Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315938

Identifier: 158315938

GI number: 158315938

Start: 4936374

End: 4936826

Strand: Reverse

Name: 158315938

Synonym: Franean1_4156

Alternate gene names: NA

Gene position: 4936826-4936374 (Counterclockwise)

Preceding gene: 158315947

Following gene: 158315935

Centisome position: 54.96

GC content: 75.72

Gene sequence:

>453_bases
ATGGCCTCGACGTCACCCGACGCCGCGCCCGCCCGGTTGCGACACGCCACCCACTGGCTGATCGCGCAGCTCGCCAAACA
CGCGCAGCGGCGCAGCTCCCACGCCTTCACCGCGCTCGGCGCCCACCCCGCCCACTACGCGCTGCTCGCCGCCCTCGACG
AGTTCGGCCCGGCCAGCCAGGCCACCCTCGCCCGCCGCGCCGCCCTCGACCGCGCCGACACCGCCGGACTCCTCACCGAC
CTGCGCACCCGCGGCCTGGTCGAACGCACCCCCGACAGCACCGACCGGCGCCGCACCGTCATCACCCTCACCGACGAGGG
CACCACCCACCTGCACCACCTCGACGCCGTCACCGCCGCGATCGGCGACGATCTGCTCGCCGGCCTGCCCCCCGCCGACC
GCCACCAGTTCACCGCCCTGCTGACCCGCCTACTCACCGACCGCCCCCACTGA

Upstream 100 bases:

>100_bases
GGCCGAGGCCGCGCACCTGCCGGCCCACCCGAACCGGTGCGCCACCACCCACCCTCACAACCAGCCGCCGTCCCCCAACG
CCGTGGCTAGGCTTTCCGGC

Downstream 100 bases:

>100_bases
CCACACACCCCCGACCGAGGCGGGCACCCCGCCCGCAGCGCTCACTGCTTCCACCTGGGCCTCTCACCGCTCCTCCTGCG
GGCCGGTGAGGATCCGGGTG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator MarR Family

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQATLARRAALDRADTAGLLTD
LRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAAIGDDLLAGLPPADRHQFTALLTRLLTDRPH

Sequences:

>Translated_150_residues
MASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQATLARRAALDRADTAGLLTD
LRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAAIGDDLLAGLPPADRHQFTALLTRLLTDRPH
>Mature_149_residues
ASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQATLARRAALDRADTAGLLTDL
RTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAAIGDDLLAGLPPADRHQFTALLTRLLTDRPH

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16220; Mature: 16089

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCHH
ATLARRAALDRADTAGLLTDLRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
IGDDLLAGLPPADRHQFTALLTRLLTDRPH
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASTSPDAAPARLRHATHWLIAQLAKHAQRRSSHAFTALGAHPAHYALLAALDEFGPASQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCHH
ATLARRAALDRADTAGLLTDLRTRGLVERTPDSTDRRRTVITLTDEGTTHLHHLDAVTAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
IGDDLLAGLPPADRHQFTALLTRLLTDRPH
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA