| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316822
Identifier: 158316822
GI number: 158316822
Start: 6062728
End: 6063417
Strand: Reverse
Name: 158316822
Synonym: Franean1_5064
Alternate gene names: NA
Gene position: 6063417-6062728 (Counterclockwise)
Preceding gene: 158316823
Following gene: 158316821
Centisome position: 67.51
GC content: 71.01
Gene sequence:
>690_bases GTGCTGTTTCACCTCGCCGAGCCCGCGGCGCTGCTCGGGATCGTGCTCGCCTTCGTCATCGGCATCGTCGTCCACGACGG TGCGCAGATCCTCGCGGCCCGGCTGGCCCGTGACCCGATCCCGAGGCGCTCCGGGCGGCTGACCGCCGGGGTGGGCACCC AGCGGATCAGCCCGTTCAGCTGGGTCGGCGTGCTCATCGGCGGTGCCGGGTGGGCGGAGCCGATCCGGATGAACGACGTC TGGCGCAAGCGCCGTTTCCACGTGGCCGCTGCCCTGCTCGCGGGCCCGCTCTCCTACGCGCTGCTCGCGCTCGCGTCGCT CGCCGGCGCACGCGCGCTCACGCAGCGTGCAGTGATCGACACTGGGGACCGTGCGGCCGAGATCGTCGGCGGCACCTTCT CGGTGGAGCTGCTGCTGTGGATGGCGATCACCTTCGGGTCGTTGTGCATCCTCAGCCTCGTCCCGGTGCCGCCGACGGAC GGCGGGCGCATCCTGTTCCTACTCGGCCCGCAGTCCGAGGGCTGGCGCAAGGCGAACTACCGGCTCACCGAGGGCAACGT CGGGGTGGTGATCCTCCTCGCGGTGATCATCCTGCCGGTGCTGTTCCCCGGGTTCCCGTCGGTGATCGGTCAGCTGATCT GGCCGCTCATCCGCGGCCTGGGCTCCCTGATCGGGATCGATCTGCCGTAG
Upstream 100 bases:
>100_bases CCCGGCTGACCTGTCGGCCAGCCGGTGGGCCGGCAGGCAGCGGGACCCGGTCGGCGGGTCCTGGAGGTTAGGACGACGGA TCGGGGACGGACGACAAGCC
Downstream 100 bases:
>100_bases GCGGGCCCAGGTGAGTGCGGCCGGTGTGCACGTCGGGACGATACGTCACAGGGCGTAACGTGGCCGTATGAGCTCGTCCG GGACAGACACGGCCACCGGT
Product: peptidase M50
Products: NA
Alternate protein names: Peptidase M
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLFHLAEPAALLGIVLAFVIGIVVHDGAQILAARLARDPIPRRSGRLTAGVGTQRISPFSWVGVLIGGAGWAEPIRMNDV WRKRRFHVAAALLAGPLSYALLALASLAGARALTQRAVIDTGDRAAEIVGGTFSVELLLWMAITFGSLCILSLVPVPPTD GGRILFLLGPQSEGWRKANYRLTEGNVGVVILLAVIILPVLFPGFPSVIGQLIWPLIRGLGSLIGIDLP
Sequences:
>Translated_229_residues MLFHLAEPAALLGIVLAFVIGIVVHDGAQILAARLARDPIPRRSGRLTAGVGTQRISPFSWVGVLIGGAGWAEPIRMNDV WRKRRFHVAAALLAGPLSYALLALASLAGARALTQRAVIDTGDRAAEIVGGTFSVELLLWMAITFGSLCILSLVPVPPTD GGRILFLLGPQSEGWRKANYRLTEGNVGVVILLAVIILPVLFPGFPSVIGQLIWPLIRGLGSLIGIDLP >Mature_229_residues MLFHLAEPAALLGIVLAFVIGIVVHDGAQILAARLARDPIPRRSGRLTAGVGTQRISPFSWVGVLIGGAGWAEPIRMNDV WRKRRFHVAAALLAGPLSYALLALASLAGARALTQRAVIDTGDRAAEIVGGTFSVELLLWMAITFGSLCILSLVPVPPTD GGRILFLLGPQSEGWRKANYRLTEGNVGVVILLAVIILPVLFPGFPSVIGQLIWPLIRGLGSLIGIDLP
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24285; Mature: 24285
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHLAEPAALLGIVLAFVIGIVVHDGAQILAARLARDPIPRRSGRLTAGVGTQRISPFS CEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHH WVGVLIGGAGWAEPIRMNDVWRKRRFHVAAALLAGPLSYALLALASLAGARALTQRAVID HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGDRAAEIVGGTFSVELLLWMAITFGSLCILSLVPVPPTDGGRILFLLGPQSEGWRKANY CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC RLTEGNVGVVILLAVIILPVLFPGFPSVIGQLIWPLIRGLGSLIGIDLP EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLFHLAEPAALLGIVLAFVIGIVVHDGAQILAARLARDPIPRRSGRLTAGVGTQRISPFS CEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHH WVGVLIGGAGWAEPIRMNDVWRKRRFHVAAALLAGPLSYALLALASLAGARALTQRAVID HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGDRAAEIVGGTFSVELLLWMAITFGSLCILSLVPVPPTDGGRILFLLGPQSEGWRKANY CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC RLTEGNVGVVILLAVIILPVLFPGFPSVIGQLIWPLIRGLGSLIGIDLP EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA