| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cysQ [H]
Identifier: 158316006
GI number: 158316006
Start: 5030483
End: 5031196
Strand: Reverse
Name: cysQ [H]
Synonym: Franean1_4224
Alternate gene names: 158316006
Gene position: 5031196-5030483 (Counterclockwise)
Preceding gene: 158316007
Following gene: 158316005
Centisome position: 56.01
GC content: 74.65
Gene sequence:
>714_bases ATGGACGATCACGCACTCGCCGCGGCCCTCGCCGAGCAGGCGGGGTCCCTCCTCCTCGATATCCGCGGGCAGGGTGGGGC CCAGGGGGATCGGCAGTCCAACGAGCTGCTGCTGCGCCTGCTCGCGCAGACACGTCCGGGCGACGCCGTTCTGTCCGAGG AAAGCGCCGACGATCCCGTCCGCCTCACCCGGGGCCGGGTCTGGATCATCGACCCGCTCGACGGGACCCGCGAGTACGGC GAGCCGCCGCGAGACGACTGGGCCGTCCACGTCGCCCTCGCCGTCAACGGGACACCCACCGCGGGGGCGGTCGGACTGCC CGCCGCCGGCCTCGTGCTGCACACCGGCGAACCACCGGCCCTCGCCGCCCCGACCTCCGGCCCGATCCGTCTCGCCGTCT CGCGCACCCGCCCACCCGCCTGCGTCGACCAGCTTGTCGCCCGCCTGGACGCGGCCCTGGTCCCCATGGGTTCCGCCGGC GCCAAGGCGATGGCGGTCGTCCGCGGCGACGTCGACGTCTACGCCCACTCCGGCGGCCAGTACGAATGGGACTCCGCCGC CCCCGTCGCCGTCGCCCACGCCGCGGGCCTGCACACCTCCCGCCTCGACGGCGGACCCCTCCGCTACAACGAGCCCAACC CCTACCTCCCCGACCTGCTCATCTGCCGCCCGGAGCTCGCCGACACCGTCCTGCGAGCACTCCATGACGCCTGA
Upstream 100 bases:
>100_bases CCGCGGCCGCCGCCGACCTGGTCGTCGACCACCTGCGTCAGGCCGGTGTGCTCGCCCCGCCCGCGCCTCGCCCGACCCCG CCCGCCGGAGCATGAACAGC
Downstream 100 bases:
>100_bases CCGGGCCCCCGCAGCTGTCGGTGGCGCGAGGTGGTCTCCTGTATGACGGCCAGCTTCGTGAGCGGCGGTTCCACTGGATC GTCGACTGCGCCGGCCCGCC
Product: inositol monophosphatase
Products: NA
Alternate protein names: PAP phosphatase; 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; D-fructose-1,6-bisphosphate 1-phosphohydrolase; DPNPase; Fructose-1,6-bisphosphatase; FBPase; Inositol-1-monophosphatase; I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MDDHALAAALAEQAGSLLLDIRGQGGAQGDRQSNELLLRLLAQTRPGDAVLSEESADDPVRLTRGRVWIIDPLDGTREYG EPPRDDWAVHVALAVNGTPTAGAVGLPAAGLVLHTGEPPALAAPTSGPIRLAVSRTRPPACVDQLVARLDAALVPMGSAG AKAMAVVRGDVDVYAHSGGQYEWDSAAPVAVAHAAGLHTSRLDGGPLRYNEPNPYLPDLLICRPELADTVLRALHDA
Sequences:
>Translated_237_residues MDDHALAAALAEQAGSLLLDIRGQGGAQGDRQSNELLLRLLAQTRPGDAVLSEESADDPVRLTRGRVWIIDPLDGTREYG EPPRDDWAVHVALAVNGTPTAGAVGLPAAGLVLHTGEPPALAAPTSGPIRLAVSRTRPPACVDQLVARLDAALVPMGSAG AKAMAVVRGDVDVYAHSGGQYEWDSAAPVAVAHAAGLHTSRLDGGPLRYNEPNPYLPDLLICRPELADTVLRALHDA >Mature_237_residues MDDHALAAALAEQAGSLLLDIRGQGGAQGDRQSNELLLRLLAQTRPGDAVLSEESADDPVRLTRGRVWIIDPLDGTREYG EPPRDDWAVHVALAVNGTPTAGAVGLPAAGLVLHTGEPPALAAPTSGPIRLAVSRTRPPACVDQLVARLDAALVPMGSAG AKAMAVVRGDVDVYAHSGGQYEWDSAAPVAVAHAAGLHTSRLDGGPLRYNEPNPYLPDLLICRPELADTVLRALHDA
Specific function: Phosphatase with a broad specificity. Its primary physiological function is to dephosphorylate 3'-phosphoadenosine 5'-phosphate (PAP) and 3'-phosphoadenosine 5'-phosphosulfate (PAPS). Thus, plays a role in mycobacterial sulfur metabolism, since it can ser
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Localized On The Inner Face Of The Cytoplasm Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7; =3.1.3.11; =3.1.3.25 [H]
Molecular weight: Translated: 24704; Mature: 24704
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDHALAAALAEQAGSLLLDIRGQGGAQGDRQSNELLLRLLAQTRPGDAVLSEESADDPV CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCE RLTRGRVWIIDPLDGTREYGEPPRDDWAVHVALAVNGTPTAGAVGLPAAGLVLHTGEPPA EEECCEEEEEECCCCCHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCC LAAPTSGPIRLAVSRTRPPACVDQLVARLDAALVPMGSAGAKAMAVVRGDVDVYAHSGGQ EECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCC YEWDSAAPVAVAHAAGLHTSRLDGGPLRYNEPNPYLPDLLICRPELADTVLRALHDA EECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCC >Mature Secondary Structure MDDHALAAALAEQAGSLLLDIRGQGGAQGDRQSNELLLRLLAQTRPGDAVLSEESADDPV CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCE RLTRGRVWIIDPLDGTREYGEPPRDDWAVHVALAVNGTPTAGAVGLPAAGLVLHTGEPPA EEECCEEEEEECCCCCHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCC LAAPTSGPIRLAVSRTRPPACVDQLVARLDAALVPMGSAGAKAMAVVRGDVDVYAHSGGQ EECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCC YEWDSAAPVAVAHAAGLHTSRLDGGPLRYNEPNPYLPDLLICRPELADTVLRALHDA EECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]