Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316963

Identifier: 158316963

GI number: 158316963

Start: 6252167

End: 6253021

Strand: Direct

Name: 158316963

Synonym: Franean1_5207

Alternate gene names: NA

Gene position: 6252167-6253021 (Clockwise)

Preceding gene: 158316962

Following gene: 158316964

Centisome position: 69.61

GC content: 74.74

Gene sequence:

>855_bases
GTGAGACCACACGTTCATGTCCGTCCCCGGGGCGGCCGGCGCCCAGGCGGCCTTCGCCCCGGGTGGGTGGGCCGCTACCG
TCGGGACATGGCGCCCGACTCACCCGATCCCGGCCCGGCTCCCGCGACCGGCGACGCCGACGCGCCGGTCGACCCGAGCC
GGGCCGGCAGTCCGGCCGAGGCCGGCCCCGCGAAAACCCCCGGCCAGGCTGCCACCACCACCGCCCCCGCCGGCAAGGCA
GACACCCCCGGCCCCGCTTTCGGCGTCGGCAAGGCGACGAGCGCCGGCCCGCGCCGCAGCCCGTCCGCGCCGATCACCGA
TGCCGACCGGCAGGCGACCGCCGACCAACTGCGTGCGGCCTGCGGCGACGGGCGGCTGACCCTGGACGAGTTCAGCGAGC
GGGTCGGGGGCGCCTGGGCCGCCCAGACCGCGGAGGAGCTGGCGCAGGCCGGGGCCGGCATCGTCCCGCCGCGGGTCGGC
ATCCAGCGCTCGTCGTCGACGATCGTCAACATTCTCGGCGACGGACGGCGGCTCGGCCGTTGGCGGATGCCCCGGCGGAC
GGTGATAGTCAACCTGCTCGGCGACTGGACGCTGGATCTGCGCGGTGCGCTGATGGACGAGGATGCCGTGACCGACGGCG
TGCTCGACATTCTCTATATCTCGCTGATCGGCGATCTCACCATCAGCGTCCCGGACGGGATGGAGGTCGACATGAGCGGC
CTGGTCGTGCTCGGCGACCGGCACCTGGAGCTGGCCATGGTCTCGGAACGCCCGGGAACCCCCCGGCTGCGGTTGCGGCT
GGCCGGCCTGATCGGCGACGTCTGGGTGAGCAGCGGGTCGCTGACCGGGCGGTGA

Upstream 100 bases:

>100_bases
TGCTGTGTCACGACGGCGGCGGCGATCGATCGCAGACCGTCGAGGCGCTTCGCCAGGTCCTGCCGGCGCTGCGGGCCAGG
GGCCTTACCTTCATGCCCCT

Downstream 100 bases:

>100_bases
CCCGCGATCCCGACAGACGCGATCACGACATAGCAGGCACGACGGCGCCACGCCGCTCGTACGGCACTATTTCCGCCGGG
GCGAGGGTGGGCGTTGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRPHVHVRPRGGRRPGGLRPGWVGRYRRDMAPDSPDPGPAPATGDADAPVDPSRAGSPAEAGPAKTPGQAATTTAPAGKA
DTPGPAFGVGKATSAGPRRSPSAPITDADRQATADQLRAACGDGRLTLDEFSERVGGAWAAQTAEELAQAGAGIVPPRVG
IQRSSSTIVNILGDGRRLGRWRMPRRTVIVNLLGDWTLDLRGALMDEDAVTDGVLDILYISLIGDLTISVPDGMEVDMSG
LVVLGDRHLELAMVSERPGTPRLRLRLAGLIGDVWVSSGSLTGR

Sequences:

>Translated_284_residues
MRPHVHVRPRGGRRPGGLRPGWVGRYRRDMAPDSPDPGPAPATGDADAPVDPSRAGSPAEAGPAKTPGQAATTTAPAGKA
DTPGPAFGVGKATSAGPRRSPSAPITDADRQATADQLRAACGDGRLTLDEFSERVGGAWAAQTAEELAQAGAGIVPPRVG
IQRSSSTIVNILGDGRRLGRWRMPRRTVIVNLLGDWTLDLRGALMDEDAVTDGVLDILYISLIGDLTISVPDGMEVDMSG
LVVLGDRHLELAMVSERPGTPRLRLRLAGLIGDVWVSSGSLTGR
>Mature_284_residues
MRPHVHVRPRGGRRPGGLRPGWVGRYRRDMAPDSPDPGPAPATGDADAPVDPSRAGSPAEAGPAKTPGQAATTTAPAGKA
DTPGPAFGVGKATSAGPRRSPSAPITDADRQATADQLRAACGDGRLTLDEFSERVGGAWAAQTAEELAQAGAGIVPPRVG
IQRSSSTIVNILGDGRRLGRWRMPRRTVIVNLLGDWTLDLRGALMDEDAVTDGVLDILYISLIGDLTISVPDGMEVDMSG
LVVLGDRHLELAMVSERPGTPRLRLRLAGLIGDVWVSSGSLTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012551 [H]

Pfam domain/function: PF08044 DUF1707 [H]

EC number: NA

Molecular weight: Translated: 29617; Mature: 29617

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPHVHVRPRGGRRPGGLRPGWVGRYRRDMAPDSPDPGPAPATGDADAPVDPSRAGSPAE
CCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGPAKTPGQAATTTAPAGKADTPGPAFGVGKATSAGPRRSPSAPITDADRQATADQLRAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CGDGRLTLDEFSERVGGAWAAQTAEELAQAGAGIVPPRVGIQRSSSTIVNILGDGRRLGR
HCCCCEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
WRMPRRTVIVNLLGDWTLDLRGALMDEDAVTDGVLDILYISLIGDLTISVPDGMEVDMSG
CCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCEECCCC
LVVLGDRHLELAMVSERPGTPRLRLRLAGLIGDVWVSSGSLTGR
EEEECCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRPHVHVRPRGGRRPGGLRPGWVGRYRRDMAPDSPDPGPAPATGDADAPVDPSRAGSPAE
CCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGPAKTPGQAATTTAPAGKADTPGPAFGVGKATSAGPRRSPSAPITDADRQATADQLRAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CGDGRLTLDEFSERVGGAWAAQTAEELAQAGAGIVPPRVGIQRSSSTIVNILGDGRRLGR
HCCCCEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
WRMPRRTVIVNLLGDWTLDLRGALMDEDAVTDGVLDILYISLIGDLTISVPDGMEVDMSG
CCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCEECCCC
LVVLGDRHLELAMVSERPGTPRLRLRLAGLIGDVWVSSGSLTGR
EEEECCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]