| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317134
Identifier: 158317134
GI number: 158317134
Start: 6489116
End: 6489742
Strand: Direct
Name: 158317134
Synonym: Franean1_5379
Alternate gene names: NA
Gene position: 6489116-6489742 (Clockwise)
Preceding gene: 158317133
Following gene: 158317135
Centisome position: 72.25
GC content: 67.62
Gene sequence:
>627_bases GTGAGTCCATCGTATGAGGGTCGCCAGATTGTGGGAATCGATCTCCATCGGCGGCGATCGGTGATCGTGCGGATGACCCC GGACGGGCACCCACCGGGAACGGTCCGGATCAGCAACGACCCCGCCACCCTCACCCGTGAGATCAGCCGTGCCGGTGAGC ACCCCGACGTGGTGCTGGAAGCAACCTACGGCTGGTACTGGGCGGCGGACGTGCTGGCCGCCACCGGCGCCCAGGTTCAC CTCGCACACCCGCTAGGCGTGAAGGGCTTCACCTACCGGCGGGTGAAGAACGACGTCCGCGACGCCACGGATCTCACGGG CCTGCTCCGCATGGGACGCCTACCCGAAACGTGGGCCGCTCCACCGCCGGTCCGGGAACTCCGCGAGACCGTCCGCCATC GTGCGGCGCTCGTCGCGATCCGGTCGGCGTGCAAGGCCCAGATCCACGCGGTCCTCGCCAAGAACGGTGTCGCGGTGCCC ATGACCGACCTGTTCGGCCAGGCCGACACCGACCCCCTCGAGCAGGTCCAGCTCCCCAGCCCGTTCCACTCGCGCTCGAC CAGCACACGGTCAAAATCGGCTCTCGCGTCGAGCGTGTCGATATCTATGCACCGGAACTTTCTCTGA
Upstream 100 bases:
>100_bases GTTGATGCGATGAAGGGGCGGGGCCTCCGCTCCTGGTGACGCCCCGGGGTCGGGGTAGGTCCCTCGGGGTTGCTCACCTC TACCGACGAAGGAGGCCCCT
Downstream 100 bases:
>100_bases TCCTAGAGTTTGACGGCTCCTATTGGCATGATGGTCGGGAGATGCAGGACGCCGCCAAGTCTCGACGTCTCGCAGACGCA GCCGCCGTCGTTGTGCGTAT
Product: putative transposase for insertion sequence element
Products: NA
Alternate protein names: Transposase For Insertion Sequence Element; Orf_Bo
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSPSYEGRQIVGIDLHRRRSVIVRMTPDGHPPGTVRISNDPATLTREISRAGEHPDVVLEATYGWYWAADVLAATGAQVH LAHPLGVKGFTYRRVKNDVRDATDLTGLLRMGRLPETWAAPPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVP MTDLFGQADTDPLEQVQLPSPFHSRSTSTRSKSALASSVSISMHRNFL
Sequences:
>Translated_208_residues MSPSYEGRQIVGIDLHRRRSVIVRMTPDGHPPGTVRISNDPATLTREISRAGEHPDVVLEATYGWYWAADVLAATGAQVH LAHPLGVKGFTYRRVKNDVRDATDLTGLLRMGRLPETWAAPPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVP MTDLFGQADTDPLEQVQLPSPFHSRSTSTRSKSALASSVSISMHRNFL >Mature_207_residues SPSYEGRQIVGIDLHRRRSVIVRMTPDGHPPGTVRISNDPATLTREISRAGEHPDVVLEATYGWYWAADVLAATGAQVHL AHPLGVKGFTYRRVKNDVRDATDLTGLLRMGRLPETWAAPPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVPM TDLFGQADTDPLEQVQLPSPFHSRSTSTRSKSALASSVSISMHRNFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22825; Mature: 22694
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSYEGRQIVGIDLHRRRSVIVRMTPDGHPPGTVRISNDPATLTREISRAGEHPDVVLE CCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEE ATYGWYWAADVLAATGAQVHLAHPLGVKGFTYRRVKNDVRDATDLTGLLRMGRLPETWAA ECCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVPMTDLFGQADTDPLEQVQLPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCCCCCCCHHHHCCCCC PFHSRSTSTRSKSALASSVSISMHRNFL CCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPSYEGRQIVGIDLHRRRSVIVRMTPDGHPPGTVRISNDPATLTREISRAGEHPDVVLE CCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEE ATYGWYWAADVLAATGAQVHLAHPLGVKGFTYRRVKNDVRDATDLTGLLRMGRLPETWAA ECCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVPMTDLFGQADTDPLEQVQLPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCCCCCCCHHHHCCCCC PFHSRSTSTRSKSALASSVSISMHRNFL CCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA