Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316303

Identifier: 158316303

GI number: 158316303

Start: 5404738

End: 5405487

Strand: Reverse

Name: 158316303

Synonym: Franean1_4530

Alternate gene names: NA

Gene position: 5405487-5404738 (Counterclockwise)

Preceding gene: 158316304

Following gene: 158316302

Centisome position: 60.18

GC content: 68.93

Gene sequence:

>750_bases
GTGAAGCTGACAGTCACAGCTGTCTCGGTCGGTCGCGTCTTCGGCCTCCAGAAGGCCGCGCTCACCTACCTCCGGGGCTG
GGGCGAGACCCTGGACATCCCGCTGATCATGTTCGTGATCCAGGGTGGCGCCACTCCGGTGATCGTCGACACCGGGGCCG
ACCTGAGCCGCGCCTGGGAGCACCACCGGATCAGGATGGAGCAGACGCCCGAGGAGCTGCCCGACGCGGCGGTGCGCGCG
CTGGGCATCGACCCCGATGAGGTGGGCCTGGTCGTCAACACCCACCTGCACTGGGACCACTGCTCGAACAACCACCTGTT
CCCCAATGCCCGAATCGTCCTTCAGCGGCGCGAGATCGATTTCGCGCGGAGGCCGGTCGAGTGGCATCGGCGCCAGTTCG
AGGCCGTGCCCGACCTGATCCCGGCGTGGCTACGCGCCGAGGACCGGATCGACGCGATCGACGGCGACACCGACCTGGCG
CCGGGGGTCTCGGTGGTCGCCCTGCCCGGTCACACGCCGGGTTCGCAAGGGGTCGTGGTCGAGGCTGAGACGAACCGCTA
CCTGCTCGCGGGTGACTGCGTCGATCTGTACGAGAACTGGGCGGGCGACGCGGAGGCCGACCGCATCCCGTCCGGCTTCT
TCACCGATCTCGTGGCCTACGAGGAGAGCGTGCGGCGGATCGAGCGGTTCGGCTGCGAGGTGATCCCGAGCCACGACCCG
CAGGTGGTCGAGCGTCGGGTCTTCCGTTGA

Upstream 100 bases:

>100_bases
CCGCCTACTGCGTGGTGAGCCTGCTGTGCGTACTGGCTCTGCGGGAGACCGTCGGCAACGAAATGATCGAGACGCCCGCA
GCGCAGCAGGGGGTGACATC

Downstream 100 bases:

>100_bases
GCGCACGCTGCCATGGGCGATTGCAGGTCGTCAAGCGCCTGTCGGCAGTCCGAGTTTGTTTGCGAACAAGTCCGTCGAGC
CGAATACGCGAGCAGACGGG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWEHHRIRMEQTPEELPDAAVRA
LGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREIDFARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLA
PGVSVVALPGHTPGSQGVVVEAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP
QVVERRVFR

Sequences:

>Translated_249_residues
MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWEHHRIRMEQTPEELPDAAVRA
LGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREIDFARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLA
PGVSVVALPGHTPGSQGVVVEAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP
QVVERRVFR
>Mature_249_residues
MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWEHHRIRMEQTPEELPDAAVRA
LGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREIDFARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLA
PGVSVVALPGHTPGSQGVVVEAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP
QVVERRVFR

Specific function: Involved in the degradation of pyridoxine or pyridoxamine (free, phosphate-unbound, forms of vitamin B6). Hydrolyzes 4-pyridoxolactone to 4-pyridoxic acid. Has lower activity toward N-hexanoyl-D,L-homoserine lactone, but is not active toward 5-pyridoxolac

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: =3.1.1.27 [H]

Molecular weight: Translated: 27901; Mature: 27901

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWE
CEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEEECCCCHHHHHH
HHRIRMEQTPEELPDAAVRALGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREID
HHHEECCCCHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCH
FARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLAPGVSVVALPGHTPGSQGVVV
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE
EAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP
EECCCCEEEECCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCH
QVVERRVFR
HHHHHHCCC
>Mature Secondary Structure
MKLTVTAVSVGRVFGLQKAALTYLRGWGETLDIPLIMFVIQGGATPVIVDTGADLSRAWE
CEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEEECCCCHHHHHH
HHRIRMEQTPEELPDAAVRALGIDPDEVGLVVNTHLHWDHCSNNHLFPNARIVLQRREID
HHHEECCCCHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCH
FARRPVEWHRRQFEAVPDLIPAWLRAEDRIDAIDGDTDLAPGVSVVALPGHTPGSQGVVV
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEE
EAETNRYLLAGDCVDLYENWAGDAEADRIPSGFFTDLVAYEESVRRIERFGCEVIPSHDP
EECCCCEEEECCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCH
QVVERRVFR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]