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The map label for this gene is ucpA [C]

Identifier: 158316361

GI number: 158316361

Start: 5473599

End: 5474459

Strand: Reverse

Name: ucpA [C]

Synonym: Franean1_4592

Alternate gene names: 158316361

Gene position: 5474459-5473599 (Counterclockwise)

Preceding gene: 158316369

Following gene: 158316359

Centisome position: 60.95

GC content: 72.59

Gene sequence:

>861_bases
GTGGGACGCATGGACGGCAAGGTCGTCTTCATCACCGGTGCGGCGCGTGGCCAGGGGCGGGCGCACGCCGTCCGGGTAGC
GGCGGAGGGAGGCGACGTCGTGGCCGTCGACCTGTGCGCCGACATCGCCTCCACGCCCTACCCGATGGCGACCCGGGACG
ACCTGGACGAGACGGCCCGCCTGGTCAAGGAGCGCGGCGGCCGCGTCGTCGCGCAGGTCGCCGACGTCCGCGACCGGGCC
GCGCTGGCCGCCGCCGTCGCCGAGGGCATCGCCCAGTTCGGCCGGTTGGACGGCGTGGTGGCCCAGGCCGGTATCTGCCC
GCTCGGTACGACGGCGCCGCAGGCCTTCGTCGACGCGGTCAGCGTCGACTTCGGTGGCGTCTTCAACGCCGTCGACGTCG
CCCTGCCCCACCTGCAGCCCGGGGCCTCGATCGTCGCGACGGGAAGCCTGGCCGCGTTGATCCCCGGCACATTGGACAAC
GCGGCCAAGGGGTCCGGCGGCCTGGGCTACGCCTGGGCCAAGCGGGCGGTGGCGTCGCTGGTCCACGACCTCGCCGTCGT
CCTGGCTGGTCAGAGCATCCGGGTGAACGCCGTCCACCCGACCAACGTCAACACCGACATGCTGAACAACGACGTCATGT
ACCGGGCGTTCCGCCCGGACCTGGCCGAGCCCACCCTCGAGGACGTGCTGCCGTCGTTCCCGGCCATGACCGCGACAGGC
GACCCGTACGTCGAGCCCGAGGACATCGCCGACGCGGTCCTCTTCCTGCTCTCCGACGAGTCCCGCTTCATCACCGGCAC
CCAGCTCCGCGTCGACGCGGGAGGTTACGTCAGGCTGCGGCCGCAGGTGCCCGCCTTCTGA

Upstream 100 bases:

>100_bases
ATGGCGGCAGTCGCAGGCGAAGGCAAGCAGCTCGCGTGGGGTCGGGCCGAGGTCAGCGAGGGGCGCGGCGTCCTCGGGCA
CAAGGGACAGGAGCACATCC

Downstream 100 bases:

>100_bases
CGGCCCGCCCGACGCGTCACTCCTCGGAAGGTGCGGCCGTCCCGTCGAAAGGCGGGTCGGCCCGGCCGGGGGGGACGTAG
GTGAGGAAGCCGGTCTCGCC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGRMDGKVVFITGAARGQGRAHAVRVAAEGGDVVAVDLCADIASTPYPMATRDDLDETARLVKERGGRVVAQVADVRDRA
ALAAAVAEGIAQFGRLDGVVAQAGICPLGTTAPQAFVDAVSVDFGGVFNAVDVALPHLQPGASIVATGSLAALIPGTLDN
AAKGSGGLGYAWAKRAVASLVHDLAVVLAGQSIRVNAVHPTNVNTDMLNNDVMYRAFRPDLAEPTLEDVLPSFPAMTATG
DPYVEPEDIADAVLFLLSDESRFITGTQLRVDAGGYVRLRPQVPAF

Sequences:

>Translated_286_residues
MGRMDGKVVFITGAARGQGRAHAVRVAAEGGDVVAVDLCADIASTPYPMATRDDLDETARLVKERGGRVVAQVADVRDRA
ALAAAVAEGIAQFGRLDGVVAQAGICPLGTTAPQAFVDAVSVDFGGVFNAVDVALPHLQPGASIVATGSLAALIPGTLDN
AAKGSGGLGYAWAKRAVASLVHDLAVVLAGQSIRVNAVHPTNVNTDMLNNDVMYRAFRPDLAEPTLEDVLPSFPAMTATG
DPYVEPEDIADAVLFLLSDESRFITGTQLRVDAGGYVRLRPQVPAF
>Mature_285_residues
GRMDGKVVFITGAARGQGRAHAVRVAAEGGDVVAVDLCADIASTPYPMATRDDLDETARLVKERGGRVVAQVADVRDRAA
LAAAVAEGIAQFGRLDGVVAQAGICPLGTTAPQAFVDAVSVDFGGVFNAVDVALPHLQPGASIVATGSLAALIPGTLDNA
AKGSGGLGYAWAKRAVASLVHDLAVVLAGQSIRVNAVHPTNVNTDMLNNDVMYRAFRPDLAEPTLEDVLPSFPAMTATGD
PYVEPEDIADAVLFLLSDESRFITGTQLRVDAGGYVRLRPQVPAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254986, Length=214, Percent_Identity=30.8411214953271, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=277, Percent_Identity=30.6859205776173, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786812, Length=279, Percent_Identity=29.3906810035842, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787335, Length=279, Percent_Identity=29.3906810035842, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787905, Length=282, Percent_Identity=28.3687943262411, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789378, Length=268, Percent_Identity=25.7462686567164, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367175, Length=272, Percent_Identity=27.5735294117647, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=278, Percent_Identity=26.2589928057554, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=286, Percent_Identity=27.972027972028, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=293, Percent_Identity=25.2559726962457, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=288, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24643142, Length=276, Percent_Identity=29.3478260869565, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI28571526, Length=283, Percent_Identity=28.6219081272085, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357041, Length=283, Percent_Identity=27.9151943462898, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI23397609, Length=287, Percent_Identity=29.9651567944251, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24644339, Length=279, Percent_Identity=26.5232974910394, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21357673, Length=281, Percent_Identity=26.6903914590747, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 29644; Mature: 29513

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMDGKVVFITGAARGQGRAHAVRVAAEGGDVVAVDLCADIASTPYPMATRDDLDETAR
CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCHHHHHH
LVKERGGRVVAQVADVRDRAALAAAVAEGIAQFGRLDGVVAQAGICPLGTTAPQAFVDAV
HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHH
SVDFGGVFNAVDVALPHLQPGASIVATGSLAALIPGTLDNAAKGSGGLGYAWAKRAVASL
HCCCCCHHHHHHHHCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH
VHDLAVVLAGQSIRVNAVHPTNVNTDMLNNDVMYRAFRPDLAEPTLEDVLPSFPAMTATG
HHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCC
DPYVEPEDIADAVLFLLSDESRFITGTQLRVDAGGYVRLRPQVPAF
CCCCCHHHHHHHHHHHCCCCCCEEECEEEEECCCCEEEECCCCCCC
>Mature Secondary Structure 
GRMDGKVVFITGAARGQGRAHAVRVAAEGGDVVAVDLCADIASTPYPMATRDDLDETAR
CCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCHHHHHH
LVKERGGRVVAQVADVRDRAALAAAVAEGIAQFGRLDGVVAQAGICPLGTTAPQAFVDAV
HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHH
SVDFGGVFNAVDVALPHLQPGASIVATGSLAALIPGTLDNAAKGSGGLGYAWAKRAVASL
HCCCCCHHHHHHHHCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH
VHDLAVVLAGQSIRVNAVHPTNVNTDMLNNDVMYRAFRPDLAEPTLEDVLPSFPAMTATG
HHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCC
DPYVEPEDIADAVLFLLSDESRFITGTQLRVDAGGYVRLRPQVPAF
CCCCCHHHHHHHHHHHCCCCCCEEECEEEEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA