| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158316573
GI number: 158316573
Start: 5740854
End: 5741846
Strand: Reverse
Name: yajO [H]
Synonym: Franean1_4809
Alternate gene names: 158316573
Gene position: 5741846-5740854 (Counterclockwise)
Preceding gene: 158316575
Following gene: 158316572
Centisome position: 63.93
GC content: 70.39
Gene sequence:
>993_bases GTGGAGTACGTCAAGCTGGGGTCGACCGGCCTGGAGGTCTCCCGGGTCTGCCTGGGCTGCATGAGCTACGGCACCCCGGG GGAGGGGAACTGGCCGTGGTCTCTTGACGAGGACGCGTCGCGGCCGTTCTTCCGGCGTGCGATCGAGGCGGGGATCAACT TCTTCGACACCGCGAACGTCTACTCGCTGGGCCGCAGCGAGGAGATCACCGGCCGGGCGCTGAAGGACTTCGCCCGCCGG GACGAGATCGTGCTGGCCACCAAGGTCCACTCCCGGATGCGGTCCGGCCCGAACGGGGCCGGCCTCTCCCGCAAGGTGAT CATGCACGAGATCGACGCGAGCCTGCGGCGCCTCGGCACGGACTACGTCGACCTCTTCCAGATCCACCGCTGGGACGAGA CGACGCCGATCGAGGAGACGCTCGAGGCGCTGCACGACGTCGTGAAGGCCGGCAAGGCCCGTTACATCGGCGCCTCGTCG ATGTACGCCTGGCAGTTCACCAAGGCGTTGTTCATCTCCGAGCGGCACGGCTGGACCCGTTTCGCGACGATGCAGAACCA CTACAACCTGCTCTACAGGGAGGAGGAGCGGGAGATGCTCCCGCTGTGCGCGGACCAGGGGATCGGCGTGATCCCGTGGA GCCCGCTGGCCCGCGGCCGCCTCACCCGCGACTGGGACGCCACCACGACCCGCGCCGAGTCCGACCCCTTCGCCCGCGCC TTCTACCAGGACGACGACCGGCTGATCGTCGAGGAGGTCGCCCGCATCGCCGACGAGCGCGGCGTGAGCCGGGCCCAGGT GGCGCTGGCCTGGGTGTCACGCAATCCCGTCGTCACCGCGCCGATCGTCGGCGCCACAAAGCCCGGGCACCTCGACGACG CGCTCGCCTCCCTGGAGCTGACCCTCACCGACGACGAGGCCGCCCGGCTGGAGGCCCCGTACCGCCCACGGCCCGTCGCC GGTATCCAGGTGCCGCAGCGGCGACGGCTCTGA
Upstream 100 bases:
>100_bases CACACCGGACGCGGCCGCGTCGTGGCAGAGTCGTGGGCTGGTGATCGCGCGGCGGCGCGGTGGCGGTGGGTGCGGCTGTG GTGGAGAGGAGCCTGATCTC
Downstream 100 bases:
>100_bases CGTCCGATCGAGGCCAGCGTGCTGGCCACCGGTGTCCTCCTCGACCTGTCCGTCGCCGAGGTCTGGCCGAAGGCGATCAC CCGCGAGCACGGCCGCATCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MEYVKLGSTGLEVSRVCLGCMSYGTPGEGNWPWSLDEDASRPFFRRAIEAGINFFDTANVYSLGRSEEITGRALKDFARR DEIVLATKVHSRMRSGPNGAGLSRKVIMHEIDASLRRLGTDYVDLFQIHRWDETTPIEETLEALHDVVKAGKARYIGASS MYAWQFTKALFISERHGWTRFATMQNHYNLLYREEEREMLPLCADQGIGVIPWSPLARGRLTRDWDATTTRAESDPFARA FYQDDDRLIVEEVARIADERGVSRAQVALAWVSRNPVVTAPIVGATKPGHLDDALASLELTLTDDEAARLEAPYRPRPVA GIQVPQRRRL
Sequences:
>Translated_330_residues MEYVKLGSTGLEVSRVCLGCMSYGTPGEGNWPWSLDEDASRPFFRRAIEAGINFFDTANVYSLGRSEEITGRALKDFARR DEIVLATKVHSRMRSGPNGAGLSRKVIMHEIDASLRRLGTDYVDLFQIHRWDETTPIEETLEALHDVVKAGKARYIGASS MYAWQFTKALFISERHGWTRFATMQNHYNLLYREEEREMLPLCADQGIGVIPWSPLARGRLTRDWDATTTRAESDPFARA FYQDDDRLIVEEVARIADERGVSRAQVALAWVSRNPVVTAPIVGATKPGHLDDALASLELTLTDDEAARLEAPYRPRPVA GIQVPQRRRL >Mature_330_residues MEYVKLGSTGLEVSRVCLGCMSYGTPGEGNWPWSLDEDASRPFFRRAIEAGINFFDTANVYSLGRSEEITGRALKDFARR DEIVLATKVHSRMRSGPNGAGLSRKVIMHEIDASLRRLGTDYVDLFQIHRWDETTPIEETLEALHDVVKAGKARYIGASS MYAWQFTKALFISERHGWTRFATMQNHYNLLYREEEREMLPLCADQGIGVIPWSPLARGRLTRDWDATTTRAESDPFARA FYQDDDRLIVEEVARIADERGVSRAQVALAWVSRNPVVTAPIVGATKPGHLDDALASLELTLTDDEAARLEAPYRPRPVA GIQVPQRRRL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=333, Percent_Identity=30.3303303303303, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI27436969, Length=316, Percent_Identity=31.0126582278481, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI27436962, Length=333, Percent_Identity=30.3303303303303, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI4504825, Length=314, Percent_Identity=30.8917197452229, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI27436966, Length=333, Percent_Identity=30.03003003003, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI27436971, Length=311, Percent_Identity=30.5466237942122, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI41152114, Length=208, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI223718702, Length=189, Percent_Identity=31.2169312169312, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI41327764, Length=176, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI223718708, Length=145, Percent_Identity=31.7241379310345, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=57.9754601226994, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=33.434650455927, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=30.5475504322767, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1788070, Length=331, Percent_Identity=33.2326283987915, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1788081, Length=305, Percent_Identity=32.7868852459016, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1787674, Length=313, Percent_Identity=25.2396166134185, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48994888, Length=325, Percent_Identity=25.8461538461538, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786400, Length=283, Percent_Identity=26.1484098939929, Blast_Score=62, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=338, Percent_Identity=38.7573964497041, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6323998, Length=318, Percent_Identity=30.188679245283, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=31.1643835616438, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319951, Length=317, Percent_Identity=29.6529968454259, Blast_Score=132, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6322615, Length=246, Percent_Identity=30.4878048780488, Blast_Score=123, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6321052, Length=158, Percent_Identity=31.6455696202532, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320079, Length=292, Percent_Identity=22.9452054794521, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646155, Length=315, Percent_Identity=33.015873015873, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24640980, Length=349, Percent_Identity=26.0744985673352, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI45549126, Length=349, Percent_Identity=26.0744985673352, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI24646159, Length=233, Percent_Identity=33.9055793991416, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37226; Mature: 37226
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYVKLGSTGLEVSRVCLGCMSYGTPGEGNWPWSLDEDASRPFFRRAIEAGINFFDTANV CCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCH YSLGRSEEITGRALKDFARRDEIVLATKVHSRMRSGPNGAGLSRKVIMHEIDASLRRLGT HHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC DYVDLFQIHRWDETTPIEETLEALHDVVKAGKARYIGASSMYAWQFTKALFISERHGWTR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHEECCCCCEE FATMQNHYNLLYREEEREMLPLCADQGIGVIPWSPLARGRLTRDWDATTTRAESDPFARA EEEHHHCCCEEEECCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH FYQDDDRLIVEEVARIADERGVSRAQVALAWVSRNPVVTAPIVGATKPGHLDDALASLEL HHCCCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCEEEECCCCCCCCCCHHHHHHEEEE TLTDDEAARLEAPYRPRPVAGIQVPQRRRL EEECCHHHHCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MEYVKLGSTGLEVSRVCLGCMSYGTPGEGNWPWSLDEDASRPFFRRAIEAGINFFDTANV CCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCH YSLGRSEEITGRALKDFARRDEIVLATKVHSRMRSGPNGAGLSRKVIMHEIDASLRRLGT HHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC DYVDLFQIHRWDETTPIEETLEALHDVVKAGKARYIGASSMYAWQFTKALFISERHGWTR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHEECCCCCEE FATMQNHYNLLYREEEREMLPLCADQGIGVIPWSPLARGRLTRDWDATTTRAESDPFARA EEEHHHCCCEEEECCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH FYQDDDRLIVEEVARIADERGVSRAQVALAWVSRNPVVTAPIVGATKPGHLDDALASLEL HHCCCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCEEEECCCCCCCCCCHHHHHHEEEE TLTDDEAARLEAPYRPRPVAGIQVPQRRRL EEECCHHHHCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]