| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316883
Identifier: 158316883
GI number: 158316883
Start: 6141880
End: 6142590
Strand: Reverse
Name: 158316883
Synonym: Franean1_5127
Alternate gene names: NA
Gene position: 6142590-6141880 (Counterclockwise)
Preceding gene: 158316889
Following gene: 158316882
Centisome position: 68.39
GC content: 74.4
Gene sequence:
>711_bases GTGCGGAGGTCGTGCGGAGGTGTCGTGTCTGATCTCGTCGTCGTCGCGCTCGGCGTCGCGCTGCTGGTGGTGACCGGCAG CGCTCTCATCCTGCTCCGGATGCCGCCGGAACGGCTCGAGCGCACGGTCGACGAGGTGACGTCCGTGGAGGTCCGGCTCG CCGCCGGCCGGGTCGAGATCGGCGAGTACGACCGGTCGGACGTCGCCGTCGAGATCCTCGCGCGCCGTCGACCCGGGCGG GCGAGGCCGACCATGACCCGCTCGGGCGGTGTGCTGCGGATCGACGGACGGACGAGCGAGGTGCTGGCCCGGCTGAAGCT GCCGCGCGGGACGAAGGCCCGGGCCGAGGTCCGGATGGGGGAGATCACCCTCTGGGGCTCCGCCGGTGACCTGGTGCTGG TCACCGAGGGCGGCGGCATCACCGGGCGGGAGCTCTCCGGCGCGCGGGTCAGCGCCCGTAGCCGGACCGGCGACGTCAAC CTGCACTTCGACGGCCCGCCGGACGACCTGTCCGCGGTCAGCGAGGACGGCATGGTGACCCTCGTGTTGCCCGAGGACGA GTACGGGGTCGAGGCGGAGGCCGGGAACCCGCAGTCCGCGGTCGTCGACCTGCCGAGCGTGCCGGGTGCCGCGCGCCGGG TGCTGGCCCGCAGCGTCGCCGGCAGGATCAGGATCAGGCCCGCGTCACCGCGCGGCCCGGTGCGGATCTAG
Upstream 100 bases:
>100_bases CGAACATCTCACCGCGGACGGGACCTCGGGCCGGCGCCCGGTGCCGGCGGTAGCGGGTAGCGTTCGACCGTCCTGATCGG CGACCCGGTGGGGTCGCCGC
Downstream 100 bases:
>100_bases CGCCGACCCGGCGCCGCGGTGGTCGACACGGGCCCGGCAGGCCCTGTCCGGGGTGCGGGTCGCCGCCGGATTACTCTCTT CTGCATGACAGGGTCCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRRSCGGVVSDLVVVALGVALLVVTGSALILLRMPPERLERTVDEVTSVEVRLAAGRVEIGEYDRSDVAVEILARRRPGR ARPTMTRSGGVLRIDGRTSEVLARLKLPRGTKARAEVRMGEITLWGSAGDLVLVTEGGGITGRELSGARVSARSRTGDVN LHFDGPPDDLSAVSEDGMVTLVLPEDEYGVEAEAGNPQSAVVDLPSVPGAARRVLARSVAGRIRIRPASPRGPVRI
Sequences:
>Translated_236_residues MRRSCGGVVSDLVVVALGVALLVVTGSALILLRMPPERLERTVDEVTSVEVRLAAGRVEIGEYDRSDVAVEILARRRPGR ARPTMTRSGGVLRIDGRTSEVLARLKLPRGTKARAEVRMGEITLWGSAGDLVLVTEGGGITGRELSGARVSARSRTGDVN LHFDGPPDDLSAVSEDGMVTLVLPEDEYGVEAEAGNPQSAVVDLPSVPGAARRVLARSVAGRIRIRPASPRGPVRI >Mature_236_residues MRRSCGGVVSDLVVVALGVALLVVTGSALILLRMPPERLERTVDEVTSVEVRLAAGRVEIGEYDRSDVAVEILARRRPGR ARPTMTRSGGVLRIDGRTSEVLARLKLPRGTKARAEVRMGEITLWGSAGDLVLVTEGGGITGRELSGARVSARSRTGDVN LHFDGPPDDLSAVSEDGMVTLVLPEDEYGVEAEAGNPQSAVVDLPSVPGAARRVLARSVAGRIRIRPASPRGPVRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25011; Mature: 25011
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSCGGVVSDLVVVALGVALLVVTGSALILLRMPPERLERTVDEVTSVEVRLAAGRVEI CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHEEEEEEEECEEEE GEYDRSDVAVEILARRRPGRARPTMTRSGGVLRIDGRTSEVLARLKLPRGTKARAEVRMG CCCCCCHHHHHHHHHCCCCCCCCCEECCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEEE EITLWGSAGDLVLVTEGGGITGRELSGARVSARSRTGDVNLHFDGPPDDLSAVSEDGMVT EEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEECCCCHHHHHHCCCCEEE LVLPEDEYGVEAEAGNPQSAVVDLPSVPGAARRVLARSVAGRIRIRPASPRGPVRI EEECCCCCCCEECCCCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCCCCC >Mature Secondary Structure MRRSCGGVVSDLVVVALGVALLVVTGSALILLRMPPERLERTVDEVTSVEVRLAAGRVEI CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHEEEEEEEECEEEE GEYDRSDVAVEILARRRPGRARPTMTRSGGVLRIDGRTSEVLARLKLPRGTKARAEVRMG CCCCCCHHHHHHHHHCCCCCCCCCEECCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEEE EITLWGSAGDLVLVTEGGGITGRELSGARVSARSRTGDVNLHFDGPPDDLSAVSEDGMVT EEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEECCCCHHHHHHCCCCEEE LVLPEDEYGVEAEAGNPQSAVVDLPSVPGAARRVLARSVAGRIRIRPASPRGPVRI EEECCCCCCCEECCCCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA