Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yjiB [H]

Identifier: 158317196

GI number: 158317196

Start: 6584905

End: 6586161

Strand: Reverse

Name: yjiB [H]

Synonym: Franean1_5443

Alternate gene names: 158317196

Gene position: 6586161-6584905 (Counterclockwise)

Preceding gene: 158317201

Following gene: 158317195

Centisome position: 73.33

GC content: 67.94

Gene sequence:

>1257_bases
ATGTCGTATGACTCGACAGCGGCAAGCGGGGAGCGCGCCGGACCGGCCGGTGAATCGATCGATGACGACTGGTGCCGGAA
CCAGTTCGATCACCTGTCGCAGGAACTCGTCGACAACCTGTACCCGGCCCTGACGCGGATGCGATCGTTATGCCCGGTGA
CCCATAGCAACCAGTATGGCGGTTACTGGGTCGTCACCAAGTATGACGACGTCCTGCGGGTCGCCCAGGAGTGGGAGACG
TTCTCCTCGGCGTTCGGGCTGACGGTGCCCCCCAGCCCGATCGCGACGCGGAACCTGCCGGTGGAGATCGACCCGCCGCT
GCAACGTGAGTTCAAGCGGCTGATCAACGCCTACTTCACGCCGAAGGCCGTGCGGCCGTGGGAGCCCCGGACCAGGGCGT
TGGTGAACCGCCTGATCGACGGTTTCGTCGAGCGCGGCGAGTGCGACTTCATGGCCGAGTTCGCCCGGCCCTACCCGGCT
CTTTCCTTCTTCGACGTCGCGATCGGCGCACCCGCCGACCAGATCGAGCGGGTCGCCTATCTGGCCTCGAAGTCCGGCGC
CCCGAAGGATCCCGACGCGGCGGCATGCTGGCGCGGCCTGTCCGAGTGGATCAACGGGTTCCTCGAGCAGCGGCGGTGCG
AGCCACCGCGCGGCGACGTCGTCGATGCCATTCTCAGCGCCGAGATTCAGGGCCGGCCGATCACGCACGAGGAGATCATC
GGCACGGTGCAGCTGCTGATCCTCGGCGGGTTGGAGACGACGGCCGGGGCGCTCGGGCAGATCATGCTCCGGTTCTGCCG
CCAGCCGGAGATCCCGGCCGCGCTGCGCGAGAACCCCGACCTGCTGCCGCAGGCCGTGGAGGAGCTGTTACGCCTCGACG
GCCCGTTCGTCCAGATCACCCGCACCGCCATGCATGACACCGAGATCGACGGCCATCAGATCAAGCAGGGCGAGAAGGTC
ATCATCTACTGGGCCTCGGCGAACCGGGACGAGGGCGAGTTCCCCGCCTCCGACGAGTTCGACCTGGACCGGAAGATCAA
TCGGCACGTGGCCTTCGGCGTGGGGCCCCACCGCTGCGTTGGCTCCAACCTGGCCCGGATGAACCTGCGCATCGCCCTCG
ACGAGCTGCTCAGGCGGCTCCACGACCTCCGGCTGCGAGACGGCGCCGAGATCCACTTCCATCCGACGGTGAACCGGGCG
CCGGTCGCCGTTCCGGTCACGTTCACCCCCGGTCCCCGGGTCGGCGCCGATGGGTAA

Upstream 100 bases:

>100_bases
CGCGGGGGCGGTGACCGCCCTGGCCACCCTGGACCGCCCGGCGCCGACGACGTAATCTTCGAACGCGATCGCCGCGTACC
GCTACCGGTGAGGAGATTCC

Downstream 100 bases:

>100_bases
CCCGCCCCGCGCGGGCCTGCCGACCTCGCACGGCATCGAGCACCTGAACATCACCGTCGCCGACCTCGACGAGGCGACCG
CGTTCTTCACGGACGTCTTC

Product: cytochrome P450

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSYDSTAASGERAGPAGESIDDDWCRNQFDHLSQELVDNLYPALTRMRSLCPVTHSNQYGGYWVVTKYDDVLRVAQEWET
FSSAFGLTVPPSPIATRNLPVEIDPPLQREFKRLINAYFTPKAVRPWEPRTRALVNRLIDGFVERGECDFMAEFARPYPA
LSFFDVAIGAPADQIERVAYLASKSGAPKDPDAAACWRGLSEWINGFLEQRRCEPPRGDVVDAILSAEIQGRPITHEEII
GTVQLLILGGLETTAGALGQIMLRFCRQPEIPAALRENPDLLPQAVEELLRLDGPFVQITRTAMHDTEIDGHQIKQGEKV
IIYWASANRDEGEFPASDEFDLDRKINRHVAFGVGPHRCVGSNLARMNLRIALDELLRRLHDLRLRDGAEIHFHPTVNRA
PVAVPVTFTPGPRVGADG

Sequences:

>Translated_418_residues
MSYDSTAASGERAGPAGESIDDDWCRNQFDHLSQELVDNLYPALTRMRSLCPVTHSNQYGGYWVVTKYDDVLRVAQEWET
FSSAFGLTVPPSPIATRNLPVEIDPPLQREFKRLINAYFTPKAVRPWEPRTRALVNRLIDGFVERGECDFMAEFARPYPA
LSFFDVAIGAPADQIERVAYLASKSGAPKDPDAAACWRGLSEWINGFLEQRRCEPPRGDVVDAILSAEIQGRPITHEEII
GTVQLLILGGLETTAGALGQIMLRFCRQPEIPAALRENPDLLPQAVEELLRLDGPFVQITRTAMHDTEIDGHQIKQGEKV
IIYWASANRDEGEFPASDEFDLDRKINRHVAFGVGPHRCVGSNLARMNLRIALDELLRRLHDLRLRDGAEIHFHPTVNRA
PVAVPVTFTPGPRVGADG
>Mature_417_residues
SYDSTAASGERAGPAGESIDDDWCRNQFDHLSQELVDNLYPALTRMRSLCPVTHSNQYGGYWVVTKYDDVLRVAQEWETF
SSAFGLTVPPSPIATRNLPVEIDPPLQREFKRLINAYFTPKAVRPWEPRTRALVNRLIDGFVERGECDFMAEFARPYPAL
SFFDVAIGAPADQIERVAYLASKSGAPKDPDAAACWRGLSEWINGFLEQRRCEPPRGDVVDAILSAEIQGRPITHEEIIG
TVQLLILGGLETTAGALGQIMLRFCRQPEIPAALRENPDLLPQAVEELLRLDGPFVQITRTAMHDTEIDGHQIKQGEKVI
IYWASANRDEGEFPASDEFDLDRKINRHVAFGVGPHRCVGSNLARMNLRIALDELLRRLHDLRLRDGAEIHFHPTVNRAP
VAVPVTFTPGPRVGADG

Specific function: Unknown

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

Organism=Drosophila melanogaster, GI17933518, Length=208, Percent_Identity=26.9230769230769, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397
- InterPro:   IPR017972 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 46655; Mature: 46524

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDSTAASGERAGPAGESIDDDWCRNQFDHLSQELVDNLYPALTRMRSLCPVTHSNQYG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GYWVVTKYDDVLRVAQEWETFSSAFGLTVPPSPIATRNLPVEIDPPLQREFKRLINAYFT
CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCC
PKAVRPWEPRTRALVNRLIDGFVERGECDFMAEFARPYPALSFFDVAIGAPADQIERVAY
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
LASKSGAPKDPDAAACWRGLSEWINGFLEQRRCEPPRGDVVDAILSAEIQGRPITHEEII
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
GTVQLLILGGLETTAGALGQIMLRFCRQPEIPAALRENPDLLPQAVEELLRLDGPFVQIT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEE
RTAMHDTEIDGHQIKQGEKVIIYWASANRDEGEFPASDEFDLDRKINRHVAFGVGPHRCV
HHHHHCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCEEEECCCCHHHH
GSNLARMNLRIALDELLRRLHDLRLRDGAEIHFHPTVNRAPVAVPVTFTPGPRVGADG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SYDSTAASGERAGPAGESIDDDWCRNQFDHLSQELVDNLYPALTRMRSLCPVTHSNQYG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GYWVVTKYDDVLRVAQEWETFSSAFGLTVPPSPIATRNLPVEIDPPLQREFKRLINAYFT
CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCC
PKAVRPWEPRTRALVNRLIDGFVERGECDFMAEFARPYPALSFFDVAIGAPADQIERVAY
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
LASKSGAPKDPDAAACWRGLSEWINGFLEQRRCEPPRGDVVDAILSAEIQGRPITHEEII
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
GTVQLLILGGLETTAGALGQIMLRFCRQPEIPAALRENPDLLPQAVEELLRLDGPFVQIT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEE
RTAMHDTEIDGHQIKQGEKVIIYWASANRDEGEFPASDEFDLDRKINRHVAFGVGPHRCV
HHHHHCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCEEEECCCCHHHH
GSNLARMNLRIALDELLRRLHDLRLRDGAEIHFHPTVNRAPVAVPVTFTPGPRVGADG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]