Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316939

Identifier: 158316939

GI number: 158316939

Start: 6221605

End: 6222687

Strand: Reverse

Name: 158316939

Synonym: Franean1_5183

Alternate gene names: NA

Gene position: 6222687-6221605 (Counterclockwise)

Preceding gene: 158316940

Following gene: 158316931

Centisome position: 69.28

GC content: 76.45

Gene sequence:

>1083_bases
GTGCGTGGGCCCGCCGCCGCACCGGCAGCGGGCCCCGACGAGGCCCGCCCGGCGGAGGAACCGGCTGCCCTCGCCGCCCG
TCGGGGCGTGCGGTGGTGGGTGGTCCGCGCAGCCCTGGTGCTCGCCGCCGCGCTTCTGGTCGTGGCGCTGGTCGGCCAGT
GGAACGACGTCCGGGACTCGCTGGGCGACCTGACCGTTCTCGGTGTCGTCGGCTCCGGCGTGGCGACGACGCTCGCGGTC
GGCGCCACCGTCCTGTCCTGGCGTGCCGTGCTCGCCGGGCTCGGTGCGCTGCTGCCGCTGCGCGCCGCCGTCCGGATCTT
CTGCGTCGGCCAGATCGGTAAGTACATTCCGGGCAGTGTGTGGCCCGTCCTCGCCCAGATGGAGCTCTCCCGCGACTACG
GGGTCTCCCGGCCGAAGTCGGCCCTGGCGAGTCTTGTGGTGCTCGCGCTGGCGGTGCCCTGCGGCGGTCTGGCCGCGGCC
GTCACCCTGCCCTTCTCCTCCCGCGACGCGCTCGCCGACTACTGGTGGGCGCTGGCGGTGGTGCCCGTCTTCGCGGTGGT
GCTCTACCCTCCGGTGCTCTCCAGGCTGCTGGCGGTCGCGTTCCGGCTGCTGCGCCGCCCGCCGCTGACCGAGCCGCTGA
CCGCCCGCCCCATCGCCGTCGGCGCCGGCTGGCTGCTGGGCAGCTTCGCCTGCTACGGCGTGGGGACCTGGCTGCTGGTC
CGTGACCTGCAGCCGGAGGTCGGCGGCGCCCGGCTGGTGGCGCTGTGCGTCGGCGCCTACGCCCTGGCCTGGACCGCGGG
CTTCCTGGTGCTCGTCCTGCCCGCGGGCGCGGGCGTGCGTGAGGCCGTACTGGTGCTTGCCCTGGCCCCGGCGCTGCCGA
GTGGCCCGTCGACGCTGATCGCTCTTGTCGCGCGCCTGCTCGCCACGGTCGCCGACATCGTCTGGGCGCTGGTCGGGGTG
GCGCTGCGCCCGCGTGGCGAGGCGGTCGCCAGTAGGCCGGAGGACCTCGCCGGGTCGGGCCAGACCGGCCCACGGGCCGG
GGGCGCCGCGGCCGTCGCCCAGCCGGCGCCGAGTAACCGCTGA

Upstream 100 bases:

>100_bases
GCCCGGCGCGGGTGCCGTCCGGTGGACGCCTTAGGCTGACCCGGTGAGTCGGCGTCCCGCGCACCGTGAATCCCCGTCCG
CCATGGCTGGCGGGGACGTC

Downstream 100 bases:

>100_bases
CCCGCGCACCGGCGTGGGAATGTCGCCGTTCCGCACCGTCAATGATCGGGAGCGTGACCGGTGAGGTGCCCAGAGCGATG
TCCTCCGTATTCGGATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDSLGDLTVLGVVGSGVATTLAV
GATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSVWPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAA
VTLPFSSRDALADYWWALAVVPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV
RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLIALVARLLATVADIVWALVGV
ALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR

Sequences:

>Translated_360_residues
MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDSLGDLTVLGVVGSGVATTLAV
GATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSVWPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAA
VTLPFSSRDALADYWWALAVVPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV
RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLIALVARLLATVADIVWALVGV
ALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR
>Mature_360_residues
MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDSLGDLTVLGVVGSGVATTLAV
GATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSVWPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAA
VTLPFSSRDALADYWWALAVVPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV
RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLIALVARLLATVADIVWALVGV
ALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36774; Mature: 36774

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDS
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGDLTVLGVVGSGVATTLAVGATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSV
HCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAAVTLPFSSRDALADYWWALAV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHHHHH
VPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
ALVARLLATVADIVWALVGVALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGPAAAPAAGPDEARPAEEPAALAARRGVRWWVVRAALVLAAALLVVALVGQWNDVRDS
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGDLTVLGVVGSGVATTLAVGATVLSWRAVLAGLGALLPLRAAVRIFCVGQIGKYIPGSV
HCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
WPVLAQMELSRDYGVSRPKSALASLVVLALAVPCGGLAAAVTLPFSSRDALADYWWALAV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCHHHHHHHHHHHH
VPVFAVVLYPPVLSRLLAVAFRLLRRPPLTEPLTARPIAVGAGWLLGSFACYGVGTWLLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RDLQPEVGGARLVALCVGAYALAWTAGFLVLVLPAGAGVREAVLVLALAPALPSGPSTLI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
ALVARLLATVADIVWALVGVALRPRGEAVASRPEDLAGSGQTGPRAGGAAAVAQPAPSNR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA