| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316136
Identifier: 158316136
GI number: 158316136
Start: 5198276
End: 5199241
Strand: Reverse
Name: 158316136
Synonym: Franean1_4354
Alternate gene names: NA
Gene position: 5199241-5198276 (Counterclockwise)
Preceding gene: 158316138
Following gene: 158316127
Centisome position: 57.88
GC content: 70.91
Gene sequence:
>966_bases ATGCCCCTGCATGTGATCACCGGTGCCGGTGGCACCGGAGCCCCCACCGCCGAACTGTTGGCCCGGCAGGGTGATCGCGT CCGGCTGGTCAGCCGGCGCGGGGGCGGACCCGAGCACCCACTGATCGAGCGGATCGCCGCCGACGCGACCGACGCCGACG CGCTGACCCGACTCGCCGAGGGCGCGACGACGCTGATCAACACCGCGATGCCGCCGTACGACCGGTGGCCGGACGAGTTC CCACCGCTCGCGACGGCGCTGCTGGACGCGGCTGAACGCACCGGCGCCGGCTACGTGATGATGGGCAACACCTACGGCTA CGGCATCGTCAACGGCCGCTTCACCGAAGATCTACCGATGGCACCGGTATCCGCCAAAGGTCAGGTACGGGCCCGGATGT GGAGCGATGCCCTCGAGGCGCACCGCGCGGGTCGAGCCCGCGTGACCGAGGTCCGGGCCTCGGCGTTTCTGGGCGCCGGG GCCGGTTCGCTGTACAACTTCACGGTGGCGCCCCTCGTCCTGCGCGGCGAGCCGGCAGCCTTCCCCGGCGACCTGGACGC CCCGAAAACCTGGTCCTACGTCGGGGACGCCGCCCGAACCCTGGCCGCCGTAGCCCTCTCCGGCGACGACCTTGCGTGGG GACGGGCGTGGCACGTGCCCTCCACCGCGGCACTGTCCGTGCGGGAGCTGACCACGCGGCTCGCGACCGCCGCCGGGGCG CCCGCACCCATCCTGACGGCGATGTCCACCGATCAGCTCGCCGCGACCGGAGCCGTGAACCCGATCATGCGGGAAGTCAT CGAGATGATGTACTCCCTGGAACAGCCCGACCTGCTCGACTCCACCCTCACCGAGCAGACGTTCCGCCTCGCCCCGACCC CCCTCGAGACCGTCCTGGCTGAAACCGTCAGCGCCTACGGACCTGTACCTGACCTGACGGTCAGCAGGATTCCGTGTTGG AGCTGA
Upstream 100 bases:
>100_bases ATATGTGGCATTCAGGCCACTACCGTATGTTTCCGGCGGGCGGCAGGGTGAGACAGGTACCCGCGAACCGCGCGGGCCCG CCGAGCGGAAGACGAACACC
Downstream 100 bases:
>100_bases CCGTCTGTCTCAGTGAACGGGCTATGACGGCGGAGCCGCTCGCGGCGCAGAACAACATCATCGCGAGCCAGGCGGTGGTG CCGGGGTCGGACCACTCGAC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MPLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAEGATTLINTAMPPYDRWPDEF PPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPMAPVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAG AGSLYNFTVAPLVLRGEPAAFPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLAETVSAYGPVPDLTVSRIPCW S
Sequences:
>Translated_321_residues MPLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAEGATTLINTAMPPYDRWPDEF PPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPMAPVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAG AGSLYNFTVAPLVLRGEPAAFPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLAETVSAYGPVPDLTVSRIPCW S >Mature_320_residues PLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAEGATTLINTAMPPYDRWPDEFP PLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPMAPVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAGA GSLYNFTVAPLVLRGEPAAFPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGAP APILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLAETVSAYGPVPDLTVSRIPCWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33850; Mature: 33719
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAE CCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHH GATTLINTAMPPYDRWPDEFPPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPM HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCC APVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAGAGSLYNFTVAPLVLRGEPAA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC FPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA CCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCC PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLA CCCEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH ETVSAYGPVPDLTVSRIPCWS HHHHHCCCCCCCEECCCCCCC >Mature Secondary Structure PLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAE CEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHH GATTLINTAMPPYDRWPDEFPPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPM HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCC APVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAGAGSLYNFTVAPLVLRGEPAA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC FPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA CCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCC PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLA CCCEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH ETVSAYGPVPDLTVSRIPCWS HHHHHCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA