Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316769

Identifier: 158316769

GI number: 158316769

Start: 6005457

End: 6006008

Strand: Reverse

Name: 158316769

Synonym: Franean1_5008

Alternate gene names: NA

Gene position: 6006008-6005457 (Counterclockwise)

Preceding gene: 158316770

Following gene: 158316767

Centisome position: 66.87

GC content: 70.11

Gene sequence:

>552_bases
GTGGAGAACTTGCCCAAGCATTACACGGTGCTCCTCCAGCAGGAGCGCACCATCCGCGAGACCCGGGTCGACACCTGGCA
CGGCCTTGCCGACAGCCCCGAGGACGCCCGGGACCAGGCCGACCACGCCCCACGAGCCTGGGGCACGGCCAGTCGGGTCG
TCCTCAGCACCAGCCCCGCGGACTCGGAAGACGTGCTGACCTTTACGGCGTCCCGGTTCTTCCCGAGCCGTTCACTGCTC
GAGGCCGCCGGCCGACTCGTCCCGGGTGGGCCGGGAGATGTTCGAGGCCAGATCGCGGACGCCGTCGAGGAGATCCACAC
CGACACCGCCGGCATCGCGAAGATCGCGGATCGGTGTGGGTTCTACCGGGACCTGACCTGGCGCCTGTACGGCACGGGCT
GGCGCTGGGCGGAGATGGCCGGTCTGCGGACCGACCTCGTGGTCGAAGGCAACCGTGATCCCGACGACAACGGGCCGTGC
ATTGACCGTGACGCCGGGTGCTGCGCGTGCACCCGACACTGGGGTGCCTGGTCGAGGCCAGCGGAGGGCTGA

Upstream 100 bases:

>100_bases
CCACTACAAGACGCACGCCGCGTCGACCGCATGACAGCGGCCGGGCGCGGGGGGTGACCAACCCGTACCCCGCAACCCGG
CCGAGATGTCCCCCTGAGAA

Downstream 100 bases:

>100_bases
CCTCCGGCCCACCGAAGACCCGCGGCTCCGTGCGGACGACCCGCGTCCCGGAGTTCGTCTTCGACATGATCGATGCCCGC
CTGGACATGATGCCGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPADSEDVLTFTASRFFPSRSLL
EAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCGFYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPC
IDRDAGCCACTRHWGAWSRPAEG

Sequences:

>Translated_183_residues
MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPADSEDVLTFTASRFFPSRSLL
EAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCGFYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPC
IDRDAGCCACTRHWGAWSRPAEG
>Mature_183_residues
MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPADSEDVLTFTASRFFPSRSLL
EAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCGFYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPC
IDRDAGCCACTRHWGAWSRPAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20208; Mature: 20208

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCC
DSEDVLTFTASRFFPSRSLLEAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCG
CCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
FYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPCIDRDAGCCACTRHWGAWSRP
CHHCCEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
AEG
CCC
>Mature Secondary Structure
MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCC
DSEDVLTFTASRFFPSRSLLEAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCG
CCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
FYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPCIDRDAGCCACTRHWGAWSRP
CHHCCEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
AEG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA