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The map label for this gene is frc [H]

Identifier: 158316271

GI number: 158316271

Start: 5362502

End: 5363827

Strand: Reverse

Name: frc [H]

Synonym: Franean1_4496

Alternate gene names: 158316271

Gene position: 5363827-5362502 (Counterclockwise)

Preceding gene: 158316274

Following gene: 158316270

Centisome position: 59.72

GC content: 70.81

Gene sequence:

>1326_bases
GTGTCGTCCACTGACCAGCGGGTCGATCACCCGTCAAGATCTGCCGCCGCCCGACGCGGCCGCGGCGAGGGGCCGCTCGC
CGGGGTCCGGATCGCGGACTTCTGCTGGGTCGGCGTCGGAGCGCTGGCCACCCGGACGCTCGCGGACTTCGGCGCGGAGG
TCATCAAGATCGAGGACCGGCGGCGGATGGATCTGACGCGCCGGATGCCGATCTACAAGGGTGCTGCGCGGCCGGTTGGG
GAGGAGGACACCGGCGAGATCGACCCCGACCTGAGCGGGCACTTCAACAACTACAACCGCAACAAGCTGAGCGTGAACAT
CGACATGCGCTCGGAGAAGGGCCGGGATGTCGCCCGCCGGCTGATCGCGAACTGCGGTGTGGTCACCGAGAACTTCTCGC
CCGGGGTGATGGAGCGCTGGGGGCTGACCTACGAGGCGATGCGTGAGCTGAACCCCTCGGTGATCTACGCGCGAATGAGC
GGCTTCGGGCACTCCGGCCCCGACACCGCCTATCGCAGTTACGGGCCGGTCGTGCAGGCCGTCGGCGGGCTGACTTTCGG
GGCCGGCCTGCCGGGCCGCGAGCCGTCCGGCTGGGGCATGTCGTACATGGACAACATGGCCGCCTACAACGGGTCGATCG
CGGTGCTGATGGCGATCTACCGGCGCAACGCTACCGGTGAGGGATGCGAGATCGACGTCTCGGCGCTGGAGGCGTCGGTC
GCGCTGCTCGGTCCGGTGCTGCTCGACGTGAGCGTGAACGGGCGGGCGACGCGCGGCATGGAGGGCTATCCGCCCGGCAA
CCTGCAGCTGTACTCGGACGCCGCGCCGCACGGCGTGTACCCCGCCGCCGGGGAGGACCGGTGGATCGCGATCTCGGTCT
TCGACGACGACGACTGGGGTGCCCTGAGAGCGGCGCTGGGCGGGCCGGCATGGTGTGACGACCCGCGGTTCGCCGACCAG
CGGTCGCGGCGGCGGGAGCACGCCGCGCTCGACGCCCACCTCGCGGCCTGGACCGCGCAGCGGGACCCGCGGGAGGCGAT
GGAACACCTCCAGGCCCACGGGGTGCGCGCGGCCGCCGTGCAGAACTCGCAGGAGATCTGCGAGGTCGATCCCCAGCTGG
CGCACCGGGGGACCCTCATCGAGATGGACCATCCGAAGATCGGGCCCGCACGCCTGGAGGGCCTGCCCTTCACGGCGGCG
GAGACGAAGCCCGCGCACTGGCGGTCGGCTCCGCTGCTGGCCGAGGACAACGAGTACGTCTTCTCGGAGATCGTCGGGAT
GTCCCGCGCCGAGATCGACGTGCTGACGGACGAGGGTGTGCTGTGA

Upstream 100 bases:

>100_bases
CGTGCGCCGATTGCGTCGGAAATGTCCATTCGGCGACTATTCGGGCGGACCGACCGTCCGCCCGCGCCGAGTACGTCCCG
TGAAAGTGAGGTGAGGGCCA

Downstream 100 bases:

>100_bases
CCGCCGTGCCGCCCACCGACGCAGCCGCCCCGCCGTACCGGGGCCTGCGTGTCGTCGAGGTCGCCGCCGACGTGGCGGGG
GAGTTCTGCACCCGGCTCCT

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSSTDQRVDHPSRSAAARRGRGEGPLAGVRIADFCWVGVGALATRTLADFGAEVIKIEDRRRMDLTRRMPIYKGAARPVG
EEDTGEIDPDLSGHFNNYNRNKLSVNIDMRSEKGRDVARRLIANCGVVTENFSPGVMERWGLTYEAMRELNPSVIYARMS
GFGHSGPDTAYRSYGPVVQAVGGLTFGAGLPGREPSGWGMSYMDNMAAYNGSIAVLMAIYRRNATGEGCEIDVSALEASV
ALLGPVLLDVSVNGRATRGMEGYPPGNLQLYSDAAPHGVYPAAGEDRWIAISVFDDDDWGALRAALGGPAWCDDPRFADQ
RSRRREHAALDAHLAAWTAQRDPREAMEHLQAHGVRAAAVQNSQEICEVDPQLAHRGTLIEMDHPKIGPARLEGLPFTAA
ETKPAHWRSAPLLAEDNEYVFSEIVGMSRAEIDVLTDEGVL

Sequences:

>Translated_441_residues
MSSTDQRVDHPSRSAAARRGRGEGPLAGVRIADFCWVGVGALATRTLADFGAEVIKIEDRRRMDLTRRMPIYKGAARPVG
EEDTGEIDPDLSGHFNNYNRNKLSVNIDMRSEKGRDVARRLIANCGVVTENFSPGVMERWGLTYEAMRELNPSVIYARMS
GFGHSGPDTAYRSYGPVVQAVGGLTFGAGLPGREPSGWGMSYMDNMAAYNGSIAVLMAIYRRNATGEGCEIDVSALEASV
ALLGPVLLDVSVNGRATRGMEGYPPGNLQLYSDAAPHGVYPAAGEDRWIAISVFDDDDWGALRAALGGPAWCDDPRFADQ
RSRRREHAALDAHLAAWTAQRDPREAMEHLQAHGVRAAAVQNSQEICEVDPQLAHRGTLIEMDHPKIGPARLEGLPFTAA
ETKPAHWRSAPLLAEDNEYVFSEIVGMSRAEIDVLTDEGVL
>Mature_440_residues
SSTDQRVDHPSRSAAARRGRGEGPLAGVRIADFCWVGVGALATRTLADFGAEVIKIEDRRRMDLTRRMPIYKGAARPVGE
EDTGEIDPDLSGHFNNYNRNKLSVNIDMRSEKGRDVARRLIANCGVVTENFSPGVMERWGLTYEAMRELNPSVIYARMSG
FGHSGPDTAYRSYGPVVQAVGGLTFGAGLPGREPSGWGMSYMDNMAAYNGSIAVLMAIYRRNATGEGCEIDVSALEASVA
LLGPVLLDVSVNGRATRGMEGYPPGNLQLYSDAAPHGVYPAAGEDRWIAISVFDDDDWGALRAALGGPAWCDDPRFADQR
SRRREHAALDAHLAAWTAQRDPREAMEHLQAHGVRAAAVQNSQEICEVDPQLAHRGTLIEMDHPKIGPARLEGLPFTAAE
TKPAHWRSAPLLAEDNEYVFSEIVGMSRAEIDVLTDEGVL

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=421, Percent_Identity=25.6532066508314, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI300863124, Length=447, Percent_Identity=24.3847874720358, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI300863126, Length=169, Percent_Identity=35.5029585798817, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI13376042, Length=447, Percent_Identity=21.2527964205817, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI266456254, Length=421, Percent_Identity=21.6152019002375, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI42794625, Length=222, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI266458397, Length=222, Percent_Identity=27.027027027027, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI266458393, Length=222, Percent_Identity=27.027027027027, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI266458395, Length=141, Percent_Identity=30.4964539007092, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI1788717, Length=422, Percent_Identity=27.9620853080569, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI87082093, Length=359, Percent_Identity=27.0194986072423, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786222, Length=433, Percent_Identity=24.2494226327945, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648431, Length=419, Percent_Identity=26.7303102625298, Blast_Score=134, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 47974; Mature: 47843

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTDQRVDHPSRSAAARRGRGEGPLAGVRIADFCWVGVGALATRTLADFGAEVIKIEDR
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
RRMDLTRRMPIYKGAARPVGEEDTGEIDPDLSGHFNNYNRNKLSVNIDMRSEKGRDVARR
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHH
LIANCGVVTENFSPGVMERWGLTYEAMRELNPSVIYARMSGFGHSGPDTAYRSYGPVVQA
HHHHCCEEECCCCCCHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCHHHHH
VGGLTFGAGLPGREPSGWGMSYMDNMAAYNGSIAVLMAIYRRNATGEGCEIDVSALEASV
HCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHH
ALLGPVLLDVSVNGRATRGMEGYPPGNLQLYSDAAPHGVYPAAGEDRWIAISVFDDDDWG
HHHCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHH
ALRAALGGPAWCDDPRFADQRSRRREHAALDAHLAAWTAQRDPREAMEHLQAHGVRAAAV
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHH
QNSQEICEVDPQLAHRGTLIEMDHPKIGPARLEGLPFTAAETKPAHWRSAPLLAEDNEYV
CCCHHHHHCCHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHH
FSEIVGMSRAEIDVLTDEGVL
HHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SSTDQRVDHPSRSAAARRGRGEGPLAGVRIADFCWVGVGALATRTLADFGAEVIKIEDR
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
RRMDLTRRMPIYKGAARPVGEEDTGEIDPDLSGHFNNYNRNKLSVNIDMRSEKGRDVARR
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHH
LIANCGVVTENFSPGVMERWGLTYEAMRELNPSVIYARMSGFGHSGPDTAYRSYGPVVQA
HHHHCCEEECCCCCCHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCHHHHH
VGGLTFGAGLPGREPSGWGMSYMDNMAAYNGSIAVLMAIYRRNATGEGCEIDVSALEASV
HCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHH
ALLGPVLLDVSVNGRATRGMEGYPPGNLQLYSDAAPHGVYPAAGEDRWIAISVFDDDDWG
HHHCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHH
ALRAALGGPAWCDDPRFADQRSRRREHAALDAHLAAWTAQRDPREAMEHLQAHGVRAAAV
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHH
QNSQEICEVDPQLAHRGTLIEMDHPKIGPARLEGLPFTAAETKPAHWRSAPLLAEDNEYV
CCCHHHHHCCHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHH
FSEIVGMSRAEIDVLTDEGVL
HHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA