| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316556
Identifier: 158316556
GI number: 158316556
Start: 5719095
End: 5720081
Strand: Reverse
Name: 158316556
Synonym: Franean1_4792
Alternate gene names: NA
Gene position: 5720081-5719095 (Counterclockwise)
Preceding gene: 158316557
Following gene: 158316554
Centisome position: 63.68
GC content: 70.11
Gene sequence:
>987_bases GTGCGTGTTCAGACAGATGTGCTGATCAGGGCGGCCACTGCCATCGATCATTCCGGGCCGGGCAGCCCGGACTGGCGCGC CCGGGTCGCCGGGGCGATCGAGGAGCTCGTAGCCGCCGGGCTCGTCGAATGCCCGAGGACGAAGGCTGGGTGGGACCGTC GTACCCTTCCCGAGCTTCCGCACTGGGTGCGGCGCAGCGCGCCGCCGGTGGCAGCGCCCCGGATGACGGCGAAACCGTGG CACCATCTCCTGCACTGGGTGCCCACCGTCGACTCCGAACGGCGCCTCAGCAGCGCCGAACGCGGCCTTCTCGACGCCGT GAACCGCTGGCTTCCCGCAGCAGACCAGGTCCCGGTCGTGCCGATGCGGGAACGCTCATGGGGACTCCTCGGCGACGACA AAGCGCTGGAGAAGCTGCGTTCCGGCCGGTTGTTCGTCCCGGGACGTCTCACCCTCGAGCTTCTGCGTTGTCGTTCGACC TGGCCGCCGGTGCAGCAGCGGGTGCTCGGTGCCGGAACCTGGCTGATAGTGGAGAACTGGTCGACCTTCGAATCGCTGTG CACGGCGGCCGAGGCCGATGGATTCGACGGGCGGATCATCTTCGGCTCCGGCAATCAGGTGGGCACACGCCTCGCCGCGC TCGCTGACAAGGGAGACACCCCGGCCTCGCCGGTCCTGTACTTCGGTGACATCGATGTGGGGGGTATCCGTGCCGCCCGG TTGGCCGTGACAACCGCACAGGGGGCGGGCTGGCCGGCGATCCGGCCGTGCCGGCCGCTGTACGAGCTCGCCCTCGCCTC CCCGCACCGGCTGAGGGTGCAACCCGCGTCGGCCGACACGGTCAGTTGGACGACGGCCTGGATCGCCGGCGAGCTGGGAC AGCAGGTCGCTATGTGCCTCACGCGCGGCGAAGCGGTGCGACAGGAGGCGGTCGGCCTGGAGATTCTCGGACCAGCTCCG TTCGCCGCGCTCGTCGCGGACGTCTGA
Upstream 100 bases:
>100_bases TGGTACGGCAGCGGACGACGAGCGAACCCTCGCCGTGAGCGGATCGGGCCTGAGCTCGCTGGCCGCCGCGATGGAGTCTG CCGTCCAGGATGCTCCGGGC
Downstream 100 bases:
>100_bases GTGGACGTCTGAGTGGACGTCTGAGTGGACGTCGTTCGTGGTACGCCAGCTACGCGGCCAGGACGTACGCCCGTTCGGCG GCGCCGGCGCGGCCGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRVQTDVLIRAATAIDHSGPGSPDWRARVAGAIEELVAAGLVECPRTKAGWDRRTLPELPHWVRRSAPPVAAPRMTAKPW HHLLHWVPTVDSERRLSSAERGLLDAVNRWLPAADQVPVVPMRERSWGLLGDDKALEKLRSGRLFVPGRLTLELLRCRST WPPVQQRVLGAGTWLIVENWSTFESLCTAAEADGFDGRIIFGSGNQVGTRLAALADKGDTPASPVLYFGDIDVGGIRAAR LAVTTAQGAGWPAIRPCRPLYELALASPHRLRVQPASADTVSWTTAWIAGELGQQVAMCLTRGEAVRQEAVGLEILGPAP FAALVADV
Sequences:
>Translated_328_residues MRVQTDVLIRAATAIDHSGPGSPDWRARVAGAIEELVAAGLVECPRTKAGWDRRTLPELPHWVRRSAPPVAAPRMTAKPW HHLLHWVPTVDSERRLSSAERGLLDAVNRWLPAADQVPVVPMRERSWGLLGDDKALEKLRSGRLFVPGRLTLELLRCRST WPPVQQRVLGAGTWLIVENWSTFESLCTAAEADGFDGRIIFGSGNQVGTRLAALADKGDTPASPVLYFGDIDVGGIRAAR LAVTTAQGAGWPAIRPCRPLYELALASPHRLRVQPASADTVSWTTAWIAGELGQQVAMCLTRGEAVRQEAVGLEILGPAP FAALVADV >Mature_328_residues MRVQTDVLIRAATAIDHSGPGSPDWRARVAGAIEELVAAGLVECPRTKAGWDRRTLPELPHWVRRSAPPVAAPRMTAKPW HHLLHWVPTVDSERRLSSAERGLLDAVNRWLPAADQVPVVPMRERSWGLLGDDKALEKLRSGRLFVPGRLTLELLRCRST WPPVQQRVLGAGTWLIVENWSTFESLCTAAEADGFDGRIIFGSGNQVGTRLAALADKGDTPASPVLYFGDIDVGGIRAAR LAVTTAQGAGWPAIRPCRPLYELALASPHRLRVQPASADTVSWTTAWIAGELGQQVAMCLTRGEAVRQEAVGLEILGPAP FAALVADV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35558; Mature: 35558
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVQTDVLIRAATAIDHSGPGSPDWRARVAGAIEELVAAGLVECPRTKAGWDRRTLPELP CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH HWVRRSAPPVAAPRMTAKPWHHLLHWVPTVDSERRLSSAERGLLDAVNRWLPAADQVPVV HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PMRERSWGLLGDDKALEKLRSGRLFVPGRLTLELLRCRSTWPPVQQRVLGAGTWLIVENW CCCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECC STFESLCTAAEADGFDGRIIFGSGNQVGTRLAALADKGDTPASPVLYFGDIDVGGIRAAR HHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEE LAVTTAQGAGWPAIRPCRPLYELALASPHRLRVQPASADTVSWTTAWIAGELGQQVAMCL EEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH TRGEAVRQEAVGLEILGPAPFAALVADV HHCHHHHHHHCCEEEECCCCHHHHHHCC >Mature Secondary Structure MRVQTDVLIRAATAIDHSGPGSPDWRARVAGAIEELVAAGLVECPRTKAGWDRRTLPELP CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH HWVRRSAPPVAAPRMTAKPWHHLLHWVPTVDSERRLSSAERGLLDAVNRWLPAADQVPVV HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PMRERSWGLLGDDKALEKLRSGRLFVPGRLTLELLRCRSTWPPVQQRVLGAGTWLIVENW CCCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECC STFESLCTAAEADGFDGRIIFGSGNQVGTRLAALADKGDTPASPVLYFGDIDVGGIRAAR HHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEE LAVTTAQGAGWPAIRPCRPLYELALASPHRLRVQPASADTVSWTTAWIAGELGQQVAMCL EEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH TRGEAVRQEAVGLEILGPAPFAALVADV HHCHHHHHHHCCEEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA