Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316016

Identifier: 158316016

GI number: 158316016

Start: 5041925

End: 5043133

Strand: Reverse

Name: 158316016

Synonym: Franean1_4234

Alternate gene names: NA

Gene position: 5043133-5041925 (Counterclockwise)

Preceding gene: 158316017

Following gene: 158316015

Centisome position: 56.15

GC content: 74.52

Gene sequence:

>1209_bases
GTGACCAGCCGGCTGACCGACCTCGTCGTCTACCGGTTGGGCGGGAACGTCCTGCTGCACGGCGGGGACCTCTACTCGGC
GGTGGAACCCGCCTCGGGGCTGCCGTTCACCTACACACCCTTCGCGGCGGCGGTGTTCACGCCGCTCGCACTGCCGCCGC
GGCCGGTCGCGCAACTGGTCTGGACGCTGCTCCTGTTGGTCTCGCTGTACTTCTTCTGCGCCACCTCGCTGGCGGCGACC
CGGCCGTCCCCGGCCGGCCGCTGGCCCGGGGTCCGCGCCGTCGGCCCGGTCGTCGGCCTGGCGATGCTGGCCGAGCCGAT
CCGGCGGAACTTCGACCTGGGCCAGATCAACATCGCGCTGGGGCTGCTCGTCGCGCTGGACCTGTTCGGCCGGCGCGGGC
CGCTGCCGCGGGGTGTGCTCATCGGGATCGCCGCCGGGATCAAGCTCACCCCACTGATCTTCGTGCCGCATCTGCTTCTC
ACCGGCCGCCACCGCGCCGCCCTGACCGCGGTGGCGACGTTCGGCGTGACGATCGGCGTCGGCTTCGCGGCGAGCCCCGG
CTCGTCGGCGACGTACTGGTCCGAGACGTTCCTCGACACCGGCCACGTGGGTGGCGTCCCGTTTGCCGGCAACCAGTCAC
TGCTCGGCGTCCTGGCCCGCCTCATGTCCGGCGCGGACAACGCGCGCCCGCTCTATCTCCCGCTGGCCGCGGTGGTCGCC
GCCGTCGGTCTGGCGACGGCGGCGCGGCTGTTCCGCTCGGGTGCGCGGCTGCCCGGGGACGTCACCTGCGCTCTGACCGG
CCTGCTGGTGTCGCCGATCTCGTGGAGCCATCACTGGGTGTGGGCGGTCCCCGCGCTTCTCTGGATGTTCGCGGCCCCCG
GTCGGCCGCGGTGGGGACGGGGCGCCGCGGTGGCCGGCTACGGGCTGCTCATGGCCGCTCCGATCTGGTGGGTCCCGAAC
ACGGGCGACGCCGAGTTCTCCCACCACGGCTGGCAGCTGCTGGCCGGGAACTGCTACTTTCTCGCCGCGCTGCTCCTTCT
CGGGGCGCTGGCGGCGTGGGCGCCGACGGGGGCCCGCGGCGGGTCGCGGGCCCCCGTGCCACGGCTGCCCGACCAGCGGA
TCGTCGGGCGGGGTGTGCCCGGGCCGCGGGCCCCTGACCCGCGGCGGCGATCAGGAGATGTGGCCGGCGCCCTTCCCGGA
GGCGAGTAG

Upstream 100 bases:

>100_bases
CTTGAACCTGGCGCCACAACCGCGGCGCCTTCAGGCTGCCGCTCGAACAACGGGAACCGCCACCGGGCTCGGTTTCGCGG
TTCTTTTCCTCACCTTCGCG

Downstream 100 bases:

>100_bases
CCACAGCAGGTACGGCGCCCCCACGACGGCGGTCCCGACGCCTACGGGCCGCGCGTCGCGCACGCTGGAACGGGTCAGCC
CGTACGACACGACGCTGGTC

Product: sugar transporter superfamily protein

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-2)-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; PPM-dependent mannosyltransferase; Polyprenol-phosphate-mannose alpha-mannosyltransferase; PPM alpha-mannosyltransferase [H]

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLVWTLLLLVSLYFFCATSLAAT
RPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIALGLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLL
TGRHRAALTAVATFGVTIGVGFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA
AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGRGAAVAGYGLLMAAPIWWVPN
TGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARGGSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPG
GE

Sequences:

>Translated_402_residues
MTSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLVWTLLLLVSLYFFCATSLAAT
RPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIALGLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLL
TGRHRAALTAVATFGVTIGVGFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA
AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGRGAAVAGYGLLMAAPIWWVPN
TGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARGGSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPG
GE
>Mature_401_residues
TSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLVWTLLLLVSLYFFCATSLAATR
PSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIALGLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLLT
GRHRAALTAVATFGVTIGVGFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVAA
VGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGRGAAVAGYGLLMAAPIWWVPNT
GDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARGGSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPGG
E

Specific function: Responsible for the addition of alpha-(1-2) mannose branches to the linear mannan core on the biosynthetic pathway to mature Lipoarabinomannan (LAM) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018584 [H]

Pfam domain/function: PF09594 DUF2029 [H]

EC number: NA

Molecular weight: Translated: 41937; Mature: 41805

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: PS00139 THIOL_PROTEASE_CYS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLV
CCCHHHHHHHHEECCCEEEECCCHHHHCCCCCCCCEEECHHHHHHHHHCCCCCCHHHHHH
WTLLLLVSLYFFCATSLAATRPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLLTGRHRAALTAVATFGVTIGV
HHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
GFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GAAVAGYGLLMAAPIWWVPNTGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARG
CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC
GSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPGGE
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLV
CCHHHHHHHHEECCCEEEECCCHHHHCCCCCCCCEEECHHHHHHHHHCCCCCCHHHHHH
WTLLLLVSLYFFCATSLAATRPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLLTGRHRAALTAVATFGVTIGV
HHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
GFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GAAVAGYGLLMAAPIWWVPNTGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARG
CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC
GSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPGGE
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]