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The map label for this gene is 158316146

Identifier: 158316146

GI number: 158316146

Start: 5214077

End: 5214898

Strand: Reverse

Name: 158316146

Synonym: Franean1_4364

Alternate gene names: NA

Gene position: 5214898-5214077 (Counterclockwise)

Preceding gene: 158316147

Following gene: 158316145

Centisome position: 58.06

GC content: 65.21

Gene sequence:

>822_bases
ATGGGTACCGCAGCAAATCCGACCGTGGTAAGCCTCGCGGCCGCCCACCCCCATCTGGATGCGTCCTACAACCTGTATTT
CGTCGGACTTTCCTATGGCTTAGCGGTGCTCGGCTCCTTTGCGGCCCTGGCCAGCGCGACCCGGATCCGGGAGTACCGCG
GGGCCAAGCGGCTTGGCTGGGCGGCGGTGACGGCCCTGGCGCTGGGTGGCGGCGGGATCTGGTCGATGCATTTCGTCGGG
ATGGTCGCCTATCACATCGAGGTCCCCGTCAGCTTCGACCTCCGGATCACCCTGCTGTCGCTCGTCATCGCGGTCGCCGT
CTCCGGGGTGGGAATCTGGGTGGTGGCCGCAGACCCGTTCAACACCGACAGGCTCGTTCGTGGCGGCATCTTCGCAGGGC
TGGGTATCGCGGCGATGCACTACACCGGGATGGCGGCGATGCGGACCGCCGGGGCGATCGACTACAGCCCCAGCTTGGTG
TTGATCTCTGTTGTCATCGCCACAGTGGCCGCCACTGTCGCCTTCTGGATCGCGTTCCGTGTCGGCGGCATCATCCGGGT
CCTCAGCGCATCCGCGGTCATGGCTGGCGCGGTCTGCGGGATGCACTACACGGCGATGGCGGCAACCCGTGTCACGCCCG
ATCCGAGCCTGTATCCACAGGTCGGATGCGACCCGTTCACGCTGGGCATTCTCACCACGTTCGGGTCGACCATCGTGCTG
ATGTTCATCATCGTCACCGCGCTCGGCGGTGTCACCAGCCCCGAGTTCCATGTCCGCAGAATCTGGCAAGACAGGATCTT
CGTCTCGTCTCAGAAGCCGTGA

Upstream 100 bases:

>100_bases
AGGGGTGGTCTGCCTCGCCGGGGCCGGGATTCCACCGCAGGGAAGCGATAGGAATCTCTGCGACAGTGAAGTCGCAAAAC
GGGGAGTAGCGGTGAATGGC

Downstream 100 bases:

>100_bases
TTGATCTTGCGATGATCGACCTCATGGCCCGCCGCGCCACCGGCGAATCAACCCCAACCTGGCGAGGAACCTAAACCCGA
ATCAAGCAGAACCCGCAGGA

Product: putative integral membrane sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MGTAANPTVVSLAAAHPHLDASYNLYFVGLSYGLAVLGSFAALASATRIREYRGAKRLGWAAVTALALGGGGIWSMHFVG
MVAYHIEVPVSFDLRITLLSLVIAVAVSGVGIWVVAADPFNTDRLVRGGIFAGLGIAAMHYTGMAAMRTAGAIDYSPSLV
LISVVIATVAATVAFWIAFRVGGIIRVLSASAVMAGAVCGMHYTAMAATRVTPDPSLYPQVGCDPFTLGILTTFGSTIVL
MFIIVTALGGVTSPEFHVRRIWQDRIFVSSQKP

Sequences:

>Translated_273_residues
MGTAANPTVVSLAAAHPHLDASYNLYFVGLSYGLAVLGSFAALASATRIREYRGAKRLGWAAVTALALGGGGIWSMHFVG
MVAYHIEVPVSFDLRITLLSLVIAVAVSGVGIWVVAADPFNTDRLVRGGIFAGLGIAAMHYTGMAAMRTAGAIDYSPSLV
LISVVIATVAATVAFWIAFRVGGIIRVLSASAVMAGAVCGMHYTAMAATRVTPDPSLYPQVGCDPFTLGILTTFGSTIVL
MFIIVTALGGVTSPEFHVRRIWQDRIFVSSQKP
>Mature_272_residues
GTAANPTVVSLAAAHPHLDASYNLYFVGLSYGLAVLGSFAALASATRIREYRGAKRLGWAAVTALALGGGGIWSMHFVGM
VAYHIEVPVSFDLRITLLSLVIAVAVSGVGIWVVAADPFNTDRLVRGGIFAGLGIAAMHYTGMAAMRTAGAIDYSPSLVL
ISVVIATVAATVAFWIAFRVGGIIRVLSASAVMAGAVCGMHYTAMAATRVTPDPSLYPQVGCDPFTLGILTTFGSTIVLM
FIIVTALGGVTSPEFHVRRIWQDRIFVSSQKP

Specific function: Unknown

COG id: COG3300

COG function: function code T; MHYT domain (predicted integral membrane sensor domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 28594; Mature: 28463

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50924 MHYT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAANPTVVSLAAAHPHLDASYNLYFVGLSYGLAVLGSFAALASATRIREYRGAKRLGW
CCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAVTALALGGGGIWSMHFVGMVAYHIEVPVSFDLRITLLSLVIAVAVSGVGIWVVAADPF
HHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
NTDRLVRGGIFAGLGIAAMHYTGMAAMRTAGAIDYSPSLVLISVVIATVAATVAFWIAFR
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGGIIRVLSASAVMAGAVCGMHYTAMAATRVTPDPSLYPQVGCDPFTLGILTTFGSTIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MFIIVTALGGVTSPEFHVRRIWQDRIFVSSQKP
HHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
GTAANPTVVSLAAAHPHLDASYNLYFVGLSYGLAVLGSFAALASATRIREYRGAKRLGW
CCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAVTALALGGGGIWSMHFVGMVAYHIEVPVSFDLRITLLSLVIAVAVSGVGIWVVAADPF
HHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
NTDRLVRGGIFAGLGIAAMHYTGMAAMRTAGAIDYSPSLVLISVVIATVAATVAFWIAFR
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGGIIRVLSASAVMAGAVCGMHYTAMAATRVTPDPSLYPQVGCDPFTLGILTTFGSTIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MFIIVTALGGVTSPEFHVRRIWQDRIFVSSQKP
HHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]