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The map label for this gene is ytfH [H]

Identifier: 158316534

GI number: 158316534

Start: 5695273

End: 5695716

Strand: Reverse

Name: ytfH [H]

Synonym: Franean1_4769

Alternate gene names: 158316534

Gene position: 5695716-5695273 (Counterclockwise)

Preceding gene: 158316536

Following gene: 158316533

Centisome position: 63.41

GC content: 68.69

Gene sequence:

>444_bases
ATGCCAACACTGACGGCAGCCCAGAAGCGGGCACAGGCGCAGGCAGACTACGACGCGTTCCTGGCACGCTGCCCCAGCCG
CCAGCTACTCGACCGGATCTCCGACAAGTGGGTGACGCTGGTCCTGGCGGCTCTCGGCAGCGACGGCCCGCACGCCCCCG
GCAGCAACCATGTCGGCGAGCCGCGAGCGATGCGCTACTCGGAGTTGGCCCGCCGGCTGGCCGGGGTCAGCCAGAAGATG
CTCACCCAGACACTGCGTTCCCTCGAGCGCGACGGCCTGGTCACCCGCACCGTGACGGCGACCGTGCCGGTCACCGTCAC
CTACGAGCTGACCGACCTGGGTCTCTCGCTCCACCACATGATGCACGGCATCAAGGATTGGGCCGAGGCACACATGGACG
AGGTGCTCGCCAACCGCGAGGAGTACGACACCCGCGTCGCCTGA

Upstream 100 bases:

>100_bases
GTTCGACGGCCATCCCACATCACTATTGAGGGGTAACTCTCCACGAGGAAGTACGCACCTCACAGTGCGTAGGGCACCGC
CCGGTAGGAAGGAGCAGTCG

Downstream 100 bases:

>100_bases
ACACCGACCATCAGCACAGCGGAGGCCGTCGTATCAACCCCCCTGGATCCTCACCAGACCATCGGCGTCTGACAGGCCGG
TCTTGCCGGCCCCCCGGCCC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPTLTAAQKRAQAQADYDAFLARCPSRQLLDRISDKWVTLVLAALGSDGPHAPGSNHVGEPRAMRYSELARRLAGVSQKM
LTQTLRSLERDGLVTRTVTATVPVTVTYELTDLGLSLHHMMHGIKDWAEAHMDEVLANREEYDTRVA

Sequences:

>Translated_147_residues
MPTLTAAQKRAQAQADYDAFLARCPSRQLLDRISDKWVTLVLAALGSDGPHAPGSNHVGEPRAMRYSELARRLAGVSQKM
LTQTLRSLERDGLVTRTVTATVPVTVTYELTDLGLSLHHMMHGIKDWAEAHMDEVLANREEYDTRVA
>Mature_146_residues
PTLTAAQKRAQAQADYDAFLARCPSRQLLDRISDKWVTLVLAALGSDGPHAPGSNHVGEPRAMRYSELARRLAGVSQKML
TQTLRSLERDGLVTRTVTATVPVTVTYELTDLGLSLHHMMHGIKDWAEAHMDEVLANREEYDTRVA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=131, Percent_Identity=36.6412213740458, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16311; Mature: 16180

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLTAAQKRAQAQADYDAFLARCPSRQLLDRISDKWVTLVLAALGSDGPHAPGSNHVGE
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PRAMRYSELARRLAGVSQKMLTQTLRSLERDGLVTRTVTATVPVTVTYELTDLGLSLHHM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEEEEEHHHHHHHHHHH
MHGIKDWAEAHMDEVLANREEYDTRVA
HHHHHHHHHHHHHHHHHCHHHHHCCCC
>Mature Secondary Structure 
PTLTAAQKRAQAQADYDAFLARCPSRQLLDRISDKWVTLVLAALGSDGPHAPGSNHVGE
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PRAMRYSELARRLAGVSQKMLTQTLRSLERDGLVTRTVTATVPVTVTYELTDLGLSLHHM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEEEEEHHHHHHHHHHH
MHGIKDWAEAHMDEVLANREEYDTRVA
HHHHHHHHHHHHHHHHHCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]