Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316198

Identifier: 158316198

GI number: 158316198

Start: 5282233

End: 5283303

Strand: Reverse

Name: 158316198

Synonym: Franean1_4421

Alternate gene names: NA

Gene position: 5283303-5282233 (Counterclockwise)

Preceding gene: 158316199

Following gene: 158316197

Centisome position: 58.82

GC content: 66.48

Gene sequence:

>1071_bases
GTGAGATCACATCTGTCCATGCGGACGCGCGCAGCGGGAACAGCACTGGTCCTGGGCGCCGCGCTGGCGGTGGCCTTCCC
GGCCGCGGCGCACGCCAACACCGTGGGCGTCACAGTGAAGTCACCCGGGGCTACCAGCGGTCCTGCAAGCGCTAACTCCG
AGATCTCAACCCACGCGGACTGCAGTAGCGGCCTGATCTCCGGCGGTGGGATCAACCAGGCCACCGGCAACGGCAACGGC
AACCATGTGATGGGCACCTCGCCCAGCTCCGACGGCTCCACCGAATACACCGGTTCCACCGGGGTTGTCGGCACCGACGT
GACGCACTGGCTCGGGATTGGCGGAAGCGGCGGCCAGGTCGACAGTTCCTTCTCCACCACCCCCTTCGCGGTGTGCTTCA
CCAGCAACCTGATCAACCACACCCAGGTGGTCATGAACAAGACCAACGCGCCCACCAGCGGGTCGACGGTGGGCCTGGTC
ACCGCGACCTGCCCGGCGAACACGGTCCTGCTCGGCGGCGGGGCGCGTGTCACCCCGGCCAGCGTCGGCAACTTCAAGCC
GATCGCCAGCTTCCCCACCTTCAACAACTCCGCACATGACTACGGCCAGAAAGCCGCAGCCGACGGCGAGACCAACCCCA
ACGCCTGGACCGCCGTCGGGTGGGCTAACGGCACCAACAGCACCAACGAGACCTACGCCTACGCGATCTGCAGCGGAAAC
AACATCAATATCAGTGGCGTCACCGTGAAGGTCCACTTCAGCGAGGCGAGCGGCCCGACCACGGGGAGCACAGGCCAGAA
GGTGACAGTCAACTGCCCCAGCGGGGACGGGAAACTGATCAGCGGGGGCGCCGCCATCAGCGGAGGCAGCGTGACCACGA
CGGACTTCACCGGACCGGGCTCAGGCGGCGACCACCTTAACGGAAGTTTCCCCAGCGACTCGAGCGGAAACCCGGTCAGT
GACGGGACCACCACGGCTGCGTACTGGACAGCCTTCACCCATACCGGGGGTACAAGCTCGCCGAACACCTACTCCGACGT
CTGGGCGCTGTGCGCCAACGACGGCGTCTGA

Upstream 100 bases:

>100_bases
GTGCAGCGTCGCACACCCTGCGTTTCACGCACAGAAGTTGTCATCCTCGGTGTGGACGGGCACATCCGCTCGCGTCGCAC
ACCCCTGACGGAAGGTCGAC

Downstream 100 bases:

>100_bases
AGACACCTGTAACCCCGGTCCGCGGGCGGGCGCGGCACCTAGCATGGCCCGCCCGACGTTTCGTCTCGTGACGAAACGCG
GTTTCTGCAACACCCACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRSHLSMRTRAAGTALVLGAALAVAFPAAAHANTVGVTVKSPGATSGPASANSEISTHADCSSGLISGGGINQATGNGNG
NHVMGTSPSSDGSTEYTGSTGVVGTDVTHWLGIGGSGGQVDSSFSTTPFAVCFTSNLINHTQVVMNKTNAPTSGSTVGLV
TATCPANTVLLGGGARVTPASVGNFKPIASFPTFNNSAHDYGQKAAADGETNPNAWTAVGWANGTNSTNETYAYAICSGN
NINISGVTVKVHFSEASGPTTGSTGQKVTVNCPSGDGKLISGGAAISGGSVTTTDFTGPGSGGDHLNGSFPSDSSGNPVS
DGTTTAAYWTAFTHTGGTSSPNTYSDVWALCANDGV

Sequences:

>Translated_356_residues
MRSHLSMRTRAAGTALVLGAALAVAFPAAAHANTVGVTVKSPGATSGPASANSEISTHADCSSGLISGGGINQATGNGNG
NHVMGTSPSSDGSTEYTGSTGVVGTDVTHWLGIGGSGGQVDSSFSTTPFAVCFTSNLINHTQVVMNKTNAPTSGSTVGLV
TATCPANTVLLGGGARVTPASVGNFKPIASFPTFNNSAHDYGQKAAADGETNPNAWTAVGWANGTNSTNETYAYAICSGN
NINISGVTVKVHFSEASGPTTGSTGQKVTVNCPSGDGKLISGGAAISGGSVTTTDFTGPGSGGDHLNGSFPSDSSGNPVS
DGTTTAAYWTAFTHTGGTSSPNTYSDVWALCANDGV
>Mature_356_residues
MRSHLSMRTRAAGTALVLGAALAVAFPAAAHANTVGVTVKSPGATSGPASANSEISTHADCSSGLISGGGINQATGNGNG
NHVMGTSPSSDGSTEYTGSTGVVGTDVTHWLGIGGSGGQVDSSFSTTPFAVCFTSNLINHTQVVMNKTNAPTSGSTVGLV
TATCPANTVLLGGGARVTPASVGNFKPIASFPTFNNSAHDYGQKAAADGETNPNAWTAVGWANGTNSTNETYAYAICSGN
NINISGVTVKVHFSEASGPTTGSTGQKVTVNCPSGDGKLISGGAAISGGSVTTTDFTGPGSGGDHLNGSFPSDSSGNPVS
DGTTTAAYWTAFTHTGGTSSPNTYSDVWALCANDGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35040; Mature: 35040

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSHLSMRTRAAGTALVLGAALAVAFPAAAHANTVGVTVKSPGATSGPASANSEISTHAD
CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
CSSGLISGGGINQATGNGNGNHVMGTSPSSDGSTEYTGSTGVVGTDVTHWLGIGGSGGQV
CCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCEECCHHHHEEECCCCCCC
DSSFSTTPFAVCFTSNLINHTQVVMNKTNAPTSGSTVGLVTATCPANTVLLGGGARVTPA
CCCCCCCCEEEEEEHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEECCCCEECCC
SVGNFKPIASFPTFNNSAHDYGQKAAADGETNPNAWTAVGWANGTNSTNETYAYAICSGN
CCCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCC
NINISGVTVKVHFSEASGPTTGSTGQKVTVNCPSGDGKLISGGAAISGGSVTTTDFTGPG
EEEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEECCCEECCCEEEEEECCCCC
SGGDHLNGSFPSDSSGNPVSDGTTTAAYWTAFTHTGGTSSPNTYSDVWALCANDGV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHEECCCCC
>Mature Secondary Structure
MRSHLSMRTRAAGTALVLGAALAVAFPAAAHANTVGVTVKSPGATSGPASANSEISTHAD
CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
CSSGLISGGGINQATGNGNGNHVMGTSPSSDGSTEYTGSTGVVGTDVTHWLGIGGSGGQV
CCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCEECCHHHHEEECCCCCCC
DSSFSTTPFAVCFTSNLINHTQVVMNKTNAPTSGSTVGLVTATCPANTVLLGGGARVTPA
CCCCCCCCEEEEEEHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEECCCCEECCC
SVGNFKPIASFPTFNNSAHDYGQKAAADGETNPNAWTAVGWANGTNSTNETYAYAICSGN
CCCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCC
NINISGVTVKVHFSEASGPTTGSTGQKVTVNCPSGDGKLISGGAAISGGSVTTTDFTGPG
EEEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEECCCEECCCEEEEEECCCCC
SGGDHLNGSFPSDSSGNPVSDGTTTAAYWTAFTHTGGTSSPNTYSDVWALCANDGV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA