| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316061
Identifier: 158316061
GI number: 158316061
Start: 5117650
End: 5118315
Strand: Reverse
Name: 158316061
Synonym: Franean1_4279
Alternate gene names: NA
Gene position: 5118315-5117650 (Counterclockwise)
Preceding gene: 158316062
Following gene: 158316058
Centisome position: 56.98
GC content: 70.87
Gene sequence:
>666_bases GTGGTCGTCACCCCCGACGGCGTGATGGTCGCCACCGAACGCGACAACAACGGCAGCACCAGCCTGCCGAAGATCGCCCG GTTCGACGTGTCCTCCACGGCCACCGCGCTCAACGCGACCGCGGAGTGGGACCTCACCTCCGACCTGCCCGCGGTGGCGG CCAACAGCGGCCCCGAGGGCATCGCGTGGATCCCCGACTCGTTCCTCACCGCGCACGGCTTCCGGGACGAGCACACCAGC GCCGCGTACAACCCGGCCTCCTACCCCGGCCACGGCAGCGGCCTGTACTTCGTCGGCCTGGAGGCCAACGGCACGATCTA CGCCTACGCCCTCGACCAGACCGGTGGCGGTTACACCCGGATCGCCACCGCGCCGAGCGGCTTCGCGGGCGTGATGGACC TCGAGTACGAGCCCAGCACCGGCCACCTGTGGGCGGCCTGCGACGACACCTGCCAGGGCCGCACCGCGACGCTCGACGTC AACGCCCAGGGCCAGCTCGCCGTCACGGCCGTCTACGAGCGGCCCACCGGAATGGCGAACTACAACAACGAGGGATTCGC CATCGCGCCGCAGGAGACCTGCGCGTCCGGGCTGAAGCCGGTCCTGTGGTCCGACGATGCCAACGACGCCAGCCACGCGC TGCGTGCCGGAACGCTCAACTGCTGA
Upstream 100 bases:
>100_bases CCCAGCGGCGTGACGTGGGGTTCCCGACACCTCCGGCGGCTGGACGTCCGGTAAGGCGCTGCACTACGCCAACGGGACCG GCGACCTCGACGCGGAAGGC
Downstream 100 bases:
>100_bases GGTCCCACGCAATGCTGAGGTCCTAAGCACTGCTGACATCCTGGGCCCCGGTGGCCGGGCGGTGGCCGGGCGGTGGCCGG GCGGTGGCCGGGCGGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEGIAWIPDSFLTAHGFRDEHTS AAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTRIATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDV NAQGQLAVTAVYERPTGMANYNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC
Sequences:
>Translated_221_residues MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEGIAWIPDSFLTAHGFRDEHTS AAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTRIATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDV NAQGQLAVTAVYERPTGMANYNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC >Mature_221_residues MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEGIAWIPDSFLTAHGFRDEHTS AAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTRIATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDV NAQGQLAVTAVYERPTGMANYNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23060; Mature: 23060
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEG CEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECEECCCCCCCCCEEECCCCCCC IAWIPDSFLTAHGFRDEHTSAAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTR EEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEE IATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDVNAQGQLAVTAVYERPTGMAN EEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC YNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC CCCCCEEECCHHHHHHCCCCEEECCCCCCHHHHHCCCCCCC >Mature Secondary Structure MVVTPDGVMVATERDNNGSTSLPKIARFDVSSTATALNATAEWDLTSDLPAVAANSGPEG CEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEECEECCCCCCCCCEEECCCCCCC IAWIPDSFLTAHGFRDEHTSAAYNPASYPGHGSGLYFVGLEANGTIYAYALDQTGGGYTR EEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEE IATAPSGFAGVMDLEYEPSTGHLWAACDDTCQGRTATLDVNAQGQLAVTAVYERPTGMAN EEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC YNNEGFAIAPQETCASGLKPVLWSDDANDASHALRAGTLNC CCCCCEEECCHHHHHHCCCCEEECCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA