Click here to switch to the map view.

The map label for this gene is 158317122

Identifier: 158317122

GI number: 158317122

Start: 6471467

End: 6472702

Strand: Reverse

Name: 158317122

Synonym: Franean1_5366

Alternate gene names: NA

Gene position: 6472702-6471467 (Counterclockwise)

Preceding gene: 158317123

Following gene: 158317121

Centisome position: 72.06

GC content: 70.71

Gene sequence:

>1236_bases
GTGACCAGGAGCGATGACCTGACGGTACTGGTGGGCGCGCTGCGTCGGGATCGGCGTCGTGACCCGCGCGCGGGTCGGCG
TGAGTACTCCCAGGCCGCGCTGGAGCTGGCCGATCGTTGTGAGCGGCTGCTGGCGGCGGGGAGCGCGAGTGCCGTGGCAC
CGGTGCTGCGCAAGGCGGTGGACCGGATGACCGGCGCGTTGATGTACATGGACGACTCGTCGGGGATCGTCGGCACGGAC
CTGCGCCACATGATGACCTTGTATGCCCATGCCTGCGCGGACGCCCCGCCGGATCCGACGGGGCTCGCGAGATGGTTGGC
GGCGCTGTCGTTCGACGGGCCGGGCTGGCCGGAGATCCGGCTGGTCGAGTTCGTGCCCGCCCTGGGCTCCCAGGGCCTGG
CCGCGCTGAATGCAGAAGTCGAACGGCGTGCCGCCACCGCTGAACCGGGGTCCTGGGGCCAGCTTGTCGCGGCCCGTGAC
CTGCGGGAACAGCTTGCCCAGGTCTCCGGCGACGTTGATCGACATGTCGCTGTCCTTGCCGAGAACCTCAACAGCGCCAG
CCAGTACCAGCGGATCGTCGTGGCCCTGCGGGACGCTGGCCGTCCCGCCGAGGCGATCGACTGGGCCCACCGCGGTCTGG
CCGACCATGACGGTGGGCCGCAGGCGGATCGTCTCCGTGACCTGCTGGTCGACCTGGAGATCGACGCCGGTGACCTGGCT
GCCGCTGTTGTCATACGTAGGGACGACTTCGAACGTCGGCCCACGGCGAACGCCTACCGGGCGTTGCTCGACACCGGCCG
GCGATGTGCGGCGGACACCGGACTCGCCGCGTGGGCGACGGCTGTTCTGCGCGCCCGGGTGGCCCGGCAATCGGCCTACG
CCGACGACCTGGTCGCCGTCCTGCTCGCCGAAGGCGAGACCGACCAGGCGTGGGAGGCCGGTCTCCACCACGCCGAGGTG
CTCTCCGATCGAAGGCTTGTCGAGCTCCTGGAGCTCCGGCGGACGAGCCATCCGGGCGATGTGCTGGCGCCCTACCGTGA
GCTGATCGAAACCCGCGTCCTCGCCGCGGCGGACAAACGCCGCTACCGGACCGCGATCAGCCTGCTCCGTGACCTCCGCG
AGACCCACCTCGCCATCGGCGACGCCGCCGGGTTCAGCGCCTACATCGACCATCTGCGTGCCGAACACAGGCGCCGGCCC
ACCTTCATCGCCCACCTCGATGCGGCCGGCCTGTAA

Upstream 100 bases:

>100_bases
GGACGCCGTGCCAGCCCCGGCGGCGTTCCTCGGTCCCGTCCGGCGTGGCGATTGCCAGCCGTGACCGTGGCGGGAGCCTC
CGGTCTGGTGGGATGGGAAG

Downstream 100 bases:

>100_bases
CCACGCGTCCCTTCGATCCGGCGGCCTGGTGATGTACGCGTCCGCCCTGGATGGCTCGATCTTTGCGGTCCCGGCGTCCG
GTGTAGCTGATGGATGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger SWIM-Type

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTRSDDLTVLVGALRRDRRRDPRAGRREYSQAALELADRCERLLAAGSASAVAPVLRKAVDRMTGALMYMDDSSGIVGTD
LRHMMTLYAHACADAPPDPTGLARWLAALSFDGPGWPEIRLVEFVPALGSQGLAALNAEVERRAATAEPGSWGQLVAARD
LREQLAQVSGDVDRHVAVLAENLNSASQYQRIVVALRDAGRPAEAIDWAHRGLADHDGGPQADRLRDLLVDLEIDAGDLA
AAVVIRRDDFERRPTANAYRALLDTGRRCAADTGLAAWATAVLRARVARQSAYADDLVAVLLAEGETDQAWEAGLHHAEV
LSDRRLVELLELRRTSHPGDVLAPYRELIETRVLAAADKRRYRTAISLLRDLRETHLAIGDAAGFSAYIDHLRAEHRRRP
TFIAHLDAAGL

Sequences:

>Translated_411_residues
MTRSDDLTVLVGALRRDRRRDPRAGRREYSQAALELADRCERLLAAGSASAVAPVLRKAVDRMTGALMYMDDSSGIVGTD
LRHMMTLYAHACADAPPDPTGLARWLAALSFDGPGWPEIRLVEFVPALGSQGLAALNAEVERRAATAEPGSWGQLVAARD
LREQLAQVSGDVDRHVAVLAENLNSASQYQRIVVALRDAGRPAEAIDWAHRGLADHDGGPQADRLRDLLVDLEIDAGDLA
AAVVIRRDDFERRPTANAYRALLDTGRRCAADTGLAAWATAVLRARVARQSAYADDLVAVLLAEGETDQAWEAGLHHAEV
LSDRRLVELLELRRTSHPGDVLAPYRELIETRVLAAADKRRYRTAISLLRDLRETHLAIGDAAGFSAYIDHLRAEHRRRP
TFIAHLDAAGL
>Mature_410_residues
TRSDDLTVLVGALRRDRRRDPRAGRREYSQAALELADRCERLLAAGSASAVAPVLRKAVDRMTGALMYMDDSSGIVGTDL
RHMMTLYAHACADAPPDPTGLARWLAALSFDGPGWPEIRLVEFVPALGSQGLAALNAEVERRAATAEPGSWGQLVAARDL
REQLAQVSGDVDRHVAVLAENLNSASQYQRIVVALRDAGRPAEAIDWAHRGLADHDGGPQADRLRDLLVDLEIDAGDLAA
AVVIRRDDFERRPTANAYRALLDTGRRCAADTGLAAWATAVLRARVARQSAYADDLVAVLLAEGETDQAWEAGLHHAEVL
SDRRLVELLELRRTSHPGDVLAPYRELIETRVLAAADKRRYRTAISLLRDLRETHLAIGDAAGFSAYIDHLRAEHRRRPT
FIAHLDAAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44916; Mature: 44785

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSDDLTVLVGALRRDRRRDPRAGRREYSQAALELADRCERLLAAGSASAVAPVLRKAV
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DRMTGALMYMDDSSGIVGTDLRHMMTLYAHACADAPPDPTGLARWLAALSFDGPGWPEIR
HHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEE
LVEFVPALGSQGLAALNAEVERRAATAEPGSWGQLVAARDLREQLAQVSGDVDRHVAVLA
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ENLNSASQYQRIVVALRDAGRPAEAIDWAHRGLADHDGGPQADRLRDLLVDLEIDAGDLA
HHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH
AAVVIRRDDFERRPTANAYRALLDTGRRCAADTGLAAWATAVLRARVARQSAYADDLVAV
HHHEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAEGETDQAWEAGLHHAEVLSDRRLVELLELRRTSHPGDVLAPYRELIETRVLAAADKR
HHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RYRTAISLLRDLRETHLAIGDAAGFSAYIDHLRAEHRRRPTFIAHLDAAGL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure 
TRSDDLTVLVGALRRDRRRDPRAGRREYSQAALELADRCERLLAAGSASAVAPVLRKAV
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DRMTGALMYMDDSSGIVGTDLRHMMTLYAHACADAPPDPTGLARWLAALSFDGPGWPEIR
HHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEE
LVEFVPALGSQGLAALNAEVERRAATAEPGSWGQLVAARDLREQLAQVSGDVDRHVAVLA
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ENLNSASQYQRIVVALRDAGRPAEAIDWAHRGLADHDGGPQADRLRDLLVDLEIDAGDLA
HHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH
AAVVIRRDDFERRPTANAYRALLDTGRRCAADTGLAAWATAVLRARVARQSAYADDLVAV
HHHEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAEGETDQAWEAGLHHAEVLSDRRLVELLELRRTSHPGDVLAPYRELIETRVLAAADKR
HHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RYRTAISLLRDLRETHLAIGDAAGFSAYIDHLRAEHRRRPTFIAHLDAAGL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA