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The map label for this gene is ytfH [C]

Identifier: 158316581

GI number: 158316581

Start: 5751352

End: 5751753

Strand: Reverse

Name: ytfH [C]

Synonym: Franean1_4817

Alternate gene names: 158316581

Gene position: 5751753-5751352 (Counterclockwise)

Preceding gene: 158316585

Following gene: 158316580

Centisome position: 64.04

GC content: 69.4

Gene sequence:

>402_bases
ATGCAAACGTGGTCCGCCGGTTGGACGGCCGGTTCCCGCGGTCCGCTCGAGGGCGATTCCCAGGGCGGGGCGGCAGGCCG
TGCCCGGGAGATCGTCGGCCGGGTGGGCGACAAATGGACGGTGGCGGTGGTGCACGCGCTCGGAAACGGGCCGCTGCGAT
TCACCGAGATCCGGCGCGGCGTTGACGGCATCAGCCAGCGGATGCTCACGACCACGTTGCGGGCGCTGGAGCGTGATGGT
CTGGTCCTCCGCACGGTCTATCCCGAGATACCGCCCCGGGTGGACTACGAGCTCACCCCGGTCGGCCGGTCGCTGCTGGA
CACCCTCTGGCTGCTGATGAACTGGGCGGTGGTGCACACCGAGGACATAGACCGGGCCAGGCGGGAGTACGACGCGAAAT
AG

Upstream 100 bases:

>100_bases
GGCGGAGTCCTTTCCGCCCGCTCACACGCGGCGAGGCAGGGCCGCAAGCGAGGCCCGGTCGGTGAGAGGGTGGAAGGCCG
TGAAGGGTGGTGATCGGGTC

Downstream 100 bases:

>100_bases
CTCGGGAACCGTCCCGCGGACTGCGGACGGATTCGCGGGCATTCCGGAGTGTGGGAGGTCTTAGGGGTAGGCATCGGCAT
GTGTGCCCAGGGATGGTGCT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MQTWSAGWTAGSRGPLEGDSQGGAAGRAREIVGRVGDKWTVAVVHALGNGPLRFTEIRRGVDGISQRMLTTTLRALERDG
LVLRTVYPEIPPRVDYELTPVGRSLLDTLWLLMNWAVVHTEDIDRARREYDAK

Sequences:

>Translated_133_residues
MQTWSAGWTAGSRGPLEGDSQGGAAGRAREIVGRVGDKWTVAVVHALGNGPLRFTEIRRGVDGISQRMLTTTLRALERDG
LVLRTVYPEIPPRVDYELTPVGRSLLDTLWLLMNWAVVHTEDIDRARREYDAK
>Mature_133_residues
MQTWSAGWTAGSRGPLEGDSQGGAAGRAREIVGRVGDKWTVAVVHALGNGPLRFTEIRRGVDGISQRMLTTTLRALERDG
LVLRTVYPEIPPRVDYELTPVGRSLLDTLWLLMNWAVVHTEDIDRARREYDAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=105, Percent_Identity=36.1904761904762, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14798; Mature: 14798

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTWSAGWTAGSRGPLEGDSQGGAAGRAREIVGRVGDKWTVAVVHALGNGPLRFTEIRRG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
VDGISQRMLTTTLRALERDGLVLRTVYPEIPPRVDYELTPVGRSLLDTLWLLMNWAVVHT
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
EDIDRARREYDAK
HHHHHHHHHCCCC
>Mature Secondary Structure
MQTWSAGWTAGSRGPLEGDSQGGAAGRAREIVGRVGDKWTVAVVHALGNGPLRFTEIRRG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
VDGISQRMLTTTLRALERDGLVLRTVYPEIPPRVDYELTPVGRSLLDTLWLLMNWAVVHT
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
EDIDRARREYDAK
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]