| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316769
Identifier: 158316769
GI number: 158316769
Start: 6005457
End: 6006008
Strand: Reverse
Name: 158316769
Synonym: Franean1_5008
Alternate gene names: NA
Gene position: 6006008-6005457 (Counterclockwise)
Preceding gene: 158316770
Following gene: 158316767
Centisome position: 66.87
GC content: 70.11
Gene sequence:
>552_bases GTGGAGAACTTGCCCAAGCATTACACGGTGCTCCTCCAGCAGGAGCGCACCATCCGCGAGACCCGGGTCGACACCTGGCA CGGCCTTGCCGACAGCCCCGAGGACGCCCGGGACCAGGCCGACCACGCCCCACGAGCCTGGGGCACGGCCAGTCGGGTCG TCCTCAGCACCAGCCCCGCGGACTCGGAAGACGTGCTGACCTTTACGGCGTCCCGGTTCTTCCCGAGCCGTTCACTGCTC GAGGCCGCCGGCCGACTCGTCCCGGGTGGGCCGGGAGATGTTCGAGGCCAGATCGCGGACGCCGTCGAGGAGATCCACAC CGACACCGCCGGCATCGCGAAGATCGCGGATCGGTGTGGGTTCTACCGGGACCTGACCTGGCGCCTGTACGGCACGGGCT GGCGCTGGGCGGAGATGGCCGGTCTGCGGACCGACCTCGTGGTCGAAGGCAACCGTGATCCCGACGACAACGGGCCGTGC ATTGACCGTGACGCCGGGTGCTGCGCGTGCACCCGACACTGGGGTGCCTGGTCGAGGCCAGCGGAGGGCTGA
Upstream 100 bases:
>100_bases CCACTACAAGACGCACGCCGCGTCGACCGCATGACAGCGGCCGGGCGCGGGGGGTGACCAACCCGTACCCCGCAACCCGG CCGAGATGTCCCCCTGAGAA
Downstream 100 bases:
>100_bases CCTCCGGCCCACCGAAGACCCGCGGCTCCGTGCGGACGACCCGCGTCCCGGAGTTCGTCTTCGACATGATCGATGCCCGC CTGGACATGATGCCGAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPADSEDVLTFTASRFFPSRSLL EAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCGFYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPC IDRDAGCCACTRHWGAWSRPAEG
Sequences:
>Translated_183_residues MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPADSEDVLTFTASRFFPSRSLL EAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCGFYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPC IDRDAGCCACTRHWGAWSRPAEG >Mature_183_residues MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPADSEDVLTFTASRFFPSRSLL EAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCGFYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPC IDRDAGCCACTRHWGAWSRPAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20208; Mature: 20208
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCC DSEDVLTFTASRFFPSRSLLEAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCG CCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC FYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPCIDRDAGCCACTRHWGAWSRP CHHCCEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC AEG CCC >Mature Secondary Structure MENLPKHYTVLLQQERTIRETRVDTWHGLADSPEDARDQADHAPRAWGTASRVVLSTSPA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCC DSEDVLTFTASRFFPSRSLLEAAGRLVPGGPGDVRGQIADAVEEIHTDTAGIAKIADRCG CCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC FYRDLTWRLYGTGWRWAEMAGLRTDLVVEGNRDPDDNGPCIDRDAGCCACTRHWGAWSRP CHHCCEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC AEG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA