| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316200
Identifier: 158316200
GI number: 158316200
Start: 5284765
End: 5285004
Strand: Reverse
Name: 158316200
Synonym: Franean1_4423
Alternate gene names: NA
Gene position: 5285004-5284765 (Counterclockwise)
Preceding gene: 158316202
Following gene: 158316199
Centisome position: 58.84
GC content: 64.17
Gene sequence:
>240_bases TTGCAAGCGGACCAGCAAGAAGCAGCAGAACCCGCCGCGATGATCTCGCTTGCTGGCTCCGAAGGGGAGCTTGGCCTCGA CCGCGTGATTGGCATGGGTGTGCAGAGTCTCTGGCATTGCACGGAAGCCCGCTTGGTCGAGGTCGCCCAGAACCGCGCCG AACCGGAAGTGTTCGGATCGGATGCGTCATGCCCGCCGGACGTCGTCCACGGCAGGCTGGCACAGCGATGTCATGGCTGA
Upstream 100 bases:
>100_bases TCACGGCAGCGGGGCAGGGCGTGCCTCTGAGCTGCGGCGATGAGCAGCATCGCGGCGGACGACCGTCCGCTGCAACGGCG GACGGTCCAGGTCGCGGGTT
Downstream 100 bases:
>100_bases GCAGACCCCGGCCGCTTCCGGTAGCACAATGTCCAGGCAGCGGGAACAGGTGCTTGTGGAGGTGATGCTGCGCCATCAGG TGCAGATCGATCCCGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MQADQQEAAEPAAMISLAGSEGELGLDRVIGMGVQSLWHCTEARLVEVAQNRAEPEVFGSDASCPPDVVHGRLAQRCHG
Sequences:
>Translated_79_residues MQADQQEAAEPAAMISLAGSEGELGLDRVIGMGVQSLWHCTEARLVEVAQNRAEPEVFGSDASCPPDVVHGRLAQRCHG >Mature_79_residues MQADQQEAAEPAAMISLAGSEGELGLDRVIGMGVQSLWHCTEARLVEVAQNRAEPEVFGSDASCPPDVVHGRLAQRCHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8385; Mature: 8385
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQADQQEAAEPAAMISLAGSEGELGLDRVIGMGVQSLWHCTEARLVEVAQNRAEPEVFGS CCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DASCPPDVVHGRLAQRCHG CCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQADQQEAAEPAAMISLAGSEGELGLDRVIGMGVQSLWHCTEARLVEVAQNRAEPEVFGS CCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DASCPPDVVHGRLAQRCHG CCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA