Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316891

Identifier: 158316891

GI number: 158316891

Start: 6151638

End: 6153506

Strand: Reverse

Name: 158316891

Synonym: Franean1_5135

Alternate gene names: NA

Gene position: 6153506-6151638 (Counterclockwise)

Preceding gene: 158316893

Following gene: 158316889

Centisome position: 68.51

GC content: 74.85

Gene sequence:

>1869_bases
GTGGCGCCGCGGTGCGCGGCGTCGTCGTCCGGCTGGCGCACCACCATAGAGTCTGATGTCGTGAGAGTCGGACCCCTGCC
TCAGAGCTCCAGCGGGCAAGGCCCCAGCGGACGAGGCCCCCGCGCGCGCGGCGAGGCCCGGCCCCTGCGGGCATGGCAAC
GCGCAGCCCTGGAGACCTACCGGTCGCGCAGCGCGTCCGGCGGCCGCGACTTCCTGGCCGTCGCGACCCCGGGCGCCGGC
AAGACGACGTTCGCGCTGGAGATCGCCGCCGACCTGTTGGCCGCGGGCGAGGTGCGTTCGGTGACCGTGGTCGCCCCGAC
CGAGCACCTCAAGCGGCAGTGGGCCAACGCCGCCTCCGCGGTCGGGGTCGACCTGGACCCGACCTTCCGCAACTCGGCCG
GCGCCACCGCGTCGGACTACACCGGGGTCGCGGTCACCTACGCCCAGGTCGCCGCGCACCCCGCCCTGCACCGCATGCGC
ACGGCCGCGCGCCGCACGCTGGTGATCCTCGACGAGATCCACCACGCGGGCGACGCCCTGTCCTGGGGCGAGGCGGTCCG
GGAGGCGTTCGAGCCGGCCGCCCGCCGGCTCGCACTCACCGGAACCCCGTTCCGGTCCGACGTCAACCCGATCCCGTTCG
TGACCTACCTGCCCGACGCCGAGGGCGTGACGCGCAGCGTCGCGGACTCCTCCTACGGTTACGCCGAGGCGCTGCGTGAC
GGTGTGGTCCGTCCCGTGCTCTTCCTCGCCTACTCGGGTGAGATGTCCTGGCGCACCAGCGCCGGCGCGGAGCTCAGCGC
CCGGCTCGGTGAGCCGCTGAACAGCGAGCAGACCGCGGCAGCGTGGCGCACGGCCCTCGACCCCCGCGGAGACTGGATGC
CCGCGGTCCTGGCCGCCGCCGACACCCGGCTCTCCCAGGTGCGCCGGGGCGGGATGCCGGATGCCGGAGGCCTGGTCATC
GCGACCGACCACACCAACGCCCGCGCCTACGCCGGCCTGCTGCGGCGGATCACCGGCGCGTCTCCCGTGATCGTCCTCTC
CGACGACCCGACCGCCAGCACGAAGATCGCCACGTTCCGTGAGTCGACGGACCGGTGGATGGTCGCCGTCCGCATGGTCA
GTGAGGGCGTGGACGTCCCCCGCCTGGCGGTCGGCGTGTACGCCACCTCGGCCTCGACGCCGCTGTACTTCGCCCAGGCC
GTCGGCCGGTTCGTCCGTGGCCGCGGACGCTCGGAGACGGCGTCGGTGTTCCTGCCCAGCGTCCCGTCGCTGCTGGCGCT
GGCCGGCGAGATGGAGGTCCAGCGCGACCACGCGCTCGACAAGCCGCAGCGCGAGCCCGACGCGTTCGACGACGACGCGC
TGCGCGAGGCCAACCGCCGCCGTGACACCCCCGACAAGCCCGACACCCTGTTCACCGCGCTCGGCTCCTCCGCCCAACTC
GACCGGGTGATCTTCGACGGCGGCGAGTTCGGCACGCCGGCCGCCTCCGGCTCCCTCGAGGAGGAGGACTTCCTGGGTCT
GCCGGGCCTGCTCGAGCCCGACCAGGTCGCGACCCTGCTGCGCCAGCGCCAGGCGGCGCAGCAGGCCGCCGCGGCGAAGG
CGCAGTCCGCGGCCGGCGAACCCGTGGTGCCGGCCGCCCGGCAGGGGGAGGCGGGCACCGACCCGGGCGACCGGCCCGTC
CACGAGCAGATCGGTGACCTGCGGCGCGAGCTGAACAAGCTTGTCGCCGCGCACTACCATCGCACCGGAAAGCCGCACGG
GATGATCCACGCCGAGCTGCGCCGCTCCTGCGGCGGCCCGCCGAGCGCCCAGGCCAGCACGGCCCAGCTCCAGGCCCGGA
TCGACACGATGCGCCGCTGGGCCGGCTGA

Upstream 100 bases:

>100_bases
CCTGAGTTAGCAAAGACGGTGATACCCCCTGTGTGGTCCTTCGGTGACAAGAAAGCGACAAATCATGGCACCGGTTGAGC
TGCCCACAGGGAGTGGCCGG

Downstream 100 bases:

>100_bases
GCCGCCCCGCCGACCCCGGTCAGACCCAGCCCGGCGGACCCCCGTCGGCCTCGTCCAGCGCGCCGGTCCTCGTCCGTCCA
GGTTGTCCGCCGCCCCGTCC

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MAPRCAASSSGWRTTIESDVVRVGPLPQSSSGQGPSGRGPRARGEARPLRAWQRAALETYRSRSASGGRDFLAVATPGAG
KTTFALEIAADLLAAGEVRSVTVVAPTEHLKRQWANAASAVGVDLDPTFRNSAGATASDYTGVAVTYAQVAAHPALHRMR
TAARRTLVILDEIHHAGDALSWGEAVREAFEPAARRLALTGTPFRSDVNPIPFVTYLPDAEGVTRSVADSSYGYAEALRD
GVVRPVLFLAYSGEMSWRTSAGAELSARLGEPLNSEQTAAAWRTALDPRGDWMPAVLAAADTRLSQVRRGGMPDAGGLVI
ATDHTNARAYAGLLRRITGASPVIVLSDDPTASTKIATFRESTDRWMVAVRMVSEGVDVPRLAVGVYATSASTPLYFAQA
VGRFVRGRGRSETASVFLPSVPSLLALAGEMEVQRDHALDKPQREPDAFDDDALREANRRRDTPDKPDTLFTALGSSAQL
DRVIFDGGEFGTPAASGSLEEEDFLGLPGLLEPDQVATLLRQRQAAQQAAAAKAQSAAGEPVVPAARQGEAGTDPGDRPV
HEQIGDLRRELNKLVAAHYHRTGKPHGMIHAELRRSCGGPPSAQASTAQLQARIDTMRRWAG

Sequences:

>Translated_622_residues
MAPRCAASSSGWRTTIESDVVRVGPLPQSSSGQGPSGRGPRARGEARPLRAWQRAALETYRSRSASGGRDFLAVATPGAG
KTTFALEIAADLLAAGEVRSVTVVAPTEHLKRQWANAASAVGVDLDPTFRNSAGATASDYTGVAVTYAQVAAHPALHRMR
TAARRTLVILDEIHHAGDALSWGEAVREAFEPAARRLALTGTPFRSDVNPIPFVTYLPDAEGVTRSVADSSYGYAEALRD
GVVRPVLFLAYSGEMSWRTSAGAELSARLGEPLNSEQTAAAWRTALDPRGDWMPAVLAAADTRLSQVRRGGMPDAGGLVI
ATDHTNARAYAGLLRRITGASPVIVLSDDPTASTKIATFRESTDRWMVAVRMVSEGVDVPRLAVGVYATSASTPLYFAQA
VGRFVRGRGRSETASVFLPSVPSLLALAGEMEVQRDHALDKPQREPDAFDDDALREANRRRDTPDKPDTLFTALGSSAQL
DRVIFDGGEFGTPAASGSLEEEDFLGLPGLLEPDQVATLLRQRQAAQQAAAAKAQSAAGEPVVPAARQGEAGTDPGDRPV
HEQIGDLRRELNKLVAAHYHRTGKPHGMIHAELRRSCGGPPSAQASTAQLQARIDTMRRWAG
>Mature_621_residues
APRCAASSSGWRTTIESDVVRVGPLPQSSSGQGPSGRGPRARGEARPLRAWQRAALETYRSRSASGGRDFLAVATPGAGK
TTFALEIAADLLAAGEVRSVTVVAPTEHLKRQWANAASAVGVDLDPTFRNSAGATASDYTGVAVTYAQVAAHPALHRMRT
AARRTLVILDEIHHAGDALSWGEAVREAFEPAARRLALTGTPFRSDVNPIPFVTYLPDAEGVTRSVADSSYGYAEALRDG
VVRPVLFLAYSGEMSWRTSAGAELSARLGEPLNSEQTAAAWRTALDPRGDWMPAVLAAADTRLSQVRRGGMPDAGGLVIA
TDHTNARAYAGLLRRITGASPVIVLSDDPTASTKIATFRESTDRWMVAVRMVSEGVDVPRLAVGVYATSASTPLYFAQAV
GRFVRGRGRSETASVFLPSVPSLLALAGEMEVQRDHALDKPQREPDAFDDDALREANRRRDTPDKPDTLFTALGSSAQLD
RVIFDGGEFGTPAASGSLEEEDFLGLPGLLEPDQVATLLRQRQAAQQAAAAKAQSAAGEPVVPAARQGEAGTDPGDRPVH
EQIGDLRRELNKLVAAHYHRTGKPHGMIHAELRRSCGGPPSAQASTAQLQARIDTMRRWAG

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1624 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 66150; Mature: 66018

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRCAASSSGWRTTIESDVVRVGPLPQSSSGQGPSGRGPRARGEARPLRAWQRAALETY
CCCCCCCCCCCCCEEHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RSRSASGGRDFLAVATPGAGKTTFALEIAADLLAAGEVRSVTVVAPTEHLKRQWANAASA
HHCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
VGVDLDPTFRNSAGATASDYTGVAVTYAQVAAHPALHRMRTAARRTLVILDEIHHAGDAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SWGEAVREAFEPAARRLALTGTPFRSDVNPIPFVTYLPDAEGVTRSVADSSYGYAEALRD
HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCHHHHHHC
GVVRPVLFLAYSGEMSWRTSAGAELSARLGEPLNSEQTAAAWRTALDPRGDWMPAVLAAA
CHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
DTRLSQVRRGGMPDAGGLVIATDHTNARAYAGLLRRITGASPVIVLSDDPTASTKIATFR
HHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHH
ESTDRWMVAVRMVSEGVDVPRLAVGVYATSASTPLYFAQAVGRFVRGRGRSETASVFLPS
HCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCC
VPSLLALAGEMEVQRDHALDKPQREPDAFDDDALREANRRRDTPDKPDTLFTALGSSAQL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
DRVIFDGGEFGTPAASGSLEEEDFLGLPGLLEPDQVATLLRQRQAAQQAAAAKAQSAAGE
CCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVVPAARQGEAGTDPGDRPVHEQIGDLRRELNKLVAAHYHRTGKPHGMIHAELRRSCGGP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCC
PSAQASTAQLQARIDTMRRWAG
CCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
APRCAASSSGWRTTIESDVVRVGPLPQSSSGQGPSGRGPRARGEARPLRAWQRAALETY
CCCCCCCCCCCCEEHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RSRSASGGRDFLAVATPGAGKTTFALEIAADLLAAGEVRSVTVVAPTEHLKRQWANAASA
HHCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
VGVDLDPTFRNSAGATASDYTGVAVTYAQVAAHPALHRMRTAARRTLVILDEIHHAGDAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SWGEAVREAFEPAARRLALTGTPFRSDVNPIPFVTYLPDAEGVTRSVADSSYGYAEALRD
HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCHHHHHHC
GVVRPVLFLAYSGEMSWRTSAGAELSARLGEPLNSEQTAAAWRTALDPRGDWMPAVLAAA
CHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
DTRLSQVRRGGMPDAGGLVIATDHTNARAYAGLLRRITGASPVIVLSDDPTASTKIATFR
HHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHH
ESTDRWMVAVRMVSEGVDVPRLAVGVYATSASTPLYFAQAVGRFVRGRGRSETASVFLPS
HCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCC
VPSLLALAGEMEVQRDHALDKPQREPDAFDDDALREANRRRDTPDKPDTLFTALGSSAQL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
DRVIFDGGEFGTPAASGSLEEEDFLGLPGLLEPDQVATLLRQRQAAQQAAAAKAQSAAGE
CCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVVPAARQGEAGTDPGDRPVHEQIGDLRRELNKLVAAHYHRTGKPHGMIHAELRRSCGGP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCC
PSAQASTAQLQARIDTMRRWAG
CCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]