Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316012

Identifier: 158316012

GI number: 158316012

Start: 5037172

End: 5038443

Strand: Reverse

Name: 158316012

Synonym: Franean1_4230

Alternate gene names: NA

Gene position: 5038443-5037172 (Counterclockwise)

Preceding gene: 158316013

Following gene: 158316011

Centisome position: 56.09

GC content: 68.55

Gene sequence:

>1272_bases
GTGGCCGTGAAAGTGCTCCGCGTCGAGGGCATGCGTGAGGACACCCGCAGTCCCGAGGAGAGAACAGCTCTGGAGTCGGC
CGAGCGGCGTCCGGTCGACATGAGCGTCGACCGCGTTCTCCGGATCGCGAGAACCCAGACCGGCCTGGACGACTTCGGGC
CCATGGACTTCACCGAACGGCTCGGCCGGTTGCTGGCCGAGGTGGCGGCCGACGACAACGTGTGGCGGGCCCACAAGGCG
ATCTTCGTCGACCACTGTGTCAAGGCCGCGGTCAACCGCCTGCTCATCCAGGACTACTGGACGCGCCACCCCGATGCGCT
CGACGTGCGGATCACGCGGCCGATCAACGTCGTCGCGCTGCCCCGCTCGGGCAGCACCCACCTGGAGAACCTGGTCGCCG
CGGACCGCAGGCTCCGTCACCTTCCGGTCTACCTGGCGGCCCAACCCGCACCGCGACCGACCGAGACATCCGAGCCTGGC
GCCCCGGACCCCCGCTGGGCCCGTTCTGAGGCGCGATGGCGCAACGTCAGCAAGAACGAGATCATGGCCGCGATGCACGA
GCACTCGCCCGACCACGCGTGCGGCGAGAACGAGCTGCAGCTCCCCGACTTCGCCAGCTACCAGTGGGAGTGGCTGGCCC
AGGTGCCCGGTTTCCGTGACCACTACCTGAGCCACGACCAGACACCGCACTACCGGTACATGCGCGACGTGCTGAAGACC
ATCGCGCACCAGTTCCCGGACGAGCGGCGCTGGATGGTCAAGTCGAACCAGCACAGCGAGCAGCTGGTCCCGCTGCTGGC
CGTCTACCCGGACGTCACGGTCGTGATGATCCACCGGGATCCCGTGGCGACGTTGCAGTCCCTGCTCACCATGCGCGGCC
TCGCGCTCAAGAACAGCCAGAAGCAGCCGGACATCGACGCGCACGTCGAGTACTGGGTGAACCGCGTCGAGCAGATGCTG
CGTAGATATATGCGCGACCGGGAGCTGGTACCGAACGGGCAGCTCGTCGAGCTGCAGTTCGCCGACATCATCGCCGACGA
CGTCCGGTCCGCGACGCACGTGCTCGAGCGGGCCGGCCTGCCGGTGACCGACGAGAGCGTCGCCGACATCCGCGCCTACA
TAGCCTCCCACCCGCGCGGAAAGCGCGGCCGAGTGGTCTACGACCTGGAAGGCGACTTCGGTCTCGCCGCGGACGAGCTG
CGGGAACGGTTCGCCTTCTACACCGACGCCTTCGCCGTCGCGGCCGAGGCGGGAAAGGGCGGCGCCCGGTGA

Upstream 100 bases:

>100_bases
TCATGAGCGACTGGTCGCGTTTCCACACGGGCGATCTCGTGGTCGTCGACGGCGGGTGGATGGCGAACGCCGGCAAGACC
AACATCGGGGAGCTTCCGCA

Downstream 100 bases:

>100_bases
AACAGCCCCTGAACGCCCTCATCGTCAAGGAGGGGGAGGGCCAGCAGGACGCCGTCCCCGTCAACGACCACATCTTCACC
TCGAAGGGCATCTCCAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MAVKVLRVEGMREDTRSPEERTALESAERRPVDMSVDRVLRIARTQTGLDDFGPMDFTERLGRLLAEVAADDNVWRAHKA
IFVDHCVKAAVNRLLIQDYWTRHPDALDVRITRPINVVALPRSGSTHLENLVAADRRLRHLPVYLAAQPAPRPTETSEPG
APDPRWARSEARWRNVSKNEIMAAMHEHSPDHACGENELQLPDFASYQWEWLAQVPGFRDHYLSHDQTPHYRYMRDVLKT
IAHQFPDERRWMVKSNQHSEQLVPLLAVYPDVTVVMIHRDPVATLQSLLTMRGLALKNSQKQPDIDAHVEYWVNRVEQML
RRYMRDRELVPNGQLVELQFADIIADDVRSATHVLERAGLPVTDESVADIRAYIASHPRGKRGRVVYDLEGDFGLAADEL
RERFAFYTDAFAVAAEAGKGGAR

Sequences:

>Translated_423_residues
MAVKVLRVEGMREDTRSPEERTALESAERRPVDMSVDRVLRIARTQTGLDDFGPMDFTERLGRLLAEVAADDNVWRAHKA
IFVDHCVKAAVNRLLIQDYWTRHPDALDVRITRPINVVALPRSGSTHLENLVAADRRLRHLPVYLAAQPAPRPTETSEPG
APDPRWARSEARWRNVSKNEIMAAMHEHSPDHACGENELQLPDFASYQWEWLAQVPGFRDHYLSHDQTPHYRYMRDVLKT
IAHQFPDERRWMVKSNQHSEQLVPLLAVYPDVTVVMIHRDPVATLQSLLTMRGLALKNSQKQPDIDAHVEYWVNRVEQML
RRYMRDRELVPNGQLVELQFADIIADDVRSATHVLERAGLPVTDESVADIRAYIASHPRGKRGRVVYDLEGDFGLAADEL
RERFAFYTDAFAVAAEAGKGGAR
>Mature_422_residues
AVKVLRVEGMREDTRSPEERTALESAERRPVDMSVDRVLRIARTQTGLDDFGPMDFTERLGRLLAEVAADDNVWRAHKAI
FVDHCVKAAVNRLLIQDYWTRHPDALDVRITRPINVVALPRSGSTHLENLVAADRRLRHLPVYLAAQPAPRPTETSEPGA
PDPRWARSEARWRNVSKNEIMAAMHEHSPDHACGENELQLPDFASYQWEWLAQVPGFRDHYLSHDQTPHYRYMRDVLKTI
AHQFPDERRWMVKSNQHSEQLVPLLAVYPDVTVVMIHRDPVATLQSLLTMRGLALKNSQKQPDIDAHVEYWVNRVEQMLR
RYMRDRELVPNGQLVELQFADIIADDVRSATHVLERAGLPVTDESVADIRAYIASHPRGKRGRVVYDLEGDFGLAADELR
ERFAFYTDAFAVAAEAGKGGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48347; Mature: 48216

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKVLRVEGMREDTRSPEERTALESAERRPVDMSVDRVLRIARTQTGLDDFGPMDFTER
CCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH
LGRLLAEVAADDNVWRAHKAIFVDHCVKAAVNRLLIQDYWTRHPDALDVRITRPINVVAL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEE
PRSGSTHLENLVAADRRLRHLPVYLAAQPAPRPTETSEPGAPDPRWARSEARWRNVSKNE
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH
IMAAMHEHSPDHACGENELQLPDFASYQWEWLAQVPGFRDHYLSHDQTPHYRYMRDVLKT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHH
IAHQFPDERRWMVKSNQHSEQLVPLLAVYPDVTVVMIHRDPVATLQSLLTMRGLALKNSQ
HHHHCCCCCEEHCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC
KQPDIDAHVEYWVNRVEQMLRRYMRDRELVPNGQLVELQFADIIADDVRSATHVLERAGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC
PVTDESVADIRAYIASHPRGKRGRVVYDLEGDFGLAADELRERFAFYTDAFAVAAEAGKG
CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GAR
CCC
>Mature Secondary Structure 
AVKVLRVEGMREDTRSPEERTALESAERRPVDMSVDRVLRIARTQTGLDDFGPMDFTER
CEEEEEECCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH
LGRLLAEVAADDNVWRAHKAIFVDHCVKAAVNRLLIQDYWTRHPDALDVRITRPINVVAL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEE
PRSGSTHLENLVAADRRLRHLPVYLAAQPAPRPTETSEPGAPDPRWARSEARWRNVSKNE
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH
IMAAMHEHSPDHACGENELQLPDFASYQWEWLAQVPGFRDHYLSHDQTPHYRYMRDVLKT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHH
IAHQFPDERRWMVKSNQHSEQLVPLLAVYPDVTVVMIHRDPVATLQSLLTMRGLALKNSQ
HHHHCCCCCEEHCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC
KQPDIDAHVEYWVNRVEQMLRRYMRDRELVPNGQLVELQFADIIADDVRSATHVLERAGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC
PVTDESVADIRAYIASHPRGKRGRVVYDLEGDFGLAADELRERFAFYTDAFAVAAEAGKG
CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GAR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA