Click here to switch to the map view.

The map label for this gene is abrB [H]

Identifier: 158316311

GI number: 158316311

Start: 5414382

End: 5415458

Strand: Reverse

Name: abrB [H]

Synonym: Franean1_4538

Alternate gene names: 158316311

Gene position: 5415458-5414382 (Counterclockwise)

Preceding gene: 158316312

Following gene: 158316310

Centisome position: 60.29

GC content: 66.11

Gene sequence:

>1077_bases
GTGCAGAGAGATGCTCTGGTCGCAGAGAGCAAACGAGGTTTATGTGGCGTAATCATCCTAGTCGCCGCAACGATACTGAT
GCATCTGGTCCACTCGCCATCTCCGTATCTTCTCGGTGGCCTGATCGGCGGTGCCGCGTTCTCGCTCGCGTTCGGAGCGC
CATGGCGGTTTCCTGAGCCGGCACGGCATTTCGGCATGGCGCTGATCGGGGTCAGCGCGGGCGCGCTGATCGACTCCGAT
GTGATCCGGCGGATAGCCAGCCAGCCCGTTGAGGTACTCGGGGGTGTCGCCGTCACACTGGTCTTTTCGATGGCGACGGG
CCTGGTTCTCGTTTTGTCGCCGAAGGTCAACCTGGCCACGGCGGTCTTCTCCTCGATGGCGGGCGCTGCCTCCGGCGTGT
CGGCCATGGCCAAGGAGCTGGATGCCGACGACGCGATCGTCTCGGCCGTCCAGTACGCGCGCGTGGTGGTTGTCGTGGTT
TCGCTGTCGCTGGTTGCGCCGATCCTCGACCGCTCCGGGAGTCTCTCGCCGGCCGATCGCGGGCCCGCTGCCGTCGAACC
CGTCCTGTGGCAGAGCCTCGTGTTCACGGCACTGTGCATGGGAGTCGGCCTGCTCCTCGCGCAGGTCCTTTCCTTCAGCG
GCTCGCGGTTGGTCGTCCCGATGCTGCTCTCGATGGCGGTTGCGCTGGTGGTCTCCGTCCCGCTTGCCGTCCCGGAGCCG
CTGCTCGATCTCGGTTACACCATCACCGGGCTTGCCGTTGGGTTTTCTTTCACTGCGGCCACGATCCGCCTGTTGATACG
GCTGTTCCCGTTGGTGCTGGTGCAGTTGGTTCTGAGCGTCGGGGGCTGCGCCGTGATCGGAATCGTGTTCGCCCGGGCGG
TCGGAATTCCGGACCTCGCTGGATACCTGGCGATGACCCCGGGCGGTCTCCCGGCGGTGACGGCTGTCGCGGTCCAGTCC
GGCGCGGAGGTCGGACTGGTCATCACGATGCAGCTCGTACGGGTGTTCGCCGCCATCCTGAGCGCGTCACTCATCGGCAC
CCTGGTCAGGCGCCGGAGCCGGCTGACGGGTGCCTGA

Upstream 100 bases:

>100_bases
ACTCTGTGTCCGCCGGCGGACCTGATCTCTGCTTCCGCTTATCTGTGGGTAATCGCACGTCGGCGCAGGCGTCATCCGTC
GCCATCGGCAGCGTGATGTA

Downstream 100 bases:

>100_bases
CCATCCCGGTCCACCCATCACCGACGATCCTATGTGCGCACAGATATTCATATATGCGAACTCTGCGCTAGGCTGGAGCG
AGAGGCCTTGTCAGGGTTGT

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MQRDALVAESKRGLCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSAGALIDSD
VIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGVSAMAKELDADDAIVSAVQYARVVVVVV
SLSLVAPILDRSGSLSPADRGPAAVEPVLWQSLVFTALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEP
LLDLGYTITGLAVGFSFTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLAGYLAMTPGGLPAVTAVAVQS
GAEVGLVITMQLVRVFAAILSASLIGTLVRRRSRLTGA

Sequences:

>Translated_358_residues
MQRDALVAESKRGLCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSAGALIDSD
VIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGVSAMAKELDADDAIVSAVQYARVVVVVV
SLSLVAPILDRSGSLSPADRGPAAVEPVLWQSLVFTALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEP
LLDLGYTITGLAVGFSFTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLAGYLAMTPGGLPAVTAVAVQS
GAEVGLVITMQLVRVFAAILSASLIGTLVRRRSRLTGA
>Mature_358_residues
MQRDALVAESKRGLCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSAGALIDSD
VIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGVSAMAKELDADDAIVSAVQYARVVVVVV
SLSLVAPILDRSGSLSPADRGPAAVEPVLWQSLVFTALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEP
LLDLGYTITGLAVGFSFTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLAGYLAMTPGGLPAVTAVAVQS
GAEVGLVITMQLVRVFAAILSASLIGTLVRRRSRLTGA

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=333, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 36550; Mature: 36550

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDALVAESKRGLCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEP
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
ARHFGMALIGVSAGALIDSDVIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLAT
HHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHH
AVFSSMAGAASGVSAMAKELDADDAIVSAVQYARVVVVVVSLSLVAPILDRSGSLSPADR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GPAAVEPVLWQSLVFTALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCH
LLDLGYTITGLAVGFSFTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHH
GYLAMTPGGLPAVTAVAVQSGAEVGLVITMQLVRVFAAILSASLIGTLVRRRSRLTGA
HHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQRDALVAESKRGLCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEP
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
ARHFGMALIGVSAGALIDSDVIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLAT
HHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHH
AVFSSMAGAASGVSAMAKELDADDAIVSAVQYARVVVVVVSLSLVAPILDRSGSLSPADR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GPAAVEPVLWQSLVFTALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCH
LLDLGYTITGLAVGFSFTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHH
GYLAMTPGGLPAVTAVAVQSGAEVGLVITMQLVRVFAAILSASLIGTLVRRRSRLTGA
HHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]