| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317053
Identifier: 158317053
GI number: 158317053
Start: 6371950
End: 6373755
Strand: Reverse
Name: 158317053
Synonym: Franean1_5297
Alternate gene names: NA
Gene position: 6373755-6371950 (Counterclockwise)
Preceding gene: 158317054
Following gene: 158317050
Centisome position: 70.96
GC content: 74.92
Gene sequence:
>1806_bases ATGCCGGACCCGACCGACGCGGCCGACCGGACCGGCGCGGCCGAGCTCGACCCGGACGCCACCAACGATCTCGGGAGGCC CCGCTCCGGCCGGCCGGGTGCCCCCGCTCCGGCGTTCACCCGCCGGCGGCTGATCACCGGCGTGGCCGGCCTCGGCGCGC TGTCCGCCGCCGGGGCGGCCGCGTGGCGCCTGCTCGACGACGGCTCCGGCCCGCTGCCGTCGGTGCCGTCGCCGCACGCG TCCACGCCGGTGGGCGGGGCCACCGCGGCTCCGTCCCTGCCCCCCGGCTCGCTCAAGGAGATCCCCGAGGACCTGCTGAC GATCTTCGGTGCGCCGGGCACGTTCGGTGATCTCGGCTCCGCGTCCAGGATCGACGTCGTCGACGTGCCTGGCTGGGGAT TCGGCCCCGGGCAGGCAGGGTTCATGTCGGCGGTCGCGGCGGACGGAACGGTCTTCATCAGCACGACGCCGTTCACCGAC GACCAGTCGAAGCTCACCGGGACCGGCATGGAGCTCGGCCTGTTCGAGCCGGAGGGGCGCCGTTTCACCCGCCTGGTCAT CCCGTCCTCCACCGGCCGGGAGGCGCAGCCGCGCGCCGACCCTGCCTTCGCCGGCATCGGCGGCGGCGACGTCTCGGACG TCATCGTGGTGCCCGCGCCGGCGGGGGAGGAGGGCGAGCGAGCCGTCTTCACCTCGCTGATGCCCTACTACAACTGGGAC GTGCGGACCTACGGCCAGCTGCCGGCCTTCGGGCAACTGCGCCGCGACGGCCCGGGCGGCGTGTGGCGCTACGACCCGGG GCTGTCGCGCACCGCCGACGCCCTGGCGGGCACCCTCGAGCCGCACATCGCCGCCACCGCCTTCCCCGTCATCAACCAGG GGGAGCCGCGTTCGCCGCGCGGCCCCGCGTCCATCGCCAGGCTCCCGCGCAGCGGGCACCTGGTCGTCGCCCAGTACCTC GGTACCGGCTACGGCGGGACGGAGAACGGCGCGCTCATGGTCCTCGACCTCGACGGCCGCGTCCGCGCGTACTGGCAGTA CCCGCAGGTCCGGCCGCTGGGCGTACAGGTGGTGGTCAACCCGCGGGAGGTCGTCGCCGACCCGACCAGCGAGGCCGACG ACGAGCGCTTCGTCCTGATCAGCGACTGCCGGGGCGCCGACTACGTCACGCATCCGTTCCCGATCCAGGAGTTCTCGTAC CAGGCGTCGACCGGCCGGATCATCCCGCGCAGCACCGCGGTGCGCGCCGTGCAGGACGGCTCGCGGATGGAGACCGCGGG CTTCGGCGCGGACGGCACCCTCTACGTGGCCCGGACGAAGGCCGACGGGCTGCGCGCCGACCGCCTCGCGGTCTACCCGA AGCTCGGGCGCGAGCGGGGCCTGGTCACCCGAACCCCGGCCACCGGCAACTGGCCGGTCGCGACCTGGGGCCAGGACAAC CGGCCGGACTTCCTCGTCGCCAACACCGACCGCGGCGGGCTGGTGCGCAGCCTGACCGTCGACCCGACGACCGGGACGGT GCTCCTCGCCGGCCTGGACGGTTTAGTGACGGCGGTGCGCCCGGCGGGCCGGGGCAGCCGGATGACCTTCCGGACTCTGG ACCCGGTGGACGTCGGCCTGGACCACCTGCGCGGGCCGGCGACCCGGTACGTCGGGATCCGGCGGGGGGCGGTGGACGCG CGGCGCCGCGTGCTGTGGCTGCCGGTGAACCAGATGGTGCTCGACGGCATCCGCTGGCCCTACCCGCCGTTCAAGCTGGA CCAGTGGCTGCTGCGGGTGAACCTGGACGTGCTGCTCCGCGAGTGA
Upstream 100 bases:
>100_bases AGGCCGTCGCCCAGCACGGGTACCTGCGCGCCGTCGCCGAGGGCACCGGGGACAGCTACGTCAACACGATCGTCTTCCGA CCCAGGGCCGCCCGCATCTG
Downstream 100 bases:
>100_bases GCGCCGGCCCGCGCGCCGGGCGGTTCCGGTGCGGTCGGACGGGCGGGCGGGCCGGCGCCCTGGTCGTCAGGCGGTGACGT CCCGGCGGCGGAACAGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MPDPTDAADRTGAAELDPDATNDLGRPRSGRPGAPAPAFTRRRLITGVAGLGALSAAGAAAWRLLDDGSGPLPSVPSPHA STPVGGATAAPSLPPGSLKEIPEDLLTIFGAPGTFGDLGSASRIDVVDVPGWGFGPGQAGFMSAVAADGTVFISTTPFTD DQSKLTGTGMELGLFEPEGRRFTRLVIPSSTGREAQPRADPAFAGIGGGDVSDVIVVPAPAGEEGERAVFTSLMPYYNWD VRTYGQLPAFGQLRRDGPGGVWRYDPGLSRTADALAGTLEPHIAATAFPVINQGEPRSPRGPASIARLPRSGHLVVAQYL GTGYGGTENGALMVLDLDGRVRAYWQYPQVRPLGVQVVVNPREVVADPTSEADDERFVLISDCRGADYVTHPFPIQEFSY QASTGRIIPRSTAVRAVQDGSRMETAGFGADGTLYVARTKADGLRADRLAVYPKLGRERGLVTRTPATGNWPVATWGQDN RPDFLVANTDRGGLVRSLTVDPTTGTVLLAGLDGLVTAVRPAGRGSRMTFRTLDPVDVGLDHLRGPATRYVGIRRGAVDA RRRVLWLPVNQMVLDGIRWPYPPFKLDQWLLRVNLDVLLRE
Sequences:
>Translated_601_residues MPDPTDAADRTGAAELDPDATNDLGRPRSGRPGAPAPAFTRRRLITGVAGLGALSAAGAAAWRLLDDGSGPLPSVPSPHA STPVGGATAAPSLPPGSLKEIPEDLLTIFGAPGTFGDLGSASRIDVVDVPGWGFGPGQAGFMSAVAADGTVFISTTPFTD DQSKLTGTGMELGLFEPEGRRFTRLVIPSSTGREAQPRADPAFAGIGGGDVSDVIVVPAPAGEEGERAVFTSLMPYYNWD VRTYGQLPAFGQLRRDGPGGVWRYDPGLSRTADALAGTLEPHIAATAFPVINQGEPRSPRGPASIARLPRSGHLVVAQYL GTGYGGTENGALMVLDLDGRVRAYWQYPQVRPLGVQVVVNPREVVADPTSEADDERFVLISDCRGADYVTHPFPIQEFSY QASTGRIIPRSTAVRAVQDGSRMETAGFGADGTLYVARTKADGLRADRLAVYPKLGRERGLVTRTPATGNWPVATWGQDN RPDFLVANTDRGGLVRSLTVDPTTGTVLLAGLDGLVTAVRPAGRGSRMTFRTLDPVDVGLDHLRGPATRYVGIRRGAVDA RRRVLWLPVNQMVLDGIRWPYPPFKLDQWLLRVNLDVLLRE >Mature_600_residues PDPTDAADRTGAAELDPDATNDLGRPRSGRPGAPAPAFTRRRLITGVAGLGALSAAGAAAWRLLDDGSGPLPSVPSPHAS TPVGGATAAPSLPPGSLKEIPEDLLTIFGAPGTFGDLGSASRIDVVDVPGWGFGPGQAGFMSAVAADGTVFISTTPFTDD QSKLTGTGMELGLFEPEGRRFTRLVIPSSTGREAQPRADPAFAGIGGGDVSDVIVVPAPAGEEGERAVFTSLMPYYNWDV RTYGQLPAFGQLRRDGPGGVWRYDPGLSRTADALAGTLEPHIAATAFPVINQGEPRSPRGPASIARLPRSGHLVVAQYLG TGYGGTENGALMVLDLDGRVRAYWQYPQVRPLGVQVVVNPREVVADPTSEADDERFVLISDCRGADYVTHPFPIQEFSYQ ASTGRIIPRSTAVRAVQDGSRMETAGFGADGTLYVARTKADGLRADRLAVYPKLGRERGLVTRTPATGNWPVATWGQDNR PDFLVANTDRGGLVRSLTVDPTTGTVLLAGLDGLVTAVRPAGRGSRMTFRTLDPVDVGLDHLRGPATRYVGIRRGAVDAR RRVLWLPVNQMVLDGIRWPYPPFKLDQWLLRVNLDVLLRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63804; Mature: 63672
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPTDAADRTGAAELDPDATNDLGRPRSGRPGAPAPAFTRRRLITGVAGLGALSAAGAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH AWRLLDDGSGPLPSVPSPHASTPVGGATAAPSLPPGSLKEIPEDLLTIFGAPGTFGDLGS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC ASRIDVVDVPGWGFGPGQAGFMSAVAADGTVFISTTPFTDDQSKLTGTGMELGLFEPEGR CCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEECCCEEEEEECCCCC RFTRLVIPSSTGREAQPRADPAFAGIGGGDVSDVIVVPAPAGEEGERAVFTSLMPYYNWD EEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCC VRTYGQLPAFGQLRRDGPGGVWRYDPGLSRTADALAGTLEPHIAATAFPVINQGEPRSPR EEECCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCHHEEECCEECCCCCCCCC GPASIARLPRSGHLVVAQYLGTGYGGTENGALMVLDLDGRVRAYWQYPQVRPLGVQVVVN CCHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEC PREVVADPTSEADDERFVLISDCRGADYVTHPFPIQEFSYQASTGRIIPRSTAVRAVQDG CHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEECHHHHHHHHCC SRMETAGFGADGTLYVARTKADGLRADRLAVYPKLGRERGLVTRTPATGNWPVATWGQDN CCEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCEEECCCCC RPDFLVANTDRGGLVRSLTVDPTTGTVLLAGLDGLVTAVRPAGRGSRMTFRTLDPVDVGL CCCEEEEECCCCCEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCEEEEEECCCHHHCH DHLRGPATRYVGIRRGAVDARRRVLWLPVNQMVLDGIRWPYPPFKLDQWLLRVNLDVLLR HHHCCCHHHEEEEECCCHHHCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHEEECEEEEEE E C >Mature Secondary Structure PDPTDAADRTGAAELDPDATNDLGRPRSGRPGAPAPAFTRRRLITGVAGLGALSAAGAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH AWRLLDDGSGPLPSVPSPHASTPVGGATAAPSLPPGSLKEIPEDLLTIFGAPGTFGDLGS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC ASRIDVVDVPGWGFGPGQAGFMSAVAADGTVFISTTPFTDDQSKLTGTGMELGLFEPEGR CCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEECCCEEEEEECCCCC RFTRLVIPSSTGREAQPRADPAFAGIGGGDVSDVIVVPAPAGEEGERAVFTSLMPYYNWD EEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCC VRTYGQLPAFGQLRRDGPGGVWRYDPGLSRTADALAGTLEPHIAATAFPVINQGEPRSPR EEECCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCHHEEECCEECCCCCCCCC GPASIARLPRSGHLVVAQYLGTGYGGTENGALMVLDLDGRVRAYWQYPQVRPLGVQVVVN CCHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEC PREVVADPTSEADDERFVLISDCRGADYVTHPFPIQEFSYQASTGRIIPRSTAVRAVQDG CHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEECHHHHHHHHCC SRMETAGFGADGTLYVARTKADGLRADRLAVYPKLGRERGLVTRTPATGNWPVATWGQDN CCEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCEEECCCCC RPDFLVANTDRGGLVRSLTVDPTTGTVLLAGLDGLVTAVRPAGRGSRMTFRTLDPVDVGL CCCEEEEECCCCCEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCEEEEEECCCHHHCH DHLRGPATRYVGIRRGAVDARRRVLWLPVNQMVLDGIRWPYPPFKLDQWLLRVNLDVLLR HHHCCCHHHEEEEECCCHHHCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHEEECEEEEEE E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA