| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316016
Identifier: 158316016
GI number: 158316016
Start: 5041925
End: 5043133
Strand: Reverse
Name: 158316016
Synonym: Franean1_4234
Alternate gene names: NA
Gene position: 5043133-5041925 (Counterclockwise)
Preceding gene: 158316017
Following gene: 158316015
Centisome position: 56.15
GC content: 74.52
Gene sequence:
>1209_bases GTGACCAGCCGGCTGACCGACCTCGTCGTCTACCGGTTGGGCGGGAACGTCCTGCTGCACGGCGGGGACCTCTACTCGGC GGTGGAACCCGCCTCGGGGCTGCCGTTCACCTACACACCCTTCGCGGCGGCGGTGTTCACGCCGCTCGCACTGCCGCCGC GGCCGGTCGCGCAACTGGTCTGGACGCTGCTCCTGTTGGTCTCGCTGTACTTCTTCTGCGCCACCTCGCTGGCGGCGACC CGGCCGTCCCCGGCCGGCCGCTGGCCCGGGGTCCGCGCCGTCGGCCCGGTCGTCGGCCTGGCGATGCTGGCCGAGCCGAT CCGGCGGAACTTCGACCTGGGCCAGATCAACATCGCGCTGGGGCTGCTCGTCGCGCTGGACCTGTTCGGCCGGCGCGGGC CGCTGCCGCGGGGTGTGCTCATCGGGATCGCCGCCGGGATCAAGCTCACCCCACTGATCTTCGTGCCGCATCTGCTTCTC ACCGGCCGCCACCGCGCCGCCCTGACCGCGGTGGCGACGTTCGGCGTGACGATCGGCGTCGGCTTCGCGGCGAGCCCCGG CTCGTCGGCGACGTACTGGTCCGAGACGTTCCTCGACACCGGCCACGTGGGTGGCGTCCCGTTTGCCGGCAACCAGTCAC TGCTCGGCGTCCTGGCCCGCCTCATGTCCGGCGCGGACAACGCGCGCCCGCTCTATCTCCCGCTGGCCGCGGTGGTCGCC GCCGTCGGTCTGGCGACGGCGGCGCGGCTGTTCCGCTCGGGTGCGCGGCTGCCCGGGGACGTCACCTGCGCTCTGACCGG CCTGCTGGTGTCGCCGATCTCGTGGAGCCATCACTGGGTGTGGGCGGTCCCCGCGCTTCTCTGGATGTTCGCGGCCCCCG GTCGGCCGCGGTGGGGACGGGGCGCCGCGGTGGCCGGCTACGGGCTGCTCATGGCCGCTCCGATCTGGTGGGTCCCGAAC ACGGGCGACGCCGAGTTCTCCCACCACGGCTGGCAGCTGCTGGCCGGGAACTGCTACTTTCTCGCCGCGCTGCTCCTTCT CGGGGCGCTGGCGGCGTGGGCGCCGACGGGGGCCCGCGGCGGGTCGCGGGCCCCCGTGCCACGGCTGCCCGACCAGCGGA TCGTCGGGCGGGGTGTGCCCGGGCCGCGGGCCCCTGACCCGCGGCGGCGATCAGGAGATGTGGCCGGCGCCCTTCCCGGA GGCGAGTAG
Upstream 100 bases:
>100_bases CTTGAACCTGGCGCCACAACCGCGGCGCCTTCAGGCTGCCGCTCGAACAACGGGAACCGCCACCGGGCTCGGTTTCGCGG TTCTTTTCCTCACCTTCGCG
Downstream 100 bases:
>100_bases CCACAGCAGGTACGGCGCCCCCACGACGGCGGTCCCGACGCCTACGGGCCGCGCGTCGCGCACGCTGGAACGGGTCAGCC CGTACGACACGACGCTGGTC
Product: sugar transporter superfamily protein
Products: NA
Alternate protein names: Alpha-D-mannose-alpha-(1-2)-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; PPM-dependent mannosyltransferase; Polyprenol-phosphate-mannose alpha-mannosyltransferase; PPM alpha-mannosyltransferase [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLVWTLLLLVSLYFFCATSLAAT RPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIALGLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLL TGRHRAALTAVATFGVTIGVGFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGRGAAVAGYGLLMAAPIWWVPN TGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARGGSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPG GE
Sequences:
>Translated_402_residues MTSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLVWTLLLLVSLYFFCATSLAAT RPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIALGLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLL TGRHRAALTAVATFGVTIGVGFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGRGAAVAGYGLLMAAPIWWVPN TGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARGGSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPG GE >Mature_401_residues TSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLVWTLLLLVSLYFFCATSLAATR PSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIALGLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLLT GRHRAALTAVATFGVTIGVGFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVAA VGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGRGAAVAGYGLLMAAPIWWVPNT GDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARGGSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPGG E
Specific function: Responsible for the addition of alpha-(1-2) mannose branches to the linear mannan core on the biosynthetic pathway to mature Lipoarabinomannan (LAM) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018584 [H]
Pfam domain/function: PF09594 DUF2029 [H]
EC number: NA
Molecular weight: Translated: 41937; Mature: 41805
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: PS00139 THIOL_PROTEASE_CYS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLV CCCHHHHHHHHEECCCEEEECCCHHHHCCCCCCCCEEECHHHHHHHHHCCCCCCHHHHHH WTLLLLVSLYFFCATSLAATRPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLLTGRHRAALTAVATFGVTIGV HHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC GFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC GAAVAGYGLLMAAPIWWVPNTGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARG CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC GSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPGGE CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSRLTDLVVYRLGGNVLLHGGDLYSAVEPASGLPFTYTPFAAAVFTPLALPPRPVAQLV CCHHHHHHHHEECCCEEEECCCHHHHCCCCCCCCEEECHHHHHHHHHCCCCCCHHHHHH WTLLLLVSLYFFCATSLAATRPSPAGRWPGVRAVGPVVGLAMLAEPIRRNFDLGQINIAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLLVALDLFGRRGPLPRGVLIGIAAGIKLTPLIFVPHLLLTGRHRAALTAVATFGVTIGV HHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC GFAASPGSSATYWSETFLDTGHVGGVPFAGNQSLLGVLARLMSGADNARPLYLPLAAVVA CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHH AVGLATAARLFRSGARLPGDVTCALTGLLVSPISWSHHWVWAVPALLWMFAAPGRPRWGR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC GAAVAGYGLLMAAPIWWVPNTGDAEFSHHGWQLLAGNCYFLAALLLLGALAAWAPTGARG CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC GSRAPVPRLPDQRIVGRGVPGPRAPDPRRRSGDVAGALPGGE CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]