| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316939
Identifier: 158316939
GI number: 158316939
Start: 6221605
End: 6222687
Strand: Reverse
Name: 158316939
Synonym: Franean1_5183
Alternate gene names: NA
Gene position: 6222687-6221605 (Counterclockwise)
Preceding gene: 158316940
Following gene: 158316931
Centisome position: 69.28
GC content: 76.45
Gene sequence:
>1083_bases GTGCGTGGGCCCGCCGCCGCACCGGCAGCGGGCCCCGACGAGGCCCGCCCGGCGGAGGAACCGGCTGCCCTCGCCGCCCG TCGGGGCGTGCGGTGGTGGGTGGTCCGCGCAGCCCTGGTGCTCGCCGCCGCGCTTCTGGTCGTGGCGCTGGTCGGCCAGT GGAACGACGTCCGGGACTCGCTGGGCGACCTGACCGTTCTCGGTGTCGTCGGCTCCGGCGTGGCGACGACGCTCGCGGTC GGCGCCACCGTCCTGTCCTGGCGTGCCGTGCTCGCCGGGCTCGGTGCGCTGCTGCCGCTGCGCGCCGCCGTCCGGATCTT CTGCGTCGGCCAGATCGGTAAGTACATTCCGGGCAGTGTGTGGCCCGTCCTCGCCCAGATGGAGCTCTCCCGCGACTACG GGGTCTCCCGGCCGAAGTCGGCCCTGGCGAGTCTTGTGGTGCTCGCGCTGGCGGTGCCCTGCGGCGGTCTGGCCGCGGCC GTCACCCTGCCCTTCTCCTCCCGCGACGCGCTCGCCGACTACTGGTGGGCGCTGGCGGTGGTGCCCGTCTTCGCGGTGGT GCTCTACCCTCCGGTGCTCTCCAGGCTGCTGGCGGTCGCGTTCCGGCTGCTGCGCCGCCCGCCGCTGACCGAGCCGCTGA CCGCCCGCCCCATCGCCGTCGGCGCCGGCTGGCTGCTGGGCAGCTTCGCCTGCTACGGCGTGGGGACCTGGCTGCTGGTC CGTGACCTGCAGCCGGAGGTCGGCGGCGCCCGGCTGGTGGCGCTGTGCGTCGGCGCCTACGCCCTGGCCTGGACCGCGGG CTTCCTGGTGCTCGTCCTGCCCGCGGGCGCGGGCGTGCGTGAGGCCGTACTGGTGCTTGCCCTGGCCCCGGCGCTGCCGA GTGGCCCGTCGACGCTGATCGCTCTTGTCGCGCGCCTGCTCGCCACGGTCGCCGACATCGTCTGGGCGCTGGTCGGGGTG GCGCTGCGCCCGCGTGGCGAGGCGGTCGCCAGTAGGCCGGAGGACCTCGCCGGGTCGGGCCAGACCGGCCCACGGGCCGG GGGCGCCGCGGCCGTCGCCCAGCCGGCGCCGAGTAACCGCTGA
Upstream 100 bases:
>100_bases GCCCGGCGCGGGTGCCGTCCGGTGGACGCCTTAGGCTGACCCGGTGAGTCGGCGTCCCGCGCACCGTGAATCCCCGTCCG CCATGGCTGGCGGGGACGTC
Downstream 100 bases:
>100_bases CCCGCGCACCGGCGTGGGAATGTCGCCGTTCCGCACCGTCAATGATCGGGAGCGTGACCGGTGAGGTGCCCAGAGCGATG TCCTCCGTATTCGGATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDSLGDLTVLGVVGSGVATTLAV GATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSVWPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAA VTLPFSSRDALADYWWALAVVPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLIALVARLLATVADIVWALVGV ALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR
Sequences:
>Translated_360_residues MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDSLGDLTVLGVVGSGVATTLAV GATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSVWPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAA VTLPFSSRDALADYWWALAVVPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLIALVARLLATVADIVWALVGV ALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR >Mature_360_residues MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDSLGDLTVLGVVGSGVATTLAV GATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSVWPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAA VTLPFSSRDALADYWWALAVVPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLIALVARLLATVADIVWALVGV ALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36774; Mature: 36774
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDS CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LGDLTVLGVVGSGVATTLAVGATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSV HCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH WPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAAVTLPFSSRDALADYWWALAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHHHHH VPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCHHHHH ALVARLLATVADIVWALVGVALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDS CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LGDLTVLGVVGSGVATTLAVGATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSV HCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH WPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAAVTLPFSSRDALADYWWALAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHHHHH VPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCHHHHH ALVARLLATVADIVWALVGVALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA