| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mpg1 [H]
Identifier: 158316764
GI number: 158316764
Start: 5997720
End: 6000251
Strand: Reverse
Name: mpg1 [H]
Synonym: Franean1_5002
Alternate gene names: 158316764
Gene position: 6000251-5997720 (Counterclockwise)
Preceding gene: 158316765
Following gene: 158316763
Centisome position: 66.8
GC content: 71.92
Gene sequence:
>2532_bases TTGAGAGCCGTCGTGATGGCGGGCGGCGAGGGCACCCGGCTGCGGCCGCTGACCGCGAACCTGCCGAAGCCCCTGCTGCC GGTCGTCAACCGCCCGATCATGGAGCACGTCCTGCGGCTGCTCAAGCGGCACGGTTTCGACGAGACCGTGGTGACGGTCC AGTTCCTCGCAGCGATGATCCGCAACTACTTCGGCTCCGGTGACGAGCTGGGCATGCACCTGTCCTACGCGACGGAGACC ACGCCGCTGGGCACCGCGGGCAGCGTGAAGAACGCCGAGGACGCGCTGCGCCACGAGGAGTTCCTGGTCATCAGCGGTGA CGCCCTGACCGACATCGACCTGACCGACCTCGTCGCCTACCACCGGGCGCAGGGCGCGCTGGTCACCGTCGCGCTCAAGT CGGTGCCCGACCCGCTCGAGTTCGGCATCGTGATCACCGGCGAGGACGGGCGGATCTCCCGGTTCCTGGAGAAGCCGACC TGGGGCCAGGTGTTCTCCGACACCGTCAACACCGGCATCTACGTGATGGAGCCGGAGGTCCTCGACCACGTCCCGGCCGG CGAGGCGGTCGACTGGTCCGGGGATGTCTTCCCCCGGCTGGTCGCCGCCGGGGCGCCGGTGTTCGGCTACGTCGCCGGCG GCTACTGGGAGGACGTCGGCACCATCGCCAGCTTCCAGCGCGCGCAGGCGGACGTGCTGAACCGGCAGGTGGACGTCTCG ATCGGCGGGTTCGAGGTCTCCCCGGGGGTCTGGATCGGCGAGGACGCCGACGTCCACCCCGACGCGATCCTCAAGGGCCC GCTGGTCGTCGGCGACTACAGCAAGGTCGAGGCCGGCGCCGAGCTGCGCGAGTTCACCGTGCTCGGCAGCAACGTGGTGG TGAAGCGGGGGGCCTTCCTGCACCGGGTGGTCGTCCAGGACAACGCGCTCATCGGCCCGCGGACGAACCTGCGCGGCTGC GTGATCGGCAAGAGCACGGACGTGCTGCGGGCCGCGCGCATAGAGGAGGGCGCGGTCATCGGCGACGAGTGCGTCATCCA GGAGGAGGCGTTCGTCTCCCATGACGTCAAGGTCTACCCGTTCAAGACCATCGAGGCCGGGGCGGTCGTCAACACCAGCG TCATCTGGGAGTCGCGCGGGCAGCGGTCGCTGTTCGGCCCACGCGGGGTCTCCGGACTGGTCAACGCGGAGATCACCCCG GAGCTGGTGGTCCGCCTGGCCAGCGCGTACGCGACGACGCTGAAGAAGGGCTCCACCGTCACCACCGCGCGGGACGGCTC GCGCGCGGCCCGGGCCCTCAAACGGGCCGTGATCAGCGCCCTCACCGCCGGCGCGATCAATGTCCGTGACCTGGAGGTGG CCCCGCTGCCGGTCGCGCGCTTCGACGTCCGCACCTCGGACGCGGCCGGCGGGATCATGCTGCGCTCCAAGCCGGGCGAC GCCGAGCGCATCGACATCGTCTTCCTCGACGCCGACGGCGACGATCTCTCCCCGGCCGCGCAGCGCAAGCTCGACCGCGT GTTCACCCGGCAGGAGTTCCGCCGCGCGTTCCCCGGCGAGATCGGCGACCTGCGCTTCCCGGCGCGCACGGCCGACGTCT ACACCCAGGACCTGCTCGACCGGGTGGACACCAGCGGGCTCGCCGAGGCGGATCTCAAGGTGGTCGTCGACCCGTCCGGG GGAGCGGCGTCGCTGCTGCTGCCCACCCTGCTCGGCCGGCTCGGCGTCGACGTGCTGACCGTCAACGGCCGGCTGGACGA GACCTACCCCGAGCCCGGCGCCGAGCAGGAGCGCAGGGCTCTGGACCGGCTGGGCGCGCTCGTGGCGAGCTCACGCGCCG CGTTCGGGGTCCGCTTCGACCACATCGGCGAGCGGATCACCATCGTCGACGAGCGCGGCGACCTCATCAGCGACGAGCGG GCCCTGCTGGTCATGCTCGACCTCGTCGCGGCGGAGAACCGCGGCGCCCAGGCGGCGGTGCCCGTCACCACCACCCGGGT CGCCGACCAGGTGGGGCGCTTCCACGGCCTGACCGTGCGGCGGATGTCGATGTCCGGCTCCGAGCTCTCCCGGGTCGTGC AGGCCGAGCCGATCGTCTTCGCCGCCGACGGGCGGGGCGGATTCGTCGTGCCGGAGTTCGCTCCCGTGATCGACGGCCTG GCGGCGTTCGTCCGGCTGGTCGCGCTGGTCGCCCGGACCAGGCTGACGCTCAGCGCGATAGACGCGCGGATCCCTCCGGT CGCGATGGTGCGGGCGTCGGTGCCCACACCGTGGGCGGAGAAGGGCACTGTCATGCGCCGCGTCGTCGAGTCGGTGGACG TCGACTCGGGCGACCAGGTCGACACCACCGACGGGGTGCGCGTCGTCGGCCCGGACGGATCCTGGGTGCTGGTGCTGCCC GACCCGTCCGAGGCGGTGACCCATCTGTGGGCCGAGGCGGCGGATCTGGGCGGCGCGCAGAAGCTGGTGCGCCGGTGGAG CGCCGTCGTGGAGACGGTGCCGCCGGAGCAGGCTCCCGTCACCCGTTCATGA
Upstream 100 bases:
>100_bases CTCTTTACTGGTGGTCCGGCCTCCTCTACGCAGAACAGGCCCGCCGGCTGGCCGGGGAACGCGCCCGCCTGGCCGCGGCG CGAAAATAGGGAGGTAACCC
Downstream 100 bases:
>100_bases TCGTAACGGCTTCCCGGCGGCGGAACGCGACGGGTATGCCACAGTGGCCAGCCGGCCGTCGGAGAGAATGCCGGATGTGC ACGGACGGACACGGCTGACC
Product: nucleotidyl transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 843; Mature: 843
Protein sequence:
>843_residues MRAVVMAGGEGTRLRPLTANLPKPLLPVVNRPIMEHVLRLLKRHGFDETVVTVQFLAAMIRNYFGSGDELGMHLSYATET TPLGTAGSVKNAEDALRHEEFLVISGDALTDIDLTDLVAYHRAQGALVTVALKSVPDPLEFGIVITGEDGRISRFLEKPT WGQVFSDTVNTGIYVMEPEVLDHVPAGEAVDWSGDVFPRLVAAGAPVFGYVAGGYWEDVGTIASFQRAQADVLNRQVDVS IGGFEVSPGVWIGEDADVHPDAILKGPLVVGDYSKVEAGAELREFTVLGSNVVVKRGAFLHRVVVQDNALIGPRTNLRGC VIGKSTDVLRAARIEEGAVIGDECVIQEEAFVSHDVKVYPFKTIEAGAVVNTSVIWESRGQRSLFGPRGVSGLVNAEITP ELVVRLASAYATTLKKGSTVTTARDGSRAARALKRAVISALTAGAINVRDLEVAPLPVARFDVRTSDAAGGIMLRSKPGD AERIDIVFLDADGDDLSPAAQRKLDRVFTRQEFRRAFPGEIGDLRFPARTADVYTQDLLDRVDTSGLAEADLKVVVDPSG GAASLLLPTLLGRLGVDVLTVNGRLDETYPEPGAEQERRALDRLGALVASSRAAFGVRFDHIGERITIVDERGDLISDER ALLVMLDLVAAENRGAQAAVPVTTTRVADQVGRFHGLTVRRMSMSGSELSRVVQAEPIVFAADGRGGFVVPEFAPVIDGL AAFVRLVALVARTRLTLSAIDARIPPVAMVRASVPTPWAEKGTVMRRVVESVDVDSGDQVDTTDGVRVVGPDGSWVLVLP DPSEAVTHLWAEAADLGGAQKLVRRWSAVVETVPPEQAPVTRS
Sequences:
>Translated_843_residues MRAVVMAGGEGTRLRPLTANLPKPLLPVVNRPIMEHVLRLLKRHGFDETVVTVQFLAAMIRNYFGSGDELGMHLSYATET TPLGTAGSVKNAEDALRHEEFLVISGDALTDIDLTDLVAYHRAQGALVTVALKSVPDPLEFGIVITGEDGRISRFLEKPT WGQVFSDTVNTGIYVMEPEVLDHVPAGEAVDWSGDVFPRLVAAGAPVFGYVAGGYWEDVGTIASFQRAQADVLNRQVDVS IGGFEVSPGVWIGEDADVHPDAILKGPLVVGDYSKVEAGAELREFTVLGSNVVVKRGAFLHRVVVQDNALIGPRTNLRGC VIGKSTDVLRAARIEEGAVIGDECVIQEEAFVSHDVKVYPFKTIEAGAVVNTSVIWESRGQRSLFGPRGVSGLVNAEITP ELVVRLASAYATTLKKGSTVTTARDGSRAARALKRAVISALTAGAINVRDLEVAPLPVARFDVRTSDAAGGIMLRSKPGD AERIDIVFLDADGDDLSPAAQRKLDRVFTRQEFRRAFPGEIGDLRFPARTADVYTQDLLDRVDTSGLAEADLKVVVDPSG GAASLLLPTLLGRLGVDVLTVNGRLDETYPEPGAEQERRALDRLGALVASSRAAFGVRFDHIGERITIVDERGDLISDER ALLVMLDLVAAENRGAQAAVPVTTTRVADQVGRFHGLTVRRMSMSGSELSRVVQAEPIVFAADGRGGFVVPEFAPVIDGL AAFVRLVALVARTRLTLSAIDARIPPVAMVRASVPTPWAEKGTVMRRVVESVDVDSGDQVDTTDGVRVVGPDGSWVLVLP DPSEAVTHLWAEAADLGGAQKLVRRWSAVVETVPPEQAPVTRS >Mature_843_residues MRAVVMAGGEGTRLRPLTANLPKPLLPVVNRPIMEHVLRLLKRHGFDETVVTVQFLAAMIRNYFGSGDELGMHLSYATET TPLGTAGSVKNAEDALRHEEFLVISGDALTDIDLTDLVAYHRAQGALVTVALKSVPDPLEFGIVITGEDGRISRFLEKPT WGQVFSDTVNTGIYVMEPEVLDHVPAGEAVDWSGDVFPRLVAAGAPVFGYVAGGYWEDVGTIASFQRAQADVLNRQVDVS IGGFEVSPGVWIGEDADVHPDAILKGPLVVGDYSKVEAGAELREFTVLGSNVVVKRGAFLHRVVVQDNALIGPRTNLRGC VIGKSTDVLRAARIEEGAVIGDECVIQEEAFVSHDVKVYPFKTIEAGAVVNTSVIWESRGQRSLFGPRGVSGLVNAEITP ELVVRLASAYATTLKKGSTVTTARDGSRAARALKRAVISALTAGAINVRDLEVAPLPVARFDVRTSDAAGGIMLRSKPGD AERIDIVFLDADGDDLSPAAQRKLDRVFTRQEFRRAFPGEIGDLRFPARTADVYTQDLLDRVDTSGLAEADLKVVVDPSG GAASLLLPTLLGRLGVDVLTVNGRLDETYPEPGAEQERRALDRLGALVASSRAAFGVRFDHIGERITIVDERGDLISDER ALLVMLDLVAAENRGAQAAVPVTTTRVADQVGRFHGLTVRRMSMSGSELSRVVQAEPIVFAADGRGGFVVPEFAPVIDGL AAFVRLVALVARTRLTLSAIDARIPPVAMVRASVPTPWAEKGTVMRRVVESVDVDSGDQVDTTDGVRVVGPDGSWVLVLP DPSEAVTHLWAEAADLGGAQKLVRRWSAVVETVPPEQAPVTRS
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=374, Percent_Identity=28.0748663101604, Blast_Score=165, Evalue=2e-40, Organism=Homo sapiens, GI11761619, Length=391, Percent_Identity=29.4117647058824, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI31881779, Length=377, Percent_Identity=25.4641909814324, Blast_Score=101, Evalue=3e-21, Organism=Homo sapiens, GI45447090, Length=377, Percent_Identity=25.4641909814324, Blast_Score=101, Evalue=3e-21, Organism=Homo sapiens, GI9966779, Length=149, Percent_Identity=33.5570469798658, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI262205273, Length=149, Percent_Identity=33.5570469798658, Blast_Score=70, Evalue=9e-12, Organism=Escherichia coli, GI1790224, Length=189, Percent_Identity=30.6878306878307, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789837, Length=395, Percent_Identity=23.7974683544304, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1788351, Length=184, Percent_Identity=27.7173913043478, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI133931050, Length=368, Percent_Identity=29.3478260869565, Blast_Score=175, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17509979, Length=322, Percent_Identity=26.3975155279503, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17509981, Length=311, Percent_Identity=25.4019292604502, Blast_Score=97, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320148, Length=374, Percent_Identity=28.0748663101604, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI21355443, Length=370, Percent_Identity=29.4594594594595, Blast_Score=167, Evalue=3e-41, Organism=Drosophila melanogaster, GI24644084, Length=370, Percent_Identity=29.4594594594595, Blast_Score=167, Evalue=3e-41, Organism=Drosophila melanogaster, GI24653912, Length=360, Percent_Identity=25, Blast_Score=91, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 90288; Mature: 90288
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVVMAGGEGTRLRPLTANLPKPLLPVVNRPIMEHVLRLLKRHGFDETVVTVQFLAAMI CCEEEEECCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RNYFGSGDELGMHLSYATETTPLGTAGSVKNAEDALRHEEFLVISGDALTDIDLTDLVAY HHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHH HRAQGALVTVALKSVPDPLEFGIVITGEDGRISRFLEKPTWGQVFSDTVNTGIYVMEPEV HHCCCCEEEEEECCCCCCHHEEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCEEEECCHH LDHVPAGEAVDWSGDVFPRLVAAGAPVFGYVAGGYWEDVGTIASFQRAQADVLNRQVDVS HHCCCCCCCCCCCCCHHHHHHHCCCCCEEHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEE IGGFEVSPGVWIGEDADVHPDAILKGPLVVGDYSKVEAGAELREFTVLGSNVVVKRGAFL ECCEEECCCEEECCCCCCCCCCEEECCEEECCCHHHHCCCHHEEEEEECCCEEEECCCCE HRVVVQDNALIGPRTNLRGCVIGKSTDVLRAARIEEGAVIGDECVIQEEAFVSHDVKVYP EEEEECCCCEECCCCCCCEEEECCCCCHHHHHHCCCCCEECCHHEEEHHHHHCCCCEEEE FKTIEAGAVVNTSVIWESRGQRSLFGPRGVSGLVNAEITPELVVRLASAYATTLKKGSTV EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE TTARDGSRAARALKRAVISALTAGAINVRDLEVAPLPVARFDVRTSDAAGGIMLRSKPGD EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEECCCCC AERIDIVFLDADGDDLSPAAQRKLDRVFTRQEFRRAFPGEIGDLRFPARTADVYTQDLLD CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH RVDTSGLAEADLKVVVDPSGGAASLLLPTLLGRLGVDVLTVNGRLDETYPEPGAEQERRA HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHH LDRLGALVASSRAAFGVRFDHIGERITIVDERGDLISDERALLVMLDLVAAENRGAQAAV HHHHHHHHHCCCHHCCEEHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEC PVTTTRVADQVGRFHGLTVRRMSMSGSELSRVVQAEPIVFAADGRGGFVVPEFAPVIDGL CEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHH AAFVRLVALVARTRLTLSAIDARIPPVAMVRASVPTPWAEKGTVMRRVVESVDVDSGDQV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC DTTDGVRVVGPDGSWVLVLPDPSEAVTHLWAEAADLGGAQKLVRRWSAVVETVPPEQAPV CCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC TRS CCC >Mature Secondary Structure MRAVVMAGGEGTRLRPLTANLPKPLLPVVNRPIMEHVLRLLKRHGFDETVVTVQFLAAMI CCEEEEECCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RNYFGSGDELGMHLSYATETTPLGTAGSVKNAEDALRHEEFLVISGDALTDIDLTDLVAY HHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHH HRAQGALVTVALKSVPDPLEFGIVITGEDGRISRFLEKPTWGQVFSDTVNTGIYVMEPEV HHCCCCEEEEEECCCCCCHHEEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCEEEECCHH LDHVPAGEAVDWSGDVFPRLVAAGAPVFGYVAGGYWEDVGTIASFQRAQADVLNRQVDVS HHCCCCCCCCCCCCCHHHHHHHCCCCCEEHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEE IGGFEVSPGVWIGEDADVHPDAILKGPLVVGDYSKVEAGAELREFTVLGSNVVVKRGAFL ECCEEECCCEEECCCCCCCCCCEEECCEEECCCHHHHCCCHHEEEEEECCCEEEECCCCE HRVVVQDNALIGPRTNLRGCVIGKSTDVLRAARIEEGAVIGDECVIQEEAFVSHDVKVYP EEEEECCCCEECCCCCCCEEEECCCCCHHHHHHCCCCCEECCHHEEEHHHHHCCCCEEEE FKTIEAGAVVNTSVIWESRGQRSLFGPRGVSGLVNAEITPELVVRLASAYATTLKKGSTV EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE TTARDGSRAARALKRAVISALTAGAINVRDLEVAPLPVARFDVRTSDAAGGIMLRSKPGD EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEECCCCC AERIDIVFLDADGDDLSPAAQRKLDRVFTRQEFRRAFPGEIGDLRFPARTADVYTQDLLD CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH RVDTSGLAEADLKVVVDPSGGAASLLLPTLLGRLGVDVLTVNGRLDETYPEPGAEQERRA HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHH LDRLGALVASSRAAFGVRFDHIGERITIVDERGDLISDERALLVMLDLVAAENRGAQAAV HHHHHHHHHCCCHHCCEEHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEC PVTTTRVADQVGRFHGLTVRRMSMSGSELSRVVQAEPIVFAADGRGGFVVPEFAPVIDGL CEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHH AAFVRLVALVARTRLTLSAIDARIPPVAMVRASVPTPWAEKGTVMRRVVESVDVDSGDQV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC DTTDGVRVVGPDGSWVLVLPDPSEAVTHLWAEAADLGGAQKLVRRWSAVVETVPPEQAPV CCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC TRS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]