| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317181
Identifier: 158317181
GI number: 158317181
Start: 6566850
End: 6567677
Strand: Direct
Name: 158317181
Synonym: Franean1_5428
Alternate gene names: NA
Gene position: 6566850-6567677 (Clockwise)
Preceding gene: 158317180
Following gene: 158317182
Centisome position: 73.11
GC content: 70.41
Gene sequence:
>828_bases ATGGTGACTCTTGGACCGATCGGTATCGCGGCTTCCGGGCTCGCGGCGGACCATCCCGACGCCCAGATCGATCTCGCGCG GAAAGCGGAGGCCGCGGGCTACTCAACCGTCTGGCTGGCCGGTGGCCAGGGAAACAACCTGCCTGCCATCGACCGGGTCG TGCGTGCGACGGAGCACATCCAGGTGGCCAGCGGCATCCTTTCGGTGGACGTCGTACCGGCCCGCGAGGTGGCGCAAAGC TACACGGACCTCGAGAAGTCCGCACCGGGCAGGTTCGTCGTCGGCCTCGGCGGCGCGCATGGCCCCAAGCCCCTGCGAAC GCTCAACTCCTACCTGGACGACCTCGACACCGAAGCCCCTGTCGTACCCGCGGCCTCGCGCGTGCTCGCCGCACTCGGCC CGGCGGTCCTCGCCCTCGCCCGGGACCGCGCGGCCGGCGCCTACCCGTACCTGGTGACCCCTGAATATGTCGAGCAGGCG CGGGCGACGCTCGGCCCGGGCGCGGCACTGGCTGTGCTGCTGACGGTCGTGCCCGAGAGCGATCCGGCCACCGCACGGGC CGCGGCCGCCGAAGGGCTGCAGTTCCTTCGCACGGTGCCGGGTTACCACCGCAACTTCCTCCGCATGGGATTCACGGACT CCGAGATCGCCGACCTCGACGCCAGATTCGTCGACGCGGTGACCGCCTGGGGGGATCTCGACACGATCGTCACCCGCATC CGTGAGTACCACACCGCCGGCGCCGACCAGGTCGTCCTGCGTCTCAGCGGCGAAGCCGAGTTCTTCGACCGCTGGCTCCA CCGGTTCGCCGAGGCGTTGCTGCCCTGA
Upstream 100 bases:
>100_bases TCCCGTCGTCAATCATTCGCCCATCACCACGGCCATCACCACGGCGGGGCGAGGCGAGGCGTGCGGAACACGGAAGGCCT GCCGTGCGATTGTGCCAGTC
Downstream 100 bases:
>100_bases CCGACGGGCGGGCCAGCGAGTGGGCTCGCCCGTTCTGGGAGCATGGGTGGTGGCGGGCCCGTGCGAGGGTCAGGCGACGG CTGTCAGGCGGTGCGGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MVTLGPIGIAASGLAADHPDAQIDLARKAEAAGYSTVWLAGGQGNNLPAIDRVVRATEHIQVASGILSVDVVPAREVAQS YTDLEKSAPGRFVVGLGGAHGPKPLRTLNSYLDDLDTEAPVVPAASRVLAALGPAVLALARDRAAGAYPYLVTPEYVEQA RATLGPGAALAVLLTVVPESDPATARAAAAEGLQFLRTVPGYHRNFLRMGFTDSEIADLDARFVDAVTAWGDLDTIVTRI REYHTAGADQVVLRLSGEAEFFDRWLHRFAEALLP
Sequences:
>Translated_275_residues MVTLGPIGIAASGLAADHPDAQIDLARKAEAAGYSTVWLAGGQGNNLPAIDRVVRATEHIQVASGILSVDVVPAREVAQS YTDLEKSAPGRFVVGLGGAHGPKPLRTLNSYLDDLDTEAPVVPAASRVLAALGPAVLALARDRAAGAYPYLVTPEYVEQA RATLGPGAALAVLLTVVPESDPATARAAAAEGLQFLRTVPGYHRNFLRMGFTDSEIADLDARFVDAVTAWGDLDTIVTRI REYHTAGADQVVLRLSGEAEFFDRWLHRFAEALLP >Mature_275_residues MVTLGPIGIAASGLAADHPDAQIDLARKAEAAGYSTVWLAGGQGNNLPAIDRVVRATEHIQVASGILSVDVVPAREVAQS YTDLEKSAPGRFVVGLGGAHGPKPLRTLNSYLDDLDTEAPVVPAASRVLAALGPAVLALARDRAAGAYPYLVTPEYVEQA RATLGPGAALAVLLTVVPESDPATARAAAAEGLQFLRTVPGYHRNFLRMGFTDSEIADLDARFVDAVTAWGDLDTIVTRI REYHTAGADQVVLRLSGEAEFFDRWLHRFAEALLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29055; Mature: 29055
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLGPIGIAASGLAADHPDAQIDLARKAEAAGYSTVWLAGGQGNNLPAIDRVVRATEHI CEEECCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH QVASGILSVDVVPAREVAQSYTDLEKSAPGRFVVGLGGAHGPKPLRTLNSYLDDLDTEAP HHHHCHHEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCC VVPAASRVLAALGPAVLALARDRAAGAYPYLVTPEYVEQARATLGPGAALAVLLTVVPES CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHCCCC DPATARAAAAEGLQFLRTVPGYHRNFLRMGFTDSEIADLDARFVDAVTAWGDLDTIVTRI CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH REYHTAGADQVVLRLSGEAEFFDRWLHRFAEALLP HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTLGPIGIAASGLAADHPDAQIDLARKAEAAGYSTVWLAGGQGNNLPAIDRVVRATEHI CEEECCCCHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH QVASGILSVDVVPAREVAQSYTDLEKSAPGRFVVGLGGAHGPKPLRTLNSYLDDLDTEAP HHHHCHHEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCC VVPAASRVLAALGPAVLALARDRAAGAYPYLVTPEYVEQARATLGPGAALAVLLTVVPES CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHCCCC DPATARAAAAEGLQFLRTVPGYHRNFLRMGFTDSEIADLDARFVDAVTAWGDLDTIVTRI CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH REYHTAGADQVVLRLSGEAEFFDRWLHRFAEALLP HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA