Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316868

Identifier: 158316868

GI number: 158316868

Start: 6121870

End: 6122292

Strand: Reverse

Name: 158316868

Synonym: Franean1_5111

Alternate gene names: NA

Gene position: 6122292-6121870 (Counterclockwise)

Preceding gene: 158316869

Following gene: 158316864

Centisome position: 68.16

GC content: 70.21

Gene sequence:

>423_bases
ATGCCGCTCTCGGAGAACGAGCAGCGCCTACTGGAGCAGATCGAGCGCGCTCTCGTCGAGGACGATCCCAAGTTCGCGAG
CACGGTCCGGTCGACGAACCCCAGGACCTACCTCCTGCGGCGCGTGCGGCGCAGCGGGGTCCTGTTCGCGCTCGGTCTCG
TCGTCCTGGTCGTGGGTGTGGTCCTCAACCAGGTTCCCCTCACCGTGATCCTGGGGATCCTGGGGTTCCTGATGATGCTC
TTCGCGGCACTGCGGGGGGCGGCCGACCTGCGTCGGATCAGCGGCCGGGGCAACGACGTCGGTCGTCGCCCGCACGGGTC
GAAATCCAGGCCCGGTTCTGGCGGCCGGTCGCGCCCGGCGCGGCAGTCGTTCATGGAACGGGTGGAGGAGCGGTGGCGCC
GCCGCTGGGAGGACCGTCCCTGA

Upstream 100 bases:

>100_bases
ACACAGCATGACCTGTTGCCTACCGCCTCGGCCCCGCACATGCCTATTCTTGGGTGTCAGGTTCCGTCCGGCGGGCCTGA
AGGTCGTGGGAGGAGCGTCG

Downstream 100 bases:

>100_bases
TCGGGACCGCTCCCGGAGCCCGGCCAGGCTGAGCCCGGTGGCGAGCCGATCTCAGCCTGGTGGCTCAGACGAATTTTCGC
CCGAGCCCGGGCTGGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPLSENEQRLLEQIERALVEDDPKFASTVRSTNPRTYLLRRVRRSGVLFALGLVVLVVGVVLNQVPLTVILGILGFLMML
FAALRGAADLRRISGRGNDVGRRPHGSKSRPGSGGRSRPARQSFMERVEERWRRRWEDRP

Sequences:

>Translated_140_residues
MPLSENEQRLLEQIERALVEDDPKFASTVRSTNPRTYLLRRVRRSGVLFALGLVVLVVGVVLNQVPLTVILGILGFLMML
FAALRGAADLRRISGRGNDVGRRPHGSKSRPGSGGRSRPARQSFMERVEERWRRRWEDRP
>Mature_139_residues
PLSENEQRLLEQIERALVEDDPKFASTVRSTNPRTYLLRRVRRSGVLFALGLVVLVVGVVLNQVPLTVILGILGFLMMLF
AALRGAADLRRISGRGNDVGRRPHGSKSRPGSGGRSRPARQSFMERVEERWRRRWEDRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15903; Mature: 15772

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSENEQRLLEQIERALVEDDPKFASTVRSTNPRTYLLRRVRRSGVLFALGLVVLVVGV
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNQVPLTVILGILGFLMMLFAALRGAADLRRISGRGNDVGRRPHGSKSRPGSGGRSRPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RQSFMERVEERWRRRWEDRP
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PLSENEQRLLEQIERALVEDDPKFASTVRSTNPRTYLLRRVRRSGVLFALGLVVLVVGV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNQVPLTVILGILGFLMMLFAALRGAADLRRISGRGNDVGRRPHGSKSRPGSGGRSRPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RQSFMERVEERWRRRWEDRP
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA