| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316759
Identifier: 158316759
GI number: 158316759
Start: 5994104
End: 5994769
Strand: Reverse
Name: 158316759
Synonym: Franean1_4997
Alternate gene names: NA
Gene position: 5994769-5994104 (Counterclockwise)
Preceding gene: 158316760
Following gene: 158316758
Centisome position: 66.74
GC content: 70.87
Gene sequence:
>666_bases GTGAGTGCCCGGTCACATCGGGTCAGGCCCCTGTCGAGGAACATTCCTGCCGCCGTTAGGGCGGCGGACCGAGCGGCCGG GCTCCCGCCTGCGGGCATCCGGCAGGAAGCGGACGAGACTGTGTTCTGCACGAGGTGCGGCCAGCAGAACCCGTCCGACG CGCTGTACTGCGCGCGGTGCGGGTCGCCTCTGGTGCGTCCGGGCGAGCCCGTGGCGCCGGAGCGACCCGCGGAGCAGACG TCGACGCTCAACCTGGCCGCCGCGCTCTCCGGCATCGAGGGTGACCACGTCGACGAGTCGACCGAGCGCGACGCCGTCGC CGCCGTCGACGCGCTTCCGCCCGGCTCGGCCCTGTTGGTCGTCAAGCGAGGCCCGAACGCGGGCAGCCGGTTCCTTCTCG ACGCCGATCTCACCACCGTCGGGCGCCATCCGGAGAGCGACATCTTCCTCGACGACGTCACGGTCTCCCGGCGGCATGCC GAGTTCCACCGGTCGCCCTACACCAAGGGATTCTCCGTGCGTGACGTCGGCAGCCTGAACGGTACCTACCTGAACCGGGA GCGGATCGACTCCGCGGAGCTCACCGGCGGCGACGAGGTCCAGATCGGCAAGTTCCGCCTGGTCTTCCTGACGGGCGCGA CCTATGGGGGGGTCGGGGTTCGGTGA
Upstream 100 bases:
>100_bases GACGCACCCTTTTCACGACGGTGCGCCTGATGCACTAGCCTCGAAGTGCGCCGTGACGGCATCGGCCGCGGACACCGCCG CGTTCGGCCGTTCGCGCGGG
Downstream 100 bases:
>100_bases ACAGGTCCACGACGAGGTGAGCGGCGGCAGCAGTGCCGCGGCGGAACCCATGCGCTCGTCCGGTCGTGCGGAGGAGTCCC GGCCGGGATCGTCGCGGCGG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSARSHRVRPLSRNIPAAVRAADRAAGLPPAGIRQEADETVFCTRCGQQNPSDALYCARCGSPLVRPGEPVAPERPAEQT STLNLAAALSGIEGDHVDESTERDAVAAVDALPPGSALLVVKRGPNAGSRFLLDADLTTVGRHPESDIFLDDVTVSRRHA EFHRSPYTKGFSVRDVGSLNGTYLNRERIDSAELTGGDEVQIGKFRLVFLTGATYGGVGVR
Sequences:
>Translated_221_residues MSARSHRVRPLSRNIPAAVRAADRAAGLPPAGIRQEADETVFCTRCGQQNPSDALYCARCGSPLVRPGEPVAPERPAEQT STLNLAAALSGIEGDHVDESTERDAVAAVDALPPGSALLVVKRGPNAGSRFLLDADLTTVGRHPESDIFLDDVTVSRRHA EFHRSPYTKGFSVRDVGSLNGTYLNRERIDSAELTGGDEVQIGKFRLVFLTGATYGGVGVR >Mature_220_residues SARSHRVRPLSRNIPAAVRAADRAAGLPPAGIRQEADETVFCTRCGQQNPSDALYCARCGSPLVRPGEPVAPERPAEQTS TLNLAAALSGIEGDHVDESTERDAVAAVDALPPGSALLVVKRGPNAGSRFLLDADLTTVGRHPESDIFLDDVTVSRRHAE FHRSPYTKGFSVRDVGSLNGTYLNRERIDSAELTGGDEVQIGKFRLVFLTGATYGGVGVR
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FHA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000253 - InterPro: IPR008984 [H]
Pfam domain/function: PF00498 FHA [H]
EC number: NA
Molecular weight: Translated: 23561; Mature: 23429
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARSHRVRPLSRNIPAAVRAADRAAGLPPAGIRQEADETVFCTRCGQQNPSDALYCARC CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECC GSPLVRPGEPVAPERPAEQTSTLNLAAALSGIEGDHVDESTERDAVAAVDALPPGSALLV CCCCCCCCCCCCCCCCCCHHHHEEHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEE VKRGPNAGSRFLLDADLTTVGRHPESDIFLDDVTVSRRHAEFHRSPYTKGFSVRDVGSLN EECCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCEEECCCCC GTYLNRERIDSAELTGGDEVQIGKFRLVFLTGATYGGVGVR CEEECHHHCCCCCCCCCCEEEECEEEEEEEECCCCCCCCCC >Mature Secondary Structure SARSHRVRPLSRNIPAAVRAADRAAGLPPAGIRQEADETVFCTRCGQQNPSDALYCARC CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECC GSPLVRPGEPVAPERPAEQTSTLNLAAALSGIEGDHVDESTERDAVAAVDALPPGSALLV CCCCCCCCCCCCCCCCCCHHHHEEHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEE VKRGPNAGSRFLLDADLTTVGRHPESDIFLDDVTVSRRHAEFHRSPYTKGFSVRDVGSLN EECCCCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCEEECCCCC GTYLNRERIDSAELTGGDEVQIGKFRLVFLTGATYGGVGVR CEEECHHHCCCCCCCCCCEEEECEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]