| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316303
Identifier: 158316303
GI number: 158316303
Start: 5404738
End: 5405487
Strand: Reverse
Name: 158316303
Synonym: Franean1_4530
Alternate gene names: NA
Gene position: 5405487-5404738 (Counterclockwise)
Preceding gene: 158316304
Following gene: 158316302
Centisome position: 60.18
GC content: 68.93
Gene sequence:
>750_bases GTGAAGCTGACAGTCACAGCTGTCTCGGTCGGTCGCGTCTTCGGCCTCCAGAAGGCCGCGCTCACCTACCTCCGGGGCTG GGGCGAGACCCTGGACATCCCGCTGATCATGTTCGTGATCCAGGGTGGCGCCACTCCGGTGATCGTCGACACCGGGGCCG ACCTGAGCCGCGCCTGGGAGCACCACCGGATCAGGATGGAGCAGACGCCCGAGGAGCTGCCCGACGCGGCGGTGCGCGCG CTGGGCATCGACCCCGATGAGGTGGGCCTGGTCGTCAACACCCACCTGCACTGGGACCACTGCTCGAACAACCACCTGTT CCCCAATGCCCGAATCGTCCTTCAGCGGCGCGAGATCGATTTCGCGCGGAGGCCGGTCGAGTGGCATCGGCGCCAGTTCG AGGCCGTGCCCGACCTGATCCCGGCGTGGCTACGCGCCGAGGACCGGATCGACGCGATCGACGGCGACACCGACCTGGCG CCGGGGGTCTCGGTGGTCGCCCTGCCCGGTCACACGCCGGGTTCGCAAGGGGTCGTGGTCGAGGCTGAGACGAACCGCTA CCTGCTCGCGGGTGACTGCGTCGATCTGTACGAGAACTGGGCGGGCGACGCGGAGGCCGACCGCATCCCGTCCGGCTTCT TCACCGATCTCGTGGCCTACGAGGAGAGCGTGCGGCGGATCGAGCGGTTCGGCTGCGAGGTGATCCCGAGCCACGACCCG CAGGTGGTCGAGCGTCGGGTCTTCCGTTGA
Upstream 100 bases:
>100_bases CCGCCTACTGCGTGGTGAGCCTGCTGTGCGTACTGGCTCTGCGGGAGACCGTCGGCAACGAAATGATCGAGACGCCCGCA GCGCAGCAGGGGGTGACATC
Downstream 100 bases:
>100_bases GCGCACGCTGCCATGGGCGATTGCAGGTCGTCAAGCGCCTGTCGGCAGTCCGAGTTTGTTTGCGAACAAGTCCGTCGAGC CGAATACGCGAGCAGACGGG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWEHHRIRMEQTPEELPDAAVRA LGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREIDFARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLA PGVSVVALPGHTPGSQGVVVEAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP QVVERRVFR
Sequences:
>Translated_249_residues MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWEHHRIRMEQTPEELPDAAVRA LGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREIDFARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLA PGVSVVALPGHTPGSQGVVVEAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP QVVERRVFR >Mature_249_residues MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWEHHRIRMEQTPEELPDAAVRA LGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREIDFARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLA PGVSVVALPGHTPGSQGVVVEAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP QVVERRVFR
Specific function: Involved in the degradation of pyridoxine or pyridoxamine (free, phosphate-unbound, forms of vitamin B6). Hydrolyzes 4-pyridoxolactone to 4-pyridoxic acid. Has lower activity toward N-hexanoyl-D,L-homoserine lactone, but is not active toward 5-pyridoxolac
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.1.27 [H]
Molecular weight: Translated: 27901; Mature: 27901
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWE CEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEEECCCCHHHHHH HHRIRMEQTPEELPDAAVRALGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREID HHHEECCCCHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCH FARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLAPGVSVVALPGHTPGSQGVVV HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE EAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP EECCCCEEEECCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCH QVVERRVFR HHHHHHCCC >Mature Secondary Structure MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWE CEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEEECCCCHHHHHH HHRIRMEQTPEELPDAAVRALGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREID HHHEECCCCHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCH FARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLAPGVSVVALPGHTPGSQGVVV HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE EAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP EECCCCEEEECCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCH QVVERRVFR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]