| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316126
Identifier: 158316126
GI number: 158316126
Start: 5186782
End: 5187351
Strand: Reverse
Name: 158316126
Synonym: Franean1_4344
Alternate gene names: NA
Gene position: 5187351-5186782 (Counterclockwise)
Preceding gene: 158316127
Following gene: 158316125
Centisome position: 57.75
GC content: 68.95
Gene sequence:
>570_bases ATGACGACGGCCAGTGAACGGGCTCGACCGGCGACGGGCGGTATCGGGATCGCCGGCGTGTTGCTCGTCGGCGCCGCGGT AGCCGTCTCACTCGGGGTGTACGCAAAGACGCACGATCCGGCCGGCCGGCCGTTGTACACGCTCGGTTTCTCCGGCCCGC TGCCGATGAAAGCCTGGTTCACCACGGCCGCCGCGCTGCTGCTCGTGGTGCAACTGACCACGGCACTGTGGATGTGGGGC CGACTGCCCGGTGCCGGGTCGGCTCCGGCGTGGGCGGCGATCCTGCACCGGTGGAGCGGTAGCACGGCGTTCATCTTCAC GTTGCCGGTGGCGTTTCACTGCATCTGGTCACTCGGTTTCGCCACGGCGGACTCGCGGGTGTTCCTGCACAGCCTCGCCG GATGCACGTTCTACGGCGCCTACGCGGCGAAGATGATCGGCCTGCGAACGAAAGGGCTGCCCGGATGGGCACTGCCGGTG CTCGGCTCCGCCGTGCTCACCGCCCTCGTCGTGCTGTGGCTGACGGCGTCCCTGTGGTTCTTCACGCGCTCGGGCATCCC GCACGTCTAG
Upstream 100 bases:
>100_bases CGATGTTTTCGCGCTGCCCCGGCACGACAGGTTTGTCCTGGTTCCCACGGCACCGTGGGAACCAGGACCGTGTGAATCAG GGCGTCAATGGAGGCTGATC
Downstream 100 bases:
>100_bases CCGAGCCATCTCGATCAGCCGAGTCATCTCGATCATCGTTCGGCGTTCAGGTAGGTCGTCGGACAACCGAACACGGAGGG CACCATGTCAGAAGCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTTASERARPATGGIGIAGVLLVGAAVAVSLGVYAKTHDPAGRPLYTLGFSGPLPMKAWFTTAAALLLVVQLTTALWMWG RLPGAGSAPAWAAILHRWSGSTAFIFTLPVAFHCIWSLGFATADSRVFLHSLAGCTFYGAYAAKMIGLRTKGLPGWALPV LGSAVLTALVVLWLTASLWFFTRSGIPHV
Sequences:
>Translated_189_residues MTTASERARPATGGIGIAGVLLVGAAVAVSLGVYAKTHDPAGRPLYTLGFSGPLPMKAWFTTAAALLLVVQLTTALWMWG RLPGAGSAPAWAAILHRWSGSTAFIFTLPVAFHCIWSLGFATADSRVFLHSLAGCTFYGAYAAKMIGLRTKGLPGWALPV LGSAVLTALVVLWLTASLWFFTRSGIPHV >Mature_188_residues TTASERARPATGGIGIAGVLLVGAAVAVSLGVYAKTHDPAGRPLYTLGFSGPLPMKAWFTTAAALLLVVQLTTALWMWGR LPGAGSAPAWAAILHRWSGSTAFIFTLPVAFHCIWSLGFATADSRVFLHSLAGCTFYGAYAAKMIGLRTKGLPGWALPVL GSAVLTALVVLWLTASLWFFTRSGIPHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19841; Mature: 19709
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTASERARPATGGIGIAGVLLVGAAVAVSLGVYAKTHDPAGRPLYTLGFSGPLPMKAWF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCHHHHH TTAAALLLVVQLTTALWMWGRLPGAGSAPAWAAILHRWSGSTAFIFTLPVAFHCIWSLGF HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH ATADSRVFLHSLAGCTFYGAYAAKMIGLRTKGLPGWALPVLGSAVLTALVVLWLTASLWF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FTRSGIPHV HHCCCCCCC >Mature Secondary Structure TTASERARPATGGIGIAGVLLVGAAVAVSLGVYAKTHDPAGRPLYTLGFSGPLPMKAWF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCHHHHH TTAAALLLVVQLTTALWMWGRLPGAGSAPAWAAILHRWSGSTAFIFTLPVAFHCIWSLGF HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH ATADSRVFLHSLAGCTFYGAYAAKMIGLRTKGLPGWALPVLGSAVLTALVVLWLTASLWF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FTRSGIPHV HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA