| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is lip2 [H]
Identifier: 158316516
GI number: 158316516
Start: 5672779
End: 5673777
Strand: Reverse
Name: lip2 [H]
Synonym: Franean1_4751
Alternate gene names: 158316516
Gene position: 5673777-5672779 (Counterclockwise)
Preceding gene: 158316517
Following gene: 158316515
Centisome position: 63.17
GC content: 75.68
Gene sequence:
>999_bases ATGGCCGCCATCGACGTGCACAAACGGGTCGAGCCCGGGACCGTGGCGCTGCTCGATCGGCTGGCGCGCTGGGACCTGAC GAGCATCGCGACGATCCGGCGCTCGTACGCGGCGGTCGGCCCGCCGTCCGCCCCCGAGGATCCGCGGGTCCGGCGTCGCG ACCAGGTCATCCCGGGCACGGACGGCCGTCCCGACGTCCGGGTGCGCTGGTACCGCCCCGCCGACGCCCCCGCCGGGGCG GCGCTGCCCTTCCTCCTCTGGCTGCACGGCGGCGCCTACATCATGGGGAACCTGGACGAGAACGACGACCGCCTCGACCG GATGGTCATCGAGCTCGGCTGCGCCGTCGCCTCGGTCGACTGGCGGCTGGCCCCGGAGCACCCCTACCCGGCGGGCCTGG AGGACGCGGAGACGGTCTGGCGCCGGGTCAGCGCGAACCCGGCCGACTTCGGGGTCGACCCGGCCCGACTGGTCCTGGGC GGGGCGAGCGCGGGTGCCGGCCTGGCCGCCGGACTGTGCCTGCGGCTGCGGGACCTCGGCGTCCCCCAGCCGGTGCTGCA GCTGCTGATCTACCCGATGCTCGACGACCGTGAGCTGACACCCTCGATCCGCGCGATCGAGGACCCGGGGCACTGGGGCC TGTGGCATCTGCGGGCCAACCGGATGTGCTGGGCGGCCTATCTCGGGTCGCTCGACGGCGGCGAGGTCCCGCCCACCGCG GCGCCGGCGCGGGCGGAGGACCTCACCGGGCTCGCGCCGGCCTTCCTCGGGATCGGCGACGTCGACGGGTTCGTGGACGA GAACGTCGCCTACGCGGCACGCCTGTCGGCCGCGGGCGTGCCGATCGAGCTGCACGTGTACCCCGGGGTCATCCACGGCG GGTTCGGCGCACCGCCGCGCACCCCGCGCACCGCGCAGTTCCTGCGGGACGTCTACGCGGCGCTGGCCGCCGCGTTCGTG CCGGCGGACGGATCCCAGGAAGCCGGCGAGGGGCCCTGA
Upstream 100 bases:
>100_bases TCCGGATGGCCCGCTTCTACACCCGGTTCACGGCGCTGCTGATCAAGGCGATCGAGGTCGGTGTCGAGCCGATGAACCCG GACCGGGCCGACGGCAACTG
Downstream 100 bases:
>100_bases TGGTCGGGGAGAACCTGGCGGACGTGGCGAACCTGGCGGACGTGGCTGGCCTGGCGGAGGTGGAGAGCAGGCTCCGGCGG CTGGAGGCACGGCTGCGGTC
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MAAIDVHKRVEPGTVALLDRLARWDLTSIATIRRSYAAVGPPSAPEDPRVRRRDQVIPGTDGRPDVRVRWYRPADAPAGA ALPFLLWLHGGAYIMGNLDENDDRLDRMVIELGCAVASVDWRLAPEHPYPAGLEDAETVWRRVSANPADFGVDPARLVLG GASAGAGLAAGLCLRLRDLGVPQPVLQLLIYPMLDDRELTPSIRAIEDPGHWGLWHLRANRMCWAAYLGSLDGGEVPPTA APARAEDLTGLAPAFLGIGDVDGFVDENVAYAARLSAAGVPIELHVYPGVIHGGFGAPPRTPRTAQFLRDVYAALAAAFV PADGSQEAGEGP
Sequences:
>Translated_332_residues MAAIDVHKRVEPGTVALLDRLARWDLTSIATIRRSYAAVGPPSAPEDPRVRRRDQVIPGTDGRPDVRVRWYRPADAPAGA ALPFLLWLHGGAYIMGNLDENDDRLDRMVIELGCAVASVDWRLAPEHPYPAGLEDAETVWRRVSANPADFGVDPARLVLG GASAGAGLAAGLCLRLRDLGVPQPVLQLLIYPMLDDRELTPSIRAIEDPGHWGLWHLRANRMCWAAYLGSLDGGEVPPTA APARAEDLTGLAPAFLGIGDVDGFVDENVAYAARLSAAGVPIELHVYPGVIHGGFGAPPRTPRTAQFLRDVYAALAAAFV PADGSQEAGEGP >Mature_331_residues AAIDVHKRVEPGTVALLDRLARWDLTSIATIRRSYAAVGPPSAPEDPRVRRRDQVIPGTDGRPDVRVRWYRPADAPAGAA LPFLLWLHGGAYIMGNLDENDDRLDRMVIELGCAVASVDWRLAPEHPYPAGLEDAETVWRRVSANPADFGVDPARLVLGG ASAGAGLAAGLCLRLRDLGVPQPVLQLLIYPMLDDRELTPSIRAIEDPGHWGLWHLRANRMCWAAYLGSLDGGEVPPTAA PARAEDLTGLAPAFLGIGDVDGFVDENVAYAARLSAAGVPIELHVYPGVIHGGFGAPPRTPRTAQFLRDVYAALAAAFVP ADGSQEAGEGP
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI157041239, Length=161, Percent_Identity=30.4347826086957, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1786682, Length=266, Percent_Identity=27.0676691729323, Blast_Score=82, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17567059, Length=273, Percent_Identity=27.8388278388278, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540028, Length=151, Percent_Identity=30.4635761589404, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI72001146, Length=170, Percent_Identity=31.1764705882353, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71996133, Length=158, Percent_Identity=29.1139240506329, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 35468; Mature: 35336
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIDVHKRVEPGTVALLDRLARWDLTSIATIRRSYAAVGPPSAPEDPRVRRRDQVIPGT CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC DGRPDVRVRWYRPADAPAGAALPFLLWLHGGAYIMGNLDENDDRLDRMVIELGCAVASVD CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHEECC WRLAPEHPYPAGLEDAETVWRRVSANPADFGVDPARLVLGGASAGAGLAAGLCLRLRDLG CEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHCC VPQPVLQLLIYPMLDDRELTPSIRAIEDPGHWGLWHLRANRMCWAAYLGSLDGGEVPPTA CCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEHHHHHCCCCCCCCCCCC APARAEDLTGLAPAFLGIGDVDGFVDENVAYAARLSAAGVPIELHVYPGVIHGGFGAPPR CCCCHHHHCCHHHHHHCCCCCCCHHCCCHHHHHHHHHCCCCEEEEEECCEEECCCCCCCC TPRTAQFLRDVYAALAAAFVPADGSQEAGEGP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AAIDVHKRVEPGTVALLDRLARWDLTSIATIRRSYAAVGPPSAPEDPRVRRRDQVIPGT CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC DGRPDVRVRWYRPADAPAGAALPFLLWLHGGAYIMGNLDENDDRLDRMVIELGCAVASVD CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHEECC WRLAPEHPYPAGLEDAETVWRRVSANPADFGVDPARLVLGGASAGAGLAAGLCLRLRDLG CEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHCC VPQPVLQLLIYPMLDDRELTPSIRAIEDPGHWGLWHLRANRMCWAAYLGSLDGGEVPPTA CCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEHHHHHCCCCCCCCCCCC APARAEDLTGLAPAFLGIGDVDGFVDENVAYAARLSAAGVPIELHVYPGVIHGGFGAPPR CCCCHHHHCCHHHHHHCCCCCCCHHCCCHHHHHHHHHCCCCEEEEEECCEEECCCCCCCC TPRTAQFLRDVYAALAAAFVPADGSQEAGEGP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]