| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317108
Identifier: 158317108
GI number: 158317108
Start: 6455601
End: 6456407
Strand: Reverse
Name: 158317108
Synonym: Franean1_5352
Alternate gene names: NA
Gene position: 6456407-6455601 (Counterclockwise)
Preceding gene: 158317109
Following gene: 158317107
Centisome position: 71.88
GC content: 70.51
Gene sequence:
>807_bases GTGGCCGCGAGCATCGAACGCGCACGGTCATGCTGGGAGCGGATGTCAGGAGATGGGGCCCGTAGTAGGAGATGCGGGCC CGTGGTATCAGTCAGCGTGTCCGAGTGGGACGAGACCCTCTACGGGGGTAGCGCCGAGTTCTACGCCGCCGGGCGGCTGC CCTATCCGCCCGCGCTTGCCGAGACCTTGCGCGCCGCGCTCGGGCACGCTCCCGTCGGGCGGCTGCTGGATGTCGGCTGC GGACCGGGCTCGCTGACCTTGCTGGTGGCCGGCCTCTTCGAAGCGGCCGTGGGCCTCGACCCCGATCCGGACATGATCTC CTATGCCCGTGCGGCGGCGCAGCGCGCGGGAACGGACAACGTGACCTGGGTGCGGATGCGTGCCGAGGACCTGCCAGGCG GGCTTGGAGTCTTCCGCGTTGTCAGCTTCGCCCAGTCGTTCCACTGGCTCGGCCGTCCCAGGGTCGCTGCCGCCGTCCAC CCGATGCTGGCACCGGACGGCAGGTGCGTGTTCGTCCACGCCACTACTCACGAAGGCGTTCCCGGTGACGACGTGCTGCC GCATCCCCGGCCGCCCCGGGAGGTGATCGCCTCGCTCGTCCGCGACTACCTCGGCCTGCACCGGCGGGCGGGGCGAAGCG TACTGCCCCAGGGCACCCCCTCAGGAGAGAACGACATCTTTCGGGCGGCGGGGTTAGGGACCCACCCTGCTGAACGTGGC CGGCGGCCTCGTCATCGAACGCAGCGCCGACGAGGTGATCGCCTCGGTGTTCTCGCTGTCCAGCACGGCCCCCCACCTGT TTGGTGA
Upstream 100 bases:
>100_bases TAGGCCACCGTCGCGTCTAGACACGGAGCTTCGGACGGAGCTGTGATTATCGGTGCGGGTGCGGGTGCGGGTGCGGGTGC GGCGTAGGTGGCGGTCTTCA
Downstream 100 bases:
>100_bases CCGGCGGGCGGCGTTCGAGCGCGACCTGCGCGGACTTCTGCGCGAGACCTCGGCTACCGGCCGCCGGTTCTCCGAGCGCA CCCGTGACATCAGGCTCGAA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; 3-Demethylubiquinone-9 3-Methyltransferase Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAASIERARSCWERMSGDGARSRRCGPVVSVSVSEWDETLYGGSAEFYAAGRLPYPPALAETLRAALGHAPVGRLLDVGC GPGSLTLLVAGLFEAAVGLDPDPDMISYARAAAQRAGTDNVTWVRMRAEDLPGGLGVFRVVSFAQSFHWLGRPRVAAAVH PMLAPDGRCVFVHATTHEGVPGDDVLPHPRPPREVIASLVRDYLGLHRRAGRSVLPQGTPSGENDIFRAAGLGTHPAERG RRPRHRTQRRRGDRLGVLAVQHGPPPVW
Sequences:
>Translated_268_residues MAASIERARSCWERMSGDGARSRRCGPVVSVSVSEWDETLYGGSAEFYAAGRLPYPPALAETLRAALGHAPVGRLLDVGC GPGSLTLLVAGLFEAAVGLDPDPDMISYARAAAQRAGTDNVTWVRMRAEDLPGGLGVFRVVSFAQSFHWLGRPRVAAAVH PMLAPDGRCVFVHATTHEGVPGDDVLPHPRPPREVIASLVRDYLGLHRRAGRSVLPQGTPSGENDIFRAAGLGTHPAERG RRPRHRTQRRRGDRLGVLAVQHGPPPVW >Mature_267_residues AASIERARSCWERMSGDGARSRRCGPVVSVSVSEWDETLYGGSAEFYAAGRLPYPPALAETLRAALGHAPVGRLLDVGCG PGSLTLLVAGLFEAAVGLDPDPDMISYARAAAQRAGTDNVTWVRMRAEDLPGGLGVFRVVSFAQSFHWLGRPRVAAAVHP MLAPDGRCVFVHATTHEGVPGDDVLPHPRPPREVIASLVRDYLGLHRRAGRSVLPQGTPSGENDIFRAAGLGTHPAERGR RPRHRTQRRRGDRLGVLAVQHGPPPVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28828; Mature: 28697
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASIERARSCWERMSGDGARSRRCGPVVSVSVSEWDETLYGGSAEFYAAGRLPYPPALA CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCEEECCCCCCCHHHH ETLRAALGHAPVGRLLDVGCGPGSLTLLVAGLFEAAVGLDPDPDMISYARAAAQRAGTDN HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC VTWVRMRAEDLPGGLGVFRVVSFAQSFHWLGRPRVAAAVHPMLAPDGRCVFVHATTHEGV EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCC PGDDVLPHPRPPREVIASLVRDYLGLHRRAGRSVLPQGTPSGENDIFRAAGLGTHPAERG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCHHHC RRPRHRTQRRRGDRLGVLAVQHGPPPVW CCCHHHHHHHCCCCEEEEEEECCCCCCC >Mature Secondary Structure AASIERARSCWERMSGDGARSRRCGPVVSVSVSEWDETLYGGSAEFYAAGRLPYPPALA CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCEEECCCCCCCHHHH ETLRAALGHAPVGRLLDVGCGPGSLTLLVAGLFEAAVGLDPDPDMISYARAAAQRAGTDN HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC VTWVRMRAEDLPGGLGVFRVVSFAQSFHWLGRPRVAAAVHPMLAPDGRCVFVHATTHEGV EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCC PGDDVLPHPRPPREVIASLVRDYLGLHRRAGRSVLPQGTPSGENDIFRAAGLGTHPAERG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCHHHC RRPRHRTQRRRGDRLGVLAVQHGPPPVW CCCHHHHHHHCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA