| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317191
Identifier: 158317191
GI number: 158317191
Start: 6579199
End: 6581511
Strand: Reverse
Name: 158317191
Synonym: Franean1_5438
Alternate gene names: NA
Gene position: 6581511-6579199 (Counterclockwise)
Preceding gene: 158317195
Following gene: 158317190
Centisome position: 73.27
GC content: 68.91
Gene sequence:
>2313_bases ATGCTGCACGGGCCCATTACGCATGTGCCGTGGACAGATGTAACGTTCATCTGTCCACGGCATCCCCAGGGCATGTGCAG AGACCTCCTGGGGACGTCGACTACTGCCGATTCGGGGGAACAGGCAGGTGACCCGGTGATCGCATCACAGGCGAACGCAC CCAGCGAAGAACTCGTCGCCAGAATTTTCGGTCCGAACGAACGCTGGGGCTGGGAATACGTGCCCCCGCATCCCGCGACG GCGCACCACGAGGCCTTCCAGCCGCCGTCGCGGATCCAGATTCCGGTGCCCGACCTGCGGGCGCTCGAGTTCCGCAAGCG ACAGTTGTCAGGGAAGATCTGGCGGCCGATCGTCGGCGGTCTGTTCCTGCTCGGCGGGCTCGGGACGCTTGCCGGATCAG TAGGCGGCCTCGGTCCTCTCCTCATCGGCGTCGTCCTGCTCGCCTGGTATTTTGTACCGATTCAGACGGTCAGCAATCAA ATGAAGTCCATCCAGGCGGGCTACCAGGCGGAGATCGCCCGCCGCGAGCAGGACTACCAGGTCGCCTATGCCGCCTGGCA GCAACGCATCCACCAGCACGACCAGGCCGAGCAATACCGGGTCGGATCGGCGCTGGAGTTCTATCCGTTGGATCCGCAGC GCCCGGCGCGGATCGACGTCTTCGGTGGCACCGGCGCCGGCTGGACAAGCCTGCTGGCCACCGGCGGGACGTCGCTGCTC GCGGGCGGGTCCGGAATTCTGCTGCTCGACCTGTCGGAGCTCAGCGTCGGCGCCGGCCTGGTCATGCTGGCCAACAACGC GGCCACGCCGATCTCGGTCGACGTCCGGGAGCTGCCCGGCTCGCTGGAACGGATCGGCCTGCTCGGGGAGCTCGACCTGC GGCAGGTCGCCGAGCTGCTCGCCGACGCCTTCGACGCGGACCGCCGGGGCGGGGGGGACCAGAGCCTGCGCGCGATCGAC TTCAACATCCTGCGCAGCGTTGCCTCCTCGATTGAGGCGCCGCTGACCTTCGCCCGGCTCGCCGCCGCGTTGCGCATCCT CGACAACCAGAGTTCGGCCGTCGGCGAGGGCGTGTTCAGCGACTACGAGGTCCAGGCGCTGCAGCAGCGAATGTATGACC TCGGCCAGCGGGAGCGCACGGCCGACCAGATCAGCTTCCTGCGCACGGAGTTGGAGACGCTCGCCGGCTCCGACCCCACG GCGGCCGATGTCCCGCCGGCCGCACCGTCGGCCTGGTGGCCGGGCGGCGGGCTGCGGGTGCTGGCGACGACAAGCTCGGG GCGCGGCAGCTCCAAGCGGCGCAAGCTGCTCACCGACCGGATTCTGGTCGAGCGGTTGCTGCACCAGCTGCGCAGTCACG AGCGCGCCGCTTCCAACGACGTCGTCGTGATCGCCGGCGCCGACCACCTCGGCCGGGAAACACTGACGACGCTGACCCGG CAGGCGGAGGTCGCCCACGTCCGGCTCGTCCTGCTGTTCAAGAACCTCAGTGACGACGCGGAAAGGCTGATCGGCACCGG CGACAGCGCGGCGATCTTCATGCGGCTGGGTAACGCCCGGGAGGCCTCAAGCGCGGCCGATCACATCGGTAAGGGCTTCA GTTTCGTGCTCTCCCAGGTCACCAACCAGATCGGCGACAGCTTCACCGAAGGGTTCGCCAACAGCTACGGCGAGCAGGAC GGCACCGCGTTCACCCGGGGAGAGGGCCGCACCAGCGGTTCCGGCCCCGGCGGCGGAAGCAGCGGCCGGAACTGGAACCA GTCGAGCACGACGTCGCATTCGTCGACGTGGACCAACACCGTCAACGTCTCCAACACGGTGAGCCGGAACCTCGGCACGA CTCTGCAGCGGGAGAAGGACTACACCGTCGAGCCGACCGTGCTGCAGAGCCTGGCCGCGACCGCGTTCATCCTGGTGGGC ACGTCCAGCGGTTCCGGTCGGGTCCGCCCCGGCGACTGCAACCCAGGTCTTTTGCTGCTGCCCAAGGTCGCGGACAGTCC CCGGGACCTCACCGCAGCGCCGCACACCCACGAGGCGGGGGACCCGAACCAGGGCGGCGCCACCGCCACGCACCCGGGCC CGGTGTCACAGCGGGAGTTCCAACATCAGCTGCCGCCGGGGTACTCGCACCCTCAGTCGGGCTACCCGCAGCAGCAGCCG GGCTACCAGCACACTCAGCCGGCCTATCCGCAGCAGCAGCCGGGCTACCCACCGTCGGGCTACCCACCGTCGGGCTACCC GCCGTCGGGTTACCCGCAGCAGCAGCCCGGCTATCCGCAACAGCCGCCACACACCTGGCCGGGACAGCAGTAG
Upstream 100 bases:
>100_bases GTGAGCCATCCTCGGTTTTCAGCGAGCTGCGCCGAGTCGGCGAGCGCATTTCCGCAGGTAGACGAGTACCGGCCACAGAT CTGCGACGAGGCCCGGCTTG
Downstream 100 bases:
>100_bases CCGGGGGCAGGAATGCTGGACGGTTTCCGCTTCCACAGGCTGCTTTCCGCCCCCCGCCCGCCGGACCCGTCGCAGCGGCC CGACCCGGCGCCAGCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MLHGPITHVPWTDVTFICPRHPQGMCRDLLGTSTTADSGEQAGDPVIASQANAPSEELVARIFGPNERWGWEYVPPHPAT AHHEAFQPPSRIQIPVPDLRALEFRKRQLSGKIWRPIVGGLFLLGGLGTLAGSVGGLGPLLIGVVLLAWYFVPIQTVSNQ MKSIQAGYQAEIARREQDYQVAYAAWQQRIHQHDQAEQYRVGSALEFYPLDPQRPARIDVFGGTGAGWTSLLATGGTSLL AGGSGILLLDLSELSVGAGLVMLANNAATPISVDVRELPGSLERIGLLGELDLRQVAELLADAFDADRRGGGDQSLRAID FNILRSVASSIEAPLTFARLAAALRILDNQSSAVGEGVFSDYEVQALQQRMYDLGQRERTADQISFLRTELETLAGSDPT AADVPPAAPSAWWPGGGLRVLATTSSGRGSSKRRKLLTDRILVERLLHQLRSHERAASNDVVVIAGADHLGRETLTTLTR QAEVAHVRLVLLFKNLSDDAERLIGTGDSAAIFMRLGNAREASSAADHIGKGFSFVLSQVTNQIGDSFTEGFANSYGEQD GTAFTRGEGRTSGSGPGGGSSGRNWNQSSTTSHSSTWTNTVNVSNTVSRNLGTTLQREKDYTVEPTVLQSLAATAFILVG TSSGSGRVRPGDCNPGLLLLPKVADSPRDLTAAPHTHEAGDPNQGGATATHPGPVSQREFQHQLPPGYSHPQSGYPQQQP GYQHTQPAYPQQQPGYPPSGYPPSGYPPSGYPQQQPGYPQQPPHTWPGQQ
Sequences:
>Translated_770_residues MLHGPITHVPWTDVTFICPRHPQGMCRDLLGTSTTADSGEQAGDPVIASQANAPSEELVARIFGPNERWGWEYVPPHPAT AHHEAFQPPSRIQIPVPDLRALEFRKRQLSGKIWRPIVGGLFLLGGLGTLAGSVGGLGPLLIGVVLLAWYFVPIQTVSNQ MKSIQAGYQAEIARREQDYQVAYAAWQQRIHQHDQAEQYRVGSALEFYPLDPQRPARIDVFGGTGAGWTSLLATGGTSLL AGGSGILLLDLSELSVGAGLVMLANNAATPISVDVRELPGSLERIGLLGELDLRQVAELLADAFDADRRGGGDQSLRAID FNILRSVASSIEAPLTFARLAAALRILDNQSSAVGEGVFSDYEVQALQQRMYDLGQRERTADQISFLRTELETLAGSDPT AADVPPAAPSAWWPGGGLRVLATTSSGRGSSKRRKLLTDRILVERLLHQLRSHERAASNDVVVIAGADHLGRETLTTLTR QAEVAHVRLVLLFKNLSDDAERLIGTGDSAAIFMRLGNAREASSAADHIGKGFSFVLSQVTNQIGDSFTEGFANSYGEQD GTAFTRGEGRTSGSGPGGGSSGRNWNQSSTTSHSSTWTNTVNVSNTVSRNLGTTLQREKDYTVEPTVLQSLAATAFILVG TSSGSGRVRPGDCNPGLLLLPKVADSPRDLTAAPHTHEAGDPNQGGATATHPGPVSQREFQHQLPPGYSHPQSGYPQQQP GYQHTQPAYPQQQPGYPPSGYPPSGYPPSGYPQQQPGYPQQPPHTWPGQQ >Mature_770_residues MLHGPITHVPWTDVTFICPRHPQGMCRDLLGTSTTADSGEQAGDPVIASQANAPSEELVARIFGPNERWGWEYVPPHPAT AHHEAFQPPSRIQIPVPDLRALEFRKRQLSGKIWRPIVGGLFLLGGLGTLAGSVGGLGPLLIGVVLLAWYFVPIQTVSNQ MKSIQAGYQAEIARREQDYQVAYAAWQQRIHQHDQAEQYRVGSALEFYPLDPQRPARIDVFGGTGAGWTSLLATGGTSLL AGGSGILLLDLSELSVGAGLVMLANNAATPISVDVRELPGSLERIGLLGELDLRQVAELLADAFDADRRGGGDQSLRAID FNILRSVASSIEAPLTFARLAAALRILDNQSSAVGEGVFSDYEVQALQQRMYDLGQRERTADQISFLRTELETLAGSDPT AADVPPAAPSAWWPGGGLRVLATTSSGRGSSKRRKLLTDRILVERLLHQLRSHERAASNDVVVIAGADHLGRETLTTLTR QAEVAHVRLVLLFKNLSDDAERLIGTGDSAAIFMRLGNAREASSAADHIGKGFSFVLSQVTNQIGDSFTEGFANSYGEQD GTAFTRGEGRTSGSGPGGGSSGRNWNQSSTTSHSSTWTNTVNVSNTVSRNLGTTLQREKDYTVEPTVLQSLAATAFILVG TSSGSGRVRPGDCNPGLLLLPKVADSPRDLTAAPHTHEAGDPNQGGATATHPGPVSQREFQHQLPPGYSHPQSGYPQQQP GYQHTQPAYPQQQPGYPPSGYPPSGYPPSGYPQQQPGYPQQPPHTWPGQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82525; Mature: 82525
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHGPITHVPWTDVTFICPRHPQGMCRDLLGTSTTADSGEQAGDPVIASQANAPSEELVA CCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHH RIFGPNERWGWEYVPPHPATAHHEAFQPPSRIQIPVPDLRALEFRKRQLSGKIWRPIVGG HHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHH LFLLGGLGTLAGSVGGLGPLLIGVVLLAWYFVPIQTVSNQMKSIQAGYQAEIARREQDYQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VAYAAWQQRIHQHDQAEQYRVGSALEFYPLDPQRPARIDVFGGTGAGWTSLLATGGTSLL HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCEE AGGSGILLLDLSELSVGAGLVMLANNAATPISVDVRELPGSLERIGLLGELDLRQVAELL ECCCCEEEEEEHHHCCCCCEEEEECCCCCCEEEEHHHCCCHHHHHCCCCCCCHHHHHHHH ADAFDADRRGGGDQSLRAIDFNILRSVASSIEAPLTFARLAAALRILDNQSSAVGEGVFS HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCC DYEVQALQQRMYDLGQRERTADQISFLRTELETLAGSDPTAADVPPAAPSAWWPGGGLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE LATTSSGRGSSKRRKLLTDRILVERLLHQLRSHERAASNDVVVIAGADHLGRETLTTLTR EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH QAEVAHVRLVLLFKNLSDDAERLIGTGDSAAIFMRLGNAREASSAADHIGKGFSFVLSQV HHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHH TNQIGDSFTEGFANSYGEQDGTAFTRGEGRTSGSGPGGGSSGRNWNQSSTTSHSSTWTNT HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VNVSNTVSRNLGTTLQREKDYTVEPTVLQSLAATAFILVGTSSGSGRVRPGDCNPGLLLL EECCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEE PKVADSPRDLTAAPHTHEAGDPNQGGATATHPGPVSQREFQHQLPPGYSHPQSGYPQQQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC GYQHTQPAYPQQQPGYPPSGYPPSGYPPSGYPQQQPGYPQQPPHTWPGQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHGPITHVPWTDVTFICPRHPQGMCRDLLGTSTTADSGEQAGDPVIASQANAPSEELVA CCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHH RIFGPNERWGWEYVPPHPATAHHEAFQPPSRIQIPVPDLRALEFRKRQLSGKIWRPIVGG HHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHH LFLLGGLGTLAGSVGGLGPLLIGVVLLAWYFVPIQTVSNQMKSIQAGYQAEIARREQDYQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VAYAAWQQRIHQHDQAEQYRVGSALEFYPLDPQRPARIDVFGGTGAGWTSLLATGGTSLL HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCEE AGGSGILLLDLSELSVGAGLVMLANNAATPISVDVRELPGSLERIGLLGELDLRQVAELL ECCCCEEEEEEHHHCCCCCEEEEECCCCCCEEEEHHHCCCHHHHHCCCCCCCHHHHHHHH ADAFDADRRGGGDQSLRAIDFNILRSVASSIEAPLTFARLAAALRILDNQSSAVGEGVFS HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCC DYEVQALQQRMYDLGQRERTADQISFLRTELETLAGSDPTAADVPPAAPSAWWPGGGLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE LATTSSGRGSSKRRKLLTDRILVERLLHQLRSHERAASNDVVVIAGADHLGRETLTTLTR EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH QAEVAHVRLVLLFKNLSDDAERLIGTGDSAAIFMRLGNAREASSAADHIGKGFSFVLSQV HHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHH TNQIGDSFTEGFANSYGEQDGTAFTRGEGRTSGSGPGGGSSGRNWNQSSTTSHSSTWTNT HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VNVSNTVSRNLGTTLQREKDYTVEPTVLQSLAATAFILVGTSSGSGRVRPGDCNPGLLLL EECCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEE PKVADSPRDLTAAPHTHEAGDPNQGGATATHPGPVSQREFQHQLPPGYSHPQSGYPQQQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC GYQHTQPAYPQQQPGYPPSGYPPSGYPPSGYPQQQPGYPQQPPHTWPGQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA