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The map label for this gene is rhaB [H]

Identifier: 158316436

GI number: 158316436

Start: 5578147

End: 5579541

Strand: Reverse

Name: rhaB [H]

Synonym: Franean1_4671

Alternate gene names: 158316436

Gene position: 5579541-5578147 (Counterclockwise)

Preceding gene: 158316437

Following gene: 158316435

Centisome position: 62.12

GC content: 74.55

Gene sequence:

>1395_bases
ATGACCGCCAGGGTGTTCGCCGCCGTCGACATCGGGGCGTCCGGCGGGCGGGTGATGGCCGGGCTGGTCGAGGGTGTGTC
AGTGTCCCTGCGGCCGGTGCACCGGTTCGCCAACCCGCTCGTCGAGACCGCGGGATCGCTGCGCTGGGACTTCGACCACC
TGCACGGCGAGATGCTCCGCGGGCTGCGCAGATTGGCCCGGGAGTGGCCCGCACTGGAGTCGATCGGCATCGACACCTGG
GCGGTCGACTTCGGCCTGCTCGACGGCGCCGGTGAGCTCCTCGCGCCGCCCGTCGCCTACCGGGACGGCCACGCCGCGGA
GTTCGTCGACGACGTGCACGCCACGGTGAGACCGGAGGAGCTGTTCGCCGTCAACGGGCTGCAGTTCCTGCCGTTCACGA
CGCTGTACCAGCTTGCCGCGCAGCGGCGCGGCTCCCTGTGGGACCGGGCCGCGCACGTCGTCCTGGTGCCCGACCTGCTG
GCCTACCGGCTGACCGGGCGACTGCGCACCGAGCTCACGAACGCCTCGACGACCGGCCTGCTCGACGTCCGGACGCGCCA
GTGGTCCGAGGAGCTGCTGCGGCGGCTCGACATCCCGCGCCGGCTCCTGCCGGACCTCGAGGCGCCGGGTACCGTCCGCG
GCGTCACGCACGCGCTCGGCCCGCCGGTCCCGGTGACGACGGTGGGCTCGCACGACACCGCCTCCGCCGTCGTCGGGGTC
CCCGCGACGACCGACAGCTTCGGCTACGTCTCGTGCGGCACCTGGTCGCTGGTGGGCCTGGAGCTGCCGGCGCCGGTACT
CACCCCGGACGCCCGCGCGGCGAACTTCACCAACGAGATCGGCGTCGACGGCCGGGTACGGTTCCTGCGCAACGTCGGCG
GGCTGTGGCTGCTGCAGGAATGTCTGCGGGAGTGGAACAACCCCGACCTCGATGACCTCCTCGCCGCCGCCGCGGCGCTG
CCACCCGGCGGCCCGGTGATCGACGTCGACGACCCCGCACTCATCGCGCCGGGAAACATGCCGGCCCGGATCGCGGCGGC
CGTGCGTGACGGCGACGGCGACGGCCGGGTGCCCCGGACGCCGGCCGCGCTCGCGCGCTGCGTCGTCGACTCCCTCGCCC
TCGCCTACGCGCAGACCCTGCGGCGGGCCGCGGACCTGACCGGGCGGCAGGTCGAGGTCATCCATCTCGTCGGTGGCGGC
TCCCGCGGCGAGCTACTGTGCCGACTCACCGCGACCGCGGCGGGGGTGCCGGTCGTCGCCGGGCCGGTCGAGGCGACCGC
GCTCGGCAACGTCCTCGTCCAGGCTCGGGCCCACGGCGCCGCGCCGGCCACCCTGGAAGACCTGCGCGCGCAGCTCGCGC
GTGCATCGACCCTCCGGAGGTACGAGCCGTCATGA

Upstream 100 bases:

>100_bases
GCTCGTCCCCGTCGACGCCGGCGTCGCGGCCGCCTTCCTGCGCTGACGGCGACGCTGTGCTGACTGTGGCGTCCGCGCCG
ACGATGACGTCGGGCTGCCC

Downstream 100 bases:

>100_bases
GGCCCCTGGCGACACTGCGTTCCGTCATGCGGTTCGGCCCGGTCGAGACCAACCGGACCGAGCGGCGGCTGGCCCGGGCG
GCCTCGGTGCACGATCTGCG

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MTARVFAAVDIGASGGRVMAGLVEGVSVSLRPVHRFANPLVETAGSLRWDFDHLHGEMLRGLRRLAREWPALESIGIDTW
AVDFGLLDGAGELLAPPVAYRDGHAAEFVDDVHATVRPEELFAVNGLQFLPFTTLYQLAAQRRGSLWDRAAHVVLVPDLL
AYRLTGRLRTELTNASTTGLLDVRTRQWSEELLRRLDIPRRLLPDLEAPGTVRGVTHALGPPVPVTTVGSHDTASAVVGV
PATTDSFGYVSCGTWSLVGLELPAPVLTPDARAANFTNEIGVDGRVRFLRNVGGLWLLQECLREWNNPDLDDLLAAAAAL
PPGGPVIDVDDPALIAPGNMPARIAAAVRDGDGDGRVPRTPAALARCVVDSLALAYAQTLRRAADLTGRQVEVIHLVGGG
SRGELLCRLTATAAGVPVVAGPVEATALGNVLVQARAHGAAPATLEDLRAQLARASTLRRYEPS

Sequences:

>Translated_464_residues
MTARVFAAVDIGASGGRVMAGLVEGVSVSLRPVHRFANPLVETAGSLRWDFDHLHGEMLRGLRRLAREWPALESIGIDTW
AVDFGLLDGAGELLAPPVAYRDGHAAEFVDDVHATVRPEELFAVNGLQFLPFTTLYQLAAQRRGSLWDRAAHVVLVPDLL
AYRLTGRLRTELTNASTTGLLDVRTRQWSEELLRRLDIPRRLLPDLEAPGTVRGVTHALGPPVPVTTVGSHDTASAVVGV
PATTDSFGYVSCGTWSLVGLELPAPVLTPDARAANFTNEIGVDGRVRFLRNVGGLWLLQECLREWNNPDLDDLLAAAAAL
PPGGPVIDVDDPALIAPGNMPARIAAAVRDGDGDGRVPRTPAALARCVVDSLALAYAQTLRRAADLTGRQVEVIHLVGGG
SRGELLCRLTATAAGVPVVAGPVEATALGNVLVQARAHGAAPATLEDLRAQLARASTLRRYEPS
>Mature_463_residues
TARVFAAVDIGASGGRVMAGLVEGVSVSLRPVHRFANPLVETAGSLRWDFDHLHGEMLRGLRRLAREWPALESIGIDTWA
VDFGLLDGAGELLAPPVAYRDGHAAEFVDDVHATVRPEELFAVNGLQFLPFTTLYQLAAQRRGSLWDRAAHVVLVPDLLA
YRLTGRLRTELTNASTTGLLDVRTRQWSEELLRRLDIPRRLLPDLEAPGTVRGVTHALGPPVPVTTVGSHDTASAVVGVP
ATTDSFGYVSCGTWSLVGLELPAPVLTPDARAANFTNEIGVDGRVRFLRNVGGLWLLQECLREWNNPDLDDLLAAAAALP
PGGPVIDVDDPALIAPGNMPARIAAAVRDGDGDGRVPRTPAALARCVVDSLALAYAQTLRRAADLTGRQVEVIHLVGGGS
RGELLCRLTATAAGVPVVAGPVEATALGNVLVQARAHGAAPATLEDLRAQLARASTLRRYEPS

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=471, Percent_Identity=40.7643312101911, Blast_Score=328, Evalue=4e-91,
Organism=Escherichia coli, GI1789168, Length=468, Percent_Identity=26.7094017094017, Blast_Score=115, Evalue=9e-27,
Organism=Escherichia coli, GI1787789, Length=351, Percent_Identity=27.0655270655271, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 49336; Mature: 49205

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARVFAAVDIGASGGRVMAGLVEGVSVSLRPVHRFANPLVETAGSLRWDFDHLHGEMLR
CCCEEEEEEEECCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCEECHHHHHHHHHH
GLRRLAREWPALESIGIDTWAVDFGLLDGAGELLAPPVAYRDGHAAEFVDDVHATVRPEE
HHHHHHHHCCCHHHCCCCCEEEEHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCHHH
LFAVNGLQFLPFTTLYQLAAQRRGSLWDRAAHVVLVPDLLAYRLTGRLRTELTNASTTGL
HHEECCCCHHHHHHHHHHHHHHCCCHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCCCE
LDVRTRQWSEELLRRLDIPRRLLPDLEAPGTVRGVTHALGPPVPVTTVGSHDTASAVVGV
EEHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEEEC
PATTDSFGYVSCGTWSLVGLELPAPVLTPDARAANFTNEIGVDGRVRFLRNVGGLWLLQE
CCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCHHHHHHH
CLREWNNPDLDDLLAAAAALPPGGPVIDVDDPALIAPGNMPARIAAAVRDGDGDGRVPRT
HHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCEECCCCCCHHEEEEEECCCCCCCCCCC
PAALARCVVDSLALAYAQTLRRAADLTGRQVEVIHLVGGGSRGELLCRLTATAAGVPVVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEHHHCCCCEEE
GPVEATALGNVLVQARAHGAAPATLEDLRAQLARASTLRRYEPS
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TARVFAAVDIGASGGRVMAGLVEGVSVSLRPVHRFANPLVETAGSLRWDFDHLHGEMLR
CCEEEEEEEECCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCEECHHHHHHHHHH
GLRRLAREWPALESIGIDTWAVDFGLLDGAGELLAPPVAYRDGHAAEFVDDVHATVRPEE
HHHHHHHHCCCHHHCCCCCEEEEHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCHHH
LFAVNGLQFLPFTTLYQLAAQRRGSLWDRAAHVVLVPDLLAYRLTGRLRTELTNASTTGL
HHEECCCCHHHHHHHHHHHHHHCCCHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCCCE
LDVRTRQWSEELLRRLDIPRRLLPDLEAPGTVRGVTHALGPPVPVTTVGSHDTASAVVGV
EEHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEEEC
PATTDSFGYVSCGTWSLVGLELPAPVLTPDARAANFTNEIGVDGRVRFLRNVGGLWLLQE
CCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCHHHHHHH
CLREWNNPDLDDLLAAAAALPPGGPVIDVDDPALIAPGNMPARIAAAVRDGDGDGRVPRT
HHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCEECCCCCCHHEEEEEECCCCCCCCCCC
PAALARCVVDSLALAYAQTLRRAADLTGRQVEVIHLVGGGSRGELLCRLTATAAGVPVVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEHHHCCCCEEE
GPVEATALGNVLVQARAHGAAPATLEDLRAQLARASTLRRYEPS
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]