| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317092
Identifier: 158317092
GI number: 158317092
Start: 6431591
End: 6432943
Strand: Reverse
Name: 158317092
Synonym: Franean1_5336
Alternate gene names: NA
Gene position: 6432943-6431591 (Counterclockwise)
Preceding gene: 158317094
Following gene: 158317091
Centisome position: 71.62
GC content: 65.26
Gene sequence:
>1353_bases ATGCAGTCCACCGGCGTCCGTCCCTGTCCGCTGGCGTCCGTGGCTGTTGCTACAGAGGTAGCTACACCTGGCGGGGCCTC CGACGCCCGGTGCCTGGACGAACCTTCCTCCGGCCTGGGTAGCCTGCGTGCCGTGGACGATAAGTCACAGGTCGTTCCGT TTGTCGACCTCCCCACCGCCGCCCTTGTAGTCGATCAGCTGTATGAGGGGGGCACGGCGGGCACCCTTGCCGATGACCCT CTGGCGCGGCTGCTGCCTGTCGGCAACCAAGGAGGGTTTCGGTACGCGGGCTCCCCCCGCAAAGGCACCGTCCGTCTCTC GGTGCTTTACACCACCGGGGCAGTAGCAGACTGGCCAGACACTCTCGATCCCTCGACCGGGGTCTTCACCTACTACGGCG ACAACCGCAAACCAGGTCGGGACCTGCACGATACCCAACGTTCTGGCAACCTCCTCCTGCGTGACGTGTTTGAACACGCC CACGGCAGCGTGGAGGAACGCCGTACAGTCCCGCCGTTCCTGCTGTTCGAAACAGCGCCACCGGGACGGCGCATCATGTT CCGTGGCCTACTTGCCCCCGGCGCGGCCACCCTCACCAGCGACGACGATCTCGTCGCGATCTGGCGTAACACCCGCGGAC ACCGCTTCCAAAACTACCGCGCCCACTTCACCGTGCTCGACGTCGCGACCGTCACCCGCACCTGGCTAACCGACATCCTC GCCGGACACGCTACCGACAGCGAGCACTGCCCACCTGCGTGGACAGCCTGGGTCGACGGTCGCGCCTACAGCCCGTTGAT CGCACCTTCGACCACCATCATCCGGACCAAAGCAGAACAGCAACCCCCCGACCCTACCGGGGTAGCGATACTCGCCGCCA TCCGCGAGCACTACCGGGGACACGAACACGACTTCGAGTTCTGCGCGGTCGAGCTGTGGCGACTCATCGCGCCAGCCACT GGCAGATGTGATGTCACCCCGCCGAGTCGGGACGGGGGCCGCGACGCCATCGGCGACTACATCCTCGGCCCACTCTCTGA CCCGATCGCCATCGACTTCGCTTTGGAAGCCAAGTGCTACACCGACACCAACTCCGTCGGCGTCCGAGATGTCGCCCGGC TGATCTCCCGGCTACGCCACCGCCACTTCGGCGTCTTCATCACCACCTCCCACTTCAACCAGCAGGTCTACACCGAAGTA CGCACCGACCGGCACCCCATCGCCCTGGTCAGCGGACGCGACATCGTCAATGCCCTCCGCGCCCACGGCTACGCGGACGT CAACGCCGTCAACGCATGGTTAGGCAAGATCCCGAATGTCCATGTCTCCGCGAAGGGAGCACCTAATCCGTAG
Upstream 100 bases:
>100_bases GGTCAGAGGGCCGATTTGTGCGCCCGGCAGGGATCGAACCTGCGACCCAGTGCTTAGAAGGCACGAAAAGCATCAGGTGC CTCGGGGGTCAGCCCTGCCC
Downstream 100 bases:
>100_bases TTAGATATGGATCTTCCGCCGACGTCCGTTCAGTCCGCTGACCTCGCACACTCCGTCCGCTGGCGTCCGCCTACGTGCAC CCTCGTCCGCCGGCTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Restriction Endonuclease Superfamily Protein
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MQSTGVRPCPLASVAVATEVATPGGASDARCLDEPSSGLGSLRAVDDKSQVVPFVDLPTAALVVDQLYEGGTAGTLADDP LARLLPVGNQGGFRYAGSPRKGTVRLSVLYTTGAVADWPDTLDPSTGVFTYYGDNRKPGRDLHDTQRSGNLLLRDVFEHA HGSVEERRTVPPFLLFETAPPGRRIMFRGLLAPGAATLTSDDDLVAIWRNTRGHRFQNYRAHFTVLDVATVTRTWLTDIL AGHATDSEHCPPAWTAWVDGRAYSPLIAPSTTIIRTKAEQQPPDPTGVAILAAIREHYRGHEHDFEFCAVELWRLIAPAT GRCDVTPPSRDGGRDAIGDYILGPLSDPIAIDFALEAKCYTDTNSVGVRDVARLISRLRHRHFGVFITTSHFNQQVYTEV RTDRHPIALVSGRDIVNALRAHGYADVNAVNAWLGKIPNVHVSAKGAPNP
Sequences:
>Translated_450_residues MQSTGVRPCPLASVAVATEVATPGGASDARCLDEPSSGLGSLRAVDDKSQVVPFVDLPTAALVVDQLYEGGTAGTLADDP LARLLPVGNQGGFRYAGSPRKGTVRLSVLYTTGAVADWPDTLDPSTGVFTYYGDNRKPGRDLHDTQRSGNLLLRDVFEHA HGSVEERRTVPPFLLFETAPPGRRIMFRGLLAPGAATLTSDDDLVAIWRNTRGHRFQNYRAHFTVLDVATVTRTWLTDIL AGHATDSEHCPPAWTAWVDGRAYSPLIAPSTTIIRTKAEQQPPDPTGVAILAAIREHYRGHEHDFEFCAVELWRLIAPAT GRCDVTPPSRDGGRDAIGDYILGPLSDPIAIDFALEAKCYTDTNSVGVRDVARLISRLRHRHFGVFITTSHFNQQVYTEV RTDRHPIALVSGRDIVNALRAHGYADVNAVNAWLGKIPNVHVSAKGAPNP >Mature_450_residues MQSTGVRPCPLASVAVATEVATPGGASDARCLDEPSSGLGSLRAVDDKSQVVPFVDLPTAALVVDQLYEGGTAGTLADDP LARLLPVGNQGGFRYAGSPRKGTVRLSVLYTTGAVADWPDTLDPSTGVFTYYGDNRKPGRDLHDTQRSGNLLLRDVFEHA HGSVEERRTVPPFLLFETAPPGRRIMFRGLLAPGAATLTSDDDLVAIWRNTRGHRFQNYRAHFTVLDVATVTRTWLTDIL AGHATDSEHCPPAWTAWVDGRAYSPLIAPSTTIIRTKAEQQPPDPTGVAILAAIREHYRGHEHDFEFCAVELWRLIAPAT GRCDVTPPSRDGGRDAIGDYILGPLSDPIAIDFALEAKCYTDTNSVGVRDVARLISRLRHRHFGVFITTSHFNQQVYTEV RTDRHPIALVSGRDIVNALRAHGYADVNAVNAWLGKIPNVHVSAKGAPNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48827; Mature: 48827
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTGVRPCPLASVAVATEVATPGGASDARCLDEPSSGLGSLRAVDDKSQVVPFVDLPTA CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEEEECCCHHEEEEECCCHH ALVVDQLYEGGTAGTLADDPLARLLPVGNQGGFRYAGSPRKGTVRLSVLYTTGAVADWPD HHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCC TLDPSTGVFTYYGDNRKPGRDLHDTQRSGNLLLRDVFEHAHGSVEERRTVPPFLLFETAP CCCCCCCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCEEEEECCC PGRRIMFRGLLAPGAATLTSDDDLVAIWRNTRGHRFQNYRAHFTVLDVATVTRTWLTDIL CCCEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHH AGHATDSEHCPPAWTAWVDGRAYSPLIAPSTTIIRTKAEQQPPDPTGVAILAAIREHYRG HCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC HEHDFEFCAVELWRLIAPATGRCDVTPPSRDGGRDAIGDYILGPLSDPIAIDFALEAKCY CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEE TDTNSVGVRDVARLISRLRHRHFGVFITTSHFNQQVYTEVRTDRHPIALVSGRDIVNALR CCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHH AHGYADVNAVNAWLGKIPNVHVSAKGAPNP HCCCCCHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure MQSTGVRPCPLASVAVATEVATPGGASDARCLDEPSSGLGSLRAVDDKSQVVPFVDLPTA CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEEEECCCHHEEEEECCCHH ALVVDQLYEGGTAGTLADDPLARLLPVGNQGGFRYAGSPRKGTVRLSVLYTTGAVADWPD HHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCC TLDPSTGVFTYYGDNRKPGRDLHDTQRSGNLLLRDVFEHAHGSVEERRTVPPFLLFETAP CCCCCCCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCEEEEECCC PGRRIMFRGLLAPGAATLTSDDDLVAIWRNTRGHRFQNYRAHFTVLDVATVTRTWLTDIL CCCEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHH AGHATDSEHCPPAWTAWVDGRAYSPLIAPSTTIIRTKAEQQPPDPTGVAILAAIREHYRG HCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC HEHDFEFCAVELWRLIAPATGRCDVTPPSRDGGRDAIGDYILGPLSDPIAIDFALEAKCY CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEE TDTNSVGVRDVARLISRLRHRHFGVFITTSHFNQQVYTEVRTDRHPIALVSGRDIVNALR CCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHH AHGYADVNAVNAWLGKIPNVHVSAKGAPNP HCCCCCHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA