCTGGTCGGCCTGTTCGACCGCGACGCCGCCCGC TCGCCGTACACCTCACCCCAGCGCGCGCTGTCACTCGCGTACGTGCACGGCCTGGCGCCCAGGCCGGAGCATCCCACCGC GCCGGGCGTGCGATTCAACATCATCCCCGGCGTCGGCGAGCTGTTCATGATCCCGGCTTACACGCTGAGCGGGAACTGCG ACATCCTCTTCTTCGAGGGGATCCCGGGCGGTCCGCTGGACTGCTGGGACGACCACCCGAAGCCCGACGAGCACCTGCGC CGCATCCTGGACCTCATCGAGCGGTTCCTGCCCTGGGAGTACGAGCGCTGCGCGAAGGTCGAGCTCACCGACGCCCACGC GACCCTCTCCGGCGGGTACACGCCCGTCGTGCGGCGGCCGGTGGGCAACCTGCCGTCGGGCGGGGCGGTGCTCGGGATGG CCGACGTCGTCGTGGCGAACGACCCGATCACCGGCCAGGGCTCGAACAACGCCGCGAAGTGCGCCGCGTCCTACCTGGAC AGCATTCTCGAGCACGGTGCCAAGCCGTTCGACCAGGCGTGGATGCAGGCCGCCTTCGACCGCTACTGGGCGAGCGCGCA GGACGTCACGGTCTGGACGAACGCCCTGCTGCAGCCCCCGCCGCCGCACGTGCAGCAGATCCTCGGCGCCGCGCAGGCGA ACCCCACGGTCGCCCGGCGGTTCGTGAACGGCTTCGACAATCCGTCCGACTTCCAGGACTGGTTCCTCGACCCGGAGAAG GCGGCGGCCTACCTGGCCTCCGCCTGA
Upstream 100 bases:
>100_bases GACGCCCGCGAGACGGCGTCGACGGCCCAGGTGCTGCGGGACCTGGTTGTTCACACGATGTCACTGGCCCAGGTCCCGGA ACCCAGGAGGACACGGACGC
Downstream 100 bases:
>100_bases GCCCGCCCGCACCCGCCGCGGCCGGCGCCAGCCGGCCCGGCACGGCGGCGGCGGTAGCCGGGCCTGTTCGCCGCCGGCCC GCCAGCCCCGTTCCGGCCGC
Product: putative oxygenase subunit protein
Products: NA
Alternate protein names: Oxygenase Subunit; Monooxygenase; Oxygenase; Oxidoreductase; Dehydrogenase/Oxygenase Subunit; FAD Dependent Oxidoreductase; Styrene Monooxygenase; FAD-Dependent Oxiredutase; Monooxygenase Component B; Monooxygenase Subunit
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MRKILIVGAGQSGLQLALTLREHDYDVTVMSARSPEEIRRGRVMSTQAMFHSALQAERDHGLNLWEDDTVRIEGLGVSIA GPDGSRPLDWFSPLDHYAQSVDQRVKMAGWAELFEERGGKLILHGVTTADLNGLAELYDLVVVAAGKGELVGLFDRDAAR SPYTSPQRALSLAYVHGLAPRPEHPTAPGVRFNIIPGVGELFMIPAYTLSGNCDILFFEGIPGGPLDCWDDHPKPDEHLR RILDLIERFLPWEYERCAKVELTDAHATLSGGYTPVVRRPVGNLPSGGAVLGMADVVVANDPITGQGSNNAAKCAASYLD SILEHGAKPFDQAWMQAAFDRYWASAQDVTVWTNALLQPPPPHVQQILGAAQANPTVARRFVNGFDNPSDFQDWFLDPEK AAAYLASA
Sequences:
>Translated_408_residues MRKILIVGAGQSGLQLALTLREHDYDVTVMSARSPEEIRRGRVMSTQAMFHSALQAERDHGLNLWEDDTVRIEGLGVSIA GPDGSRPLDWFSPLDHYAQSVDQRVKMAGWAELFEERGGKLILHGVTTADLNGLAELYDLVVVAAGKGELVGLFDRDAAR SPYTSPQRALSLAYVHGLAPRPEHPTAPGVRFNIIPGVGELFMIPAYTLSGNCDILFFEGIPGGPLDCWDDHPKPDEHLR RILDLIERFLPWEYERCAKVELTDAHATLSGGYTPVVRRPVGNLPSGGAVLGMADVVVANDPITGQGSNNAAKCAASYLD SILEHGAKPFDQAWMQAAFDRYWASAQDVTVWTNALLQPPPPHVQQILGAAQANPTVARRFVNGFDNPSDFQDWFLDPEK AAAYLASA >Mature_408_residues MRKILIVGAGQSGLQLALTLREHDYDVTVMSARSPEEIRRGRVMSTQAMFHSALQAERDHGLNLWEDDTVRIEGLGVSIA GPDGSRPLDWFSPLDHYAQSVDQRVKMAGWAELFEERGGKLILHGVTTADLNGLAELYDLVVVAAGKGELVGLFDRDAAR SPYTSPQRALSLAYVHGLAPRPEHPTAPGVRFNIIPGVGELFMIPAYTLSGNCDILFFEGIPGGPLDCWDDHPKPDEHLR RILDLIERFLPWEYERCAKVELTDAHATLSGGYTPVVRRPVGNLPSGGAVLGMADVVVANDPITGQGSNNAAKCAASYLD SILEHGAKPFDQAWMQAAFDRYWASAQDVTVWTNALLQPPPPHVQQILGAAQANPTVARRFVNGFDNPSDFQDWFLDPEK AAAYLASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44542; Mature: 44542
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILIVGAGQSGLQLALTLREHDYDVTVMSARSPEEIRRGRVMSTQAMFHSALQAERDH CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHC GLNLWEDDTVRIEGLGVSIAGPDGSRPLDWFSPLDHYAQSVDQRVKMAGWAELFEERGGK CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LILHGVTTADLNGLAELYDLVVVAAGKGELVGLFDRDAARSPYTSPQRALSLAYVHGLAP EEEEECCHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC RPEHPTAPGVRFNIIPGVGELFMIPAYTLSGNCDILFFEGIPGGPLDCWDDHPKPDEHLR CCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHH RILDLIERFLPWEYERCAKVELTDAHATLSGGYTPVVRRPVGNLPSGGAVLGMADVVVAN HHHHHHHHHCCCCCHHHCEEEEECCCEEECCCCCCEEECCCCCCCCCCEEEEEEEEEEEC DPITGQGSNNAAKCAASYLDSILEHGAKPFDQAWMQAAFDRYWASAQDVTVWTNALLQPP CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCC PPHVQQILGAAQANPTVARRFVNGFDNPSDFQDWFLDPEKAAAYLASA CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MRKILIVGAGQSGLQLALTLREHDYDVTVMSARSPEEIRRGRVMSTQAMFHSALQAERDH CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHC GLNLWEDDTVRIEGLGVSIAGPDGSRPLDWFSPLDHYAQSVDQRVKMAGWAELFEERGGK CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LILHGVTTADLNGLAELYDLVVVAAGKGELVGLFDRDAARSPYTSPQRALSLAYVHGLAP EEEEECCHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC RPEHPTAPGVRFNIIPGVGELFMIPAYTLSGNCDILFFEGIPGGPLDCWDDHPKPDEHLR CCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHH RILDLIERFLPWEYERCAKVELTDAHATLSGGYTPVVRRPVGNLPSGGAVLGMADVVVAN HHHHHHHHHCCCCCHHHCEEEEECCCEEECCCCCCEEECCCCCCCCCCEEEEEEEEEEEC DPITGQGSNNAAKCAASYLDSILEHGAKPFDQAWMQAAFDRYWASAQDVTVWTNALLQPP CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCC PPHVQQILGAAQANPTVARRFVNGFDNPSDFQDWFLDPEKAAAYLASA CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA