| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316389
Identifier: 158316389
GI number: 158316389
Start: 5510221
End: 5510922
Strand: Reverse
Name: 158316389
Synonym: Franean1_4620
Alternate gene names: NA
Gene position: 5510922-5510221 (Counterclockwise)
Preceding gene: 158316392
Following gene: 158316386
Centisome position: 61.35
GC content: 72.22
Gene sequence:
>702_bases GTGGCGATGAGGGTCGTGTTCGTGCACGGGGCGTGCGTGCAGGACGGGTCATGGTGGTGGCACCGCGCGGCGCGGCTGCT GCAGGAACGGGGGGTGGCCAGCATGTCCCCGACCCTCCCGAGCTGCGGCGAGACGGGCGTGCCACCAGGGGCCGGCGGGC CGGGCCTGGCCGAAGACGTGGCCGCCGTGCGGCAGGTGCTGCAAGACGGCGACGAACCCACCATCGTGGTCGCCCACAGC TACGGCGGCATCGTGACCGCCGAGGCGGCCGCGGGGGTCGACTCGGTGCGCCATCTGCTGCTGATCTCCAGCTATCTGCC CGAGGTCGGGCAGAGCCTGTCGGAGTTCGGCGACGACACCCCCGCCCCGTTCCTGGACGTCGACCCCGACACCGGGACGT TCGGGGTCCGCCCCGAGCTACTCGTGGACACGTTCCTGCAGGACTGCGACGCTGACATCCAGACACAGGCCCTGGCCCAC CTCACGCGGCAGAGCGTCCAGGTGACCGGGCAGCCGGTCGGGGCAGCCGCCTGGCAGCAGGTGCCCTCCACCTACCTCGT ATGCGCCCAGGACAAGGGCACCCCCGCCCGGCTACAACGCGAGTTCGCCTGCAGAGCCGGCCGTGTCGTCGAGCTCGACG CCGGCCACCACCCCTTCCTGTCCCAGCCCACCGCAGTCGGCGACCTGCTGCTGAGCCTGTAG
Upstream 100 bases:
>100_bases CCGGATCTCGGGCTGTCGCGGCCGTCCCATCACCGCAGCTTTTCGCGTAACAACTGCTACGTCTACCGTCGGTCGGGACA CAGCCAGGACGGACGCGGAG
Downstream 100 bases:
>100_bases GGCACCCGCTGATGAGCTTGCCCTCGCGACGAGGACCAGGGAGCCGAGGTGAGCGACAGTCGGGGTGTCGCAGGACGAGG AGCTCGACGTCCTTTGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAMRVVFVHGACVQDGSWWWHRAARLLQERGVASMSPTLPSCGETGVPPGAGGPGLAEDVAAVRQVLQDGDEPTIVVAHS YGGIVTAEAAAGVDSVRHLLLISSYLPEVGQSLSEFGDDTPAPFLDVDPDTGTFGVRPELLVDTFLQDCDADIQTQALAH LTRQSVQVTGQPVGAAAWQQVPSTYLVCAQDKGTPARLQREFACRAGRVVELDAGHHPFLSQPTAVGDLLLSL
Sequences:
>Translated_233_residues MAMRVVFVHGACVQDGSWWWHRAARLLQERGVASMSPTLPSCGETGVPPGAGGPGLAEDVAAVRQVLQDGDEPTIVVAHS YGGIVTAEAAAGVDSVRHLLLISSYLPEVGQSLSEFGDDTPAPFLDVDPDTGTFGVRPELLVDTFLQDCDADIQTQALAH LTRQSVQVTGQPVGAAAWQQVPSTYLVCAQDKGTPARLQREFACRAGRVVELDAGHHPFLSQPTAVGDLLLSL >Mature_232_residues AMRVVFVHGACVQDGSWWWHRAARLLQERGVASMSPTLPSCGETGVPPGAGGPGLAEDVAAVRQVLQDGDEPTIVVAHSY GGIVTAEAAAGVDSVRHLLLISSYLPEVGQSLSEFGDDTPAPFLDVDPDTGTFGVRPELLVDTFLQDCDADIQTQALAHL TRQSVQVTGQPVGAAAWQQVPSTYLVCAQDKGTPARLQREFACRAGRVVELDAGHHPFLSQPTAVGDLLLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24618; Mature: 24487
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRVVFVHGACVQDGSWWWHRAARLLQERGVASMSPTLPSCGETGVPPGAGGPGLAEDV CCEEEEEEECEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AAVRQVLQDGDEPTIVVAHSYGGIVTAEAAAGVDSVRHLLLISSYLPEVGQSLSEFGDDT HHHHHHHHCCCCCEEEEEECCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAPFLDVDPDTGTFGVRPELLVDTFLQDCDADIQTQALAHLTRQSVQVTGQPVGAAAWQQ CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH VPSTYLVCAQDKGTPARLQREFACRAGRVVELDAGHHPFLSQPTAVGDLLLSL CCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AMRVVFVHGACVQDGSWWWHRAARLLQERGVASMSPTLPSCGETGVPPGAGGPGLAEDV CEEEEEEECEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AAVRQVLQDGDEPTIVVAHSYGGIVTAEAAAGVDSVRHLLLISSYLPEVGQSLSEFGDDT HHHHHHHHCCCCCEEEEEECCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAPFLDVDPDTGTFGVRPELLVDTFLQDCDADIQTQALAHLTRQSVQVTGQPVGAAAWQQ CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH VPSTYLVCAQDKGTPARLQREFACRAGRVVELDAGHHPFLSQPTAVGDLLLSL CCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA