| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158316313
GI number: 158316313
Start: 5416764
End: 5417762
Strand: Reverse
Name: yajO [H]
Synonym: Franean1_4540
Alternate gene names: 158316313
Gene position: 5417762-5416764 (Counterclockwise)
Preceding gene: 158316314
Following gene: 158316312
Centisome position: 60.32
GC content: 68.47
Gene sequence:
>999_bases ATGGAATACGCCAACCTCGGAACCTCCGGGCTGAAGGTCAGCCGTATCGCGCTCGGCTGCATGAGTTTCGGCAGGCCCGG CACGGGTCGCGACTGGGCGCTGGACGCCGACGCCGCCAAGCCGATCTTTCAGCAGGCCGTCGACCTCGGCATCACGCTTT GGGATACCGCCAACACCTACAGTCGGGGGACGTCCGAGGAGATCACCGGTGAAGCTGTGAAGCGGTACACGAGCCGCGAC CAGGTCGTGATCGCGACGAAGCTGTTCGCGCCGATGGGCTCCGGCCCCGGCGGCCGGGGCCTTTCGCGCCGCGCCGTCTT CGAGCAGCTCGACGCGTCGCTGCGACGGCTCGGCACCGATTGGATCGACCTTTACCAGATCCACCGATTCGACCCGCACA CCCCCGTCGAGGAGACGATGGAGGCCCTCCACGACGCCGTGAAATCGGGCAAGGTGCGCTACCTGGGCGCTTCCTCGATG TGGGCCTGGCAGTTCTCCAAGCTGCAGTACACCGCGCAGCTGCACGGCTGGACGAAGTTCATCTCCATGCAGGACCAGTA CAACCTCGTCGCCCGCGAGGAAGAGCGCGAGATGTTCCCGCTGCTGTCGGACCAGGGCGTCGGCAGCCTGCCATGGTCGC CGCTCGCTGCCGGCCTGGTGACCCGGCCGTGGGGTGACGCGAGCACGACCCGCGGCGCGCTGAACCCGACGGCCGACGCG TCCGGCACCCCGCTGTTCCTCGACAGCGACCGCGGGACGGTCGACGCGGTCCAGCGCATCGCCGAGGCACGGGGGACCTC GATGGCGCAGGTGGCGATGGCGTGGGTGCTGCGCAACCCTGTCGTGACCGCCCCGATCGTCGGAGCGACCAAGTCGCACC ATCTCGCCGACGCCGTGGCCGCGCTCGACATCAATCTCGGTAAGGACGAGGTCACCGCTCTGGAGGAGAGCTACACGCCG CGCAGGCCGACCTACTACGGCTCCGAGTCGGGGTACTGA
Upstream 100 bases:
>100_bases CACGGCCGGAGAACATGTCACCCTCCCCGCCGCCCGCGTGAAGTCGACATCGCTCCTCCGGCGACCTGGCCTTGTCGTCA ATCCTGTCGAAGGACCCACC
Downstream 100 bases:
>100_bases GCCTGTGACCAGATTCCGTCCTCGACGCACAAGGAGCTGATGCCGATGCAGACCTGGTTGATCACCGGCTGTTCCACGGG CCTGGGCCGCGCGCTCGCGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MEYANLGTSGLKVSRIALGCMSFGRPGTGRDWALDADAAKPIFQQAVDLGITLWDTANTYSRGTSEEITGEAVKRYTSRD QVVIATKLFAPMGSGPGGRGLSRRAVFEQLDASLRRLGTDWIDLYQIHRFDPHTPVEETMEALHDAVKSGKVRYLGASSM WAWQFSKLQYTAQLHGWTKFISMQDQYNLVAREEEREMFPLLSDQGVGSLPWSPLAAGLVTRPWGDASTTRGALNPTADA SGTPLFLDSDRGTVDAVQRIAEARGTSMAQVAMAWVLRNPVVTAPIVGATKSHHLADAVAALDINLGKDEVTALEESYTP RRPTYYGSESGY
Sequences:
>Translated_332_residues MEYANLGTSGLKVSRIALGCMSFGRPGTGRDWALDADAAKPIFQQAVDLGITLWDTANTYSRGTSEEITGEAVKRYTSRD QVVIATKLFAPMGSGPGGRGLSRRAVFEQLDASLRRLGTDWIDLYQIHRFDPHTPVEETMEALHDAVKSGKVRYLGASSM WAWQFSKLQYTAQLHGWTKFISMQDQYNLVAREEEREMFPLLSDQGVGSLPWSPLAAGLVTRPWGDASTTRGALNPTADA SGTPLFLDSDRGTVDAVQRIAEARGTSMAQVAMAWVLRNPVVTAPIVGATKSHHLADAVAALDINLGKDEVTALEESYTP RRPTYYGSESGY >Mature_332_residues MEYANLGTSGLKVSRIALGCMSFGRPGTGRDWALDADAAKPIFQQAVDLGITLWDTANTYSRGTSEEITGEAVKRYTSRD QVVIATKLFAPMGSGPGGRGLSRRAVFEQLDASLRRLGTDWIDLYQIHRFDPHTPVEETMEALHDAVKSGKVRYLGASSM WAWQFSKLQYTAQLHGWTKFISMQDQYNLVAREEEREMFPLLSDQGVGSLPWSPLAAGLVTRPWGDASTTRGALNPTADA SGTPLFLDSDRGTVDAVQRIAEARGTSMAQVAMAWVLRNPVVTAPIVGATKSHHLADAVAALDINLGKDEVTALEESYTP RRPTYYGSESGY
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=311, Percent_Identity=32.7974276527331, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=32.6860841423948, Blast_Score=148, Evalue=6e-36, Organism=Homo sapiens, GI27436964, Length=311, Percent_Identity=29.903536977492, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI27436962, Length=311, Percent_Identity=29.903536977492, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI27436966, Length=311, Percent_Identity=29.5819935691318, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI27436971, Length=317, Percent_Identity=30.5993690851735, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI223718702, Length=206, Percent_Identity=34.9514563106796, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI41152114, Length=205, Percent_Identity=34.1463414634146, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI41327764, Length=206, Percent_Identity=34.4660194174757, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI223718708, Length=161, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=45.9876543209877, Blast_Score=307, Evalue=6e-85, Organism=Escherichia coli, GI1789375, Length=313, Percent_Identity=34.185303514377, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=28.8571428571429, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1788070, Length=333, Percent_Identity=30.3303303303303, Blast_Score=127, Evalue=9e-31, Organism=Escherichia coli, GI1788081, Length=306, Percent_Identity=29.0849673202614, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1787674, Length=320, Percent_Identity=23.75, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48994888, Length=285, Percent_Identity=28.0701754385965, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=336, Percent_Identity=39.5833333333333, Blast_Score=245, Evalue=7e-66, Organism=Saccharomyces cerevisiae, GI6323998, Length=322, Percent_Identity=31.055900621118, Blast_Score=142, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=31.8493150684932, Blast_Score=135, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6319951, Length=322, Percent_Identity=29.1925465838509, Blast_Score=129, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6322615, Length=246, Percent_Identity=32.9268292682927, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321052, Length=162, Percent_Identity=31.4814814814815, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640980, Length=328, Percent_Identity=28.6585365853659, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI45549126, Length=328, Percent_Identity=28.6585365853659, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24646155, Length=320, Percent_Identity=26.875, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24646159, Length=287, Percent_Identity=27.1777003484321, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36250; Mature: 36250
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYANLGTSGLKVSRIALGCMSFGRPGTGRDWALDADAAKPIFQQAVDLGITLWDTANTY CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCEEEECCCCCC SRGTSEEITGEAVKRYTSRDQVVIATKLFAPMGSGPGGRGLSRRAVFEQLDASLRRLGTD CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH WIDLYQIHRFDPHTPVEETMEALHDAVKSGKVRYLGASSMWAWQFSKLQYTAQLHGWTKF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHEEEHHHHHHHHH ISMQDQYNLVAREEEREMFPLLSDQGVGSLPWSPLAAGLVTRPWGDASTTRGALNPTADA HCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC SGTPLFLDSDRGTVDAVQRIAEARGTSMAQVAMAWVLRNPVVTAPIVGATKSHHLADAVA CCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH ALDINLGKDEVTALEESYTPRRPTYYGSESGY HHEECCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEYANLGTSGLKVSRIALGCMSFGRPGTGRDWALDADAAKPIFQQAVDLGITLWDTANTY CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCEEEECCCCCC SRGTSEEITGEAVKRYTSRDQVVIATKLFAPMGSGPGGRGLSRRAVFEQLDASLRRLGTD CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH WIDLYQIHRFDPHTPVEETMEALHDAVKSGKVRYLGASSMWAWQFSKLQYTAQLHGWTKF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHEEEHHHHHHHHH ISMQDQYNLVAREEEREMFPLLSDQGVGSLPWSPLAAGLVTRPWGDASTTRGALNPTADA HCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC SGTPLFLDSDRGTVDAVQRIAEARGTSMAQVAMAWVLRNPVVTAPIVGATKSHHLADAVA CCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH ALDINLGKDEVTALEESYTPRRPTYYGSESGY HHEECCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]