| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315938
Identifier: 158315938
GI number: 158315938
Start: 4936374
End: 4936826
Strand: Reverse
Name: 158315938
Synonym: Franean1_4156
Alternate gene names: NA
Gene position: 4936826-4936374 (Counterclockwise)
Preceding gene: 158315947
Following gene: 158315935
Centisome position: 54.96
GC content: 75.72
Gene sequence:
>453_bases ATGGCCTCGACGTCACCCGACGCCGCGCCCGCCCGGTTGCGACACGCCACCCACTGGCTGATCGCGCAGCTCGCCAAACA CGCGCAGCGGCGCAGCTCCCACGCCTTCACCGCGCTCGGCGCCCACCCCGCCCACTACGCGCTGCTCGCCGCCCTCGACG AGTTCGGCCCGGCCAGCCAGGCCACCCTCGCCCGCCGCGCCGCCCTCGACCGCGCCGACACCGCCGGACTCCTCACCGAC CTGCGCACCCGCGGCCTGGTCGAACGCACCCCCGACAGCACCGACCGGCGCCGCACCGTCATCACCCTCACCGACGAGGG CACCACCCACCTGCACCACCTCGACGCCGTCACCGCCGCGATCGGCGACGATCTGCTCGCCGGCCTGCCCCCCGCCGACC GCCACCAGTTCACCGCCCTGCTGACCCGCCTACTCACCGACCGCCCCCACTGA
Upstream 100 bases:
>100_bases GGCCGAGGCCGCGCACCTGCCGGCCCACCCGAACCGGTGCGCCACCACCCACCCTCACAACCAGCCGCCGTCCCCCAACG CCGTGGCTAGGCTTTCCGGC
Downstream 100 bases:
>100_bases CCACACACCCCCGACCGAGGCGGGCACCCCGCCCGCAGCGCTCACTGCTTCCACCTGGGCCTCTCACCGCTCCTCCTGCG GGCCGGTGAGGATCCGGGTG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator MarR Family
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQATLARRAALDRADTAGLLTD LRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAAIGDDLLAGLPPADRHQFTALLTRLLTDRPH
Sequences:
>Translated_150_residues MASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQATLARRAALDRADTAGLLTD LRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAAIGDDLLAGLPPADRHQFTALLTRLLTDRPH >Mature_149_residues ASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQATLARRAALDRADTAGLLTDL RTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAAIGDDLLAGLPPADRHQFTALLTRLLTDRPH
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16220; Mature: 16089
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCHH ATLARRAALDRADTAGLLTDLRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH IGDDLLAGLPPADRHQFTALLTRLLTDRPH HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCHH ATLARRAALDRADTAGLLTDLRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH IGDDLLAGLPPADRHQFTALLTRLLTDRPH HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA