Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316269

Identifier: 158316269

GI number: 158316269

Start: 5360821

End: 5361222

Strand: Reverse

Name: 158316269

Synonym: Franean1_4494

Alternate gene names: NA

Gene position: 5361222-5360821 (Counterclockwise)

Preceding gene: 158316270

Following gene: 158316268

Centisome position: 59.69

GC content: 64.93

Gene sequence:

>402_bases
ATGGCAACGATCTACAAAACAGTCGACCTGGACATCAGTTCCGACGCGGCCTGGGCCTTCGTCGAGAAGTTCGTCCGCTC
CGAGGTGCACGTCTTCAGTAACTCGGCGAGCGAGCGCCAGGACGGCAACTACCGGGTGGTGACCGACCACGAGGGCGCGG
AGTTCTGGGAGCTCAACGTCGGGATCGACGCCGAGCACCGGTACTCCTCCTACACCGTGCCCGATCTGTTCGGCGCCACG
TTCCACGCGGCCTCGATGCAGATCCTCGACAACGGCGGCCCGGGCTGCCGGTTCGTCTGGATCACCGACGTCCTGCCGGA
CTCGTTCGCCGAGGATCTCCGCGGGTTCTACGACAACCTCTTCGCCGAGCTGGTGGCGGCAATCAAGGGCAGCTCGGCGT
GA

Upstream 100 bases:

>100_bases
CTGATCTCGTGCCCGGCCAGGTCTGAACCTGACCGCGCGGCCGGCCCGGCCGGCCCGGCCGGCCGCGTCGCGCCGGCCCG
TCCCGTCCCGAGGGAGTGCA

Downstream 100 bases:

>100_bases
CGGGCGGTGCGGCGGGTGGCGCGGCGGTGCGCAAGCCCGTTCCTCTCCCCGAACCCGCCAGCGAGGGGTTCTGGGCCGCG
GCCCGGGACGGCCGGCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MATIYKTVDLDISSDAAWAFVEKFVRSEVHVFSNSASERQDGNYRVVTDHEGAEFWELNVGIDAEHRYSSYTVPDLFGAT
FHAASMQILDNGGPGCRFVWITDVLPDSFAEDLRGFYDNLFAELVAAIKGSSA

Sequences:

>Translated_133_residues
MATIYKTVDLDISSDAAWAFVEKFVRSEVHVFSNSASERQDGNYRVVTDHEGAEFWELNVGIDAEHRYSSYTVPDLFGAT
FHAASMQILDNGGPGCRFVWITDVLPDSFAEDLRGFYDNLFAELVAAIKGSSA
>Mature_132_residues
ATIYKTVDLDISSDAAWAFVEKFVRSEVHVFSNSASERQDGNYRVVTDHEGAEFWELNVGIDAEHRYSSYTVPDLFGATF
HAASMQILDNGGPGCRFVWITDVLPDSFAEDLRGFYDNLFAELVAAIKGSSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14766; Mature: 14635

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIYKTVDLDISSDAAWAFVEKFVRSEVHVFSNSASERQDGNYRVVTDHEGAEFWELNV
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEC
GIDAEHRYSSYTVPDLFGATFHAASMQILDNGGPGCRFVWITDVLPDSFAEDLRGFYDNL
CCCCCCCCCCCCCHHHHCCHHHHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHH
FAELVAAIKGSSA
HHHHHHHHCCCCC
>Mature Secondary Structure 
ATIYKTVDLDISSDAAWAFVEKFVRSEVHVFSNSASERQDGNYRVVTDHEGAEFWELNV
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEC
GIDAEHRYSSYTVPDLFGATFHAASMQILDNGGPGCRFVWITDVLPDSFAEDLRGFYDNL
CCCCCCCCCCCCCHHHHCCHHHHHEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHH
FAELVAAIKGSSA
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA