Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316061

Identifier: 158316061

GI number: 158316061

Start: 5117650

End: 5118315

Strand: Reverse

Name: 158316061

Synonym: Franean1_4279

Alternate gene names: NA

Gene position: 5118315-5117650 (Counterclockwise)

Preceding gene: 158316062

Following gene: 158316058

Centisome position: 56.98

GC content: 70.87

Gene sequence:

>666_bases
GTGGTCGTCACCCCCGACGGCGTGATGGTCGCCACCGAACGCGACAACAACGGCAGCACCAGCCTGCCGAAGATCGCCCG
GTTCGACGTGTCCTCCACGGCCACCGCGCTCAACGCGACCGCGGAGTGGGACCTCACCTCCGACCTGCCCGCGGTGGCGG
CCAACAGCGGCCCCGAGGGCATCGCGTGGATCCCCGACTCGTTCCTCACCGCGCACGGCTTCCGGGACGAGCACACCAGC
GCCGCGTACAACCCGGCCTCCTACCCCGGCCACGGCAGCGGCCTGTACTTCGTCGGCCTGGAGGCCAACGGCACGATCTA
CGCCTACGCCCTCGACCAGACCGGTGGCGGTTACACCCGGATCGCCACCGCGCCGAGCGGCTTCGCGGGCGTGATGGACC
TCGAGTACGAGCCCAGCACCGGCCACCTGTGGGCGGCCTGCGACGACACCTGCCAGGGCCGCACCGCGACGCTCGACGTC
AACGCCCAGGGCCAGCTCGCCGTCACGGCCGTCTACGAGCGGCCCACCGGAATGGCGAACTACAACAACGAGGGATTCGC
CATCGCGCCGCAGGAGACCTGCGCGTCCGGGCTGAAGCCGGTCCTGTGGTCCGACGATGCCAACGACGCCAGCCACGCGC
TGCGTGCCGGAACGCTCAACTGCTGA

Upstream 100 bases:

>100_bases
CCCAGCGGCGTGACGTGGGGTTCCCGACACCTCCGGCGGCTGGACGTCCGGTAAGGCGCTGCACTACGCCAACGGGACCG
GCGACCTCGACGCGGAAGGC

Downstream 100 bases:

>100_bases
GGTCCCACGCAATGCTGAGGTCCTAAGCACTGCTGACATCCTGGGCCCCGGTGGCCGGGCGGTGGCCGGGCGGTGGCCGG
GCGGTGGCCGGGCGGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEGIAWIPDSFLTAHGFRDEHTS
AAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTRIATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDV
NAQGQLAVTAVYERPTGMANYNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC

Sequences:

>Translated_221_residues
MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEGIAWIPDSFLTAHGFRDEHTS
AAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTRIATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDV
NAQGQLAVTAVYERPTGMANYNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC
>Mature_221_residues
MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEGIAWIPDSFLTAHGFRDEHTS
AAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTRIATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDV
NAQGQLAVTAVYERPTGMANYNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23060; Mature: 23060

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEG
CEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECEECCCCCCCCCEEECCCCCCC
IAWIPDSFLTAHGFRDEHTSAAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTR
EEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEE
IATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDVNAQGQLAVTAVYERPTGMAN
EEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC
YNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC
CCCCCEEECCHHHHHHCCCCEEECCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEG
CEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECEECCCCCCCCCEEECCCCCCC
IAWIPDSFLTAHGFRDEHTSAAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTR
EEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEE
IATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDVNAQGQLAVTAVYERPTGMAN
EEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC
YNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC
CCCCCEEECCHHHHHHCCCCEEECCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA