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The map label for this gene is tnpA [C]

Identifier: 158315926

GI number: 158315926

Start: 4924092

End: 4925363

Strand: Reverse

Name: tnpA [C]

Synonym: Franean1_4142

Alternate gene names: 158315926

Gene position: 4925363-4924092 (Counterclockwise)

Preceding gene: 158315931

Following gene: 158315924

Centisome position: 54.84

GC content: 70.99

Gene sequence:

>1272_bases
TTGTGCACGTTGCCGCGGCTGGGCTTCGTGCCGGACGACGTGACGTCGGCGCCGCGGGCGGCGATGGTACGGCTGGCTGA
GCGGTTAGGCGTCGACCCGGACGTCATCGGTTCGTACGGACGGCGGGCCAAGACGCGCACGGATCATCTGCGGCTGGTGG
CGCAGTATCTGGGGTGGCGGGTGCCGACGACGCTGGACCTCAAGGAGCTGGACGAGTTTCTGTTGGCGCGGGCGATGGAA
CACGACGCGCCGACGTTGCTGTTCCGGCTGGCGTGCGAGTACCTGATCTCGGCGAAGGTGATCCGGCCGGGTCCGGTGAC
GGTGGTGAAGCGGGTCGCGCACGCCCGCGAGGTCGCGCAGCAGGAGACGTTCGACCGGCTGGCGCACGAGTTCACCGGCG
AGCGTCGCGTTGGGCTGGACGGCCTGCTGGTGACCGACCCTGAGATCGGGCGCGCACACCCTGGATTGTCGGTGCTGCCG
GCGGAACGGCGCAGGTTCCTGGCCACGGTGGGCCGCCGGCTGACGGCGCAGGCGTTACAGCGGCGCGAGCCGCAGCGTCG
GTACCCAATCCTGCTGACCTTGTTGGCGCAGTCGGCGATCGACGTGCTGGACGAGGTCGTGCAGTTGTTCGACCAGGCCG
TCTCGGCGCGGGAAGCCAAGGCCGCGCACAGGATGCGCGACGAGTTGGCCGAGCGCGGCAAGGCTGGCGAGGAGCGCCAG
GCCCTGCTGGACACGGTCTTGGCGATCGTCGCCGACCCGGCGATCCCGGACGAGGACGTCGGCGGGCTGATCCGCGGGGA
GAAGGTGGGGTGGGAGCGGCTGCGTGCCGCGCAGGCCGCCGCGTTGCCACCGCTGCCACGCGACCACGGGCACCTCGCGT
CGCTGGACGGTTCCTACGGGTACCTGCGGCAGTTCACCCCACAGGTACTGGACGCGGTGACCTTCGCCGGCGGCACGGCC
ACGGCCGACCTGCTCAAAGCGGTGGACATCCTGCGTGAGTTGAACGCCACCGGGGCCCGCAAGGTCCCGGATGACGCGCC
GAGCGGCTTCGTCCCGGCCCGCTGGCGCGGCTACCTCGACACCGCGGCGAAGGCGGACAGTGTCACCGCCTACCGCCACT
ACTGGGAGCTGTGCACCTTGCTGGCGTTACGCGACGGGCTACGTACCGGCGACGTGTTCGTGTCTGGCTCGCGCCGCTAC
TCCGACCCGGCCGCCCACCTGCTCACCCCTGAGAAGTGGGCCGACCAGCGGGCCGATGGACGCCGACGGTGA

Upstream 100 bases:

>100_bases
TACTGAGGCCGGCCAGGGGATCTTCGGGTTCTGGCGGGGAGCGTTCATCGATCCCGGCCGGGGTCGAGGGCCAGCGGACC
GGCTGGGGCTTGCGGTCGCC

Downstream 100 bases:

>100_bases
CCTGGTGATCTCCCCGCTGTCCGCCGAGGACGTCCCAGCCGAGGCGGTGGCGCTCAAGGCGGAGCTGACCGAGATGCTGC
TGTTCGCCCCGGTCGTGTCG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MCTLPRLGFVPDDVTSAPRAAMVRLAERLGVDPDVIGSYGRRAKTRTDHLRLVAQYLGWRVPTTLDLKELDEFLLARAME
HDAPTLLFRLACEYLISAKVIRPGPVTVVKRVAHAREVAQQETFDRLAHEFTGERRVGLDGLLVTDPEIGRAHPGLSVLP
AERRRFLATVGRRLTAQALQRREPQRRYPILLTLLAQSAIDVLDEVVQLFDQAVSAREAKAAHRMRDELAERGKAGEERQ
ALLDTVLAIVADPAIPDEDVGGLIRGEKVGWERLRAAQAAALPPLPRDHGHLASLDGSYGYLRQFTPQVLDAVTFAGGTA
TADLLKAVDILRELNATGARKVPDDAPSGFVPARWRGYLDTAAKADSVTAYRHYWELCTLLALRDGLRTGDVFVSGSRRY
SDPAAHLLTPEKWADQRADGRRR

Sequences:

>Translated_423_residues
MCTLPRLGFVPDDVTSAPRAAMVRLAERLGVDPDVIGSYGRRAKTRTDHLRLVAQYLGWRVPTTLDLKELDEFLLARAME
HDAPTLLFRLACEYLISAKVIRPGPVTVVKRVAHAREVAQQETFDRLAHEFTGERRVGLDGLLVTDPEIGRAHPGLSVLP
AERRRFLATVGRRLTAQALQRREPQRRYPILLTLLAQSAIDVLDEVVQLFDQAVSAREAKAAHRMRDELAERGKAGEERQ
ALLDTVLAIVADPAIPDEDVGGLIRGEKVGWERLRAAQAAALPPLPRDHGHLASLDGSYGYLRQFTPQVLDAVTFAGGTA
TADLLKAVDILRELNATGARKVPDDAPSGFVPARWRGYLDTAAKADSVTAYRHYWELCTLLALRDGLRTGDVFVSGSRRY
SDPAAHLLTPEKWADQRADGRRR
>Mature_423_residues
MCTLPRLGFVPDDVTSAPRAAMVRLAERLGVDPDVIGSYGRRAKTRTDHLRLVAQYLGWRVPTTLDLKELDEFLLARAME
HDAPTLLFRLACEYLISAKVIRPGPVTVVKRVAHAREVAQQETFDRLAHEFTGERRVGLDGLLVTDPEIGRAHPGLSVLP
AERRRFLATVGRRLTAQALQRREPQRRYPILLTLLAQSAIDVLDEVVQLFDQAVSAREAKAAHRMRDELAERGKAGEERQ
ALLDTVLAIVADPAIPDEDVGGLIRGEKVGWERLRAAQAAALPPLPRDHGHLASLDGSYGYLRQFTPQVLDAVTFAGGTA
TADLLKAVDILRELNATGARKVPDDAPSGFVPARWRGYLDTAAKADSVTAYRHYWELCTLLALRDGLRTGDVFVSGSRRY
SDPAAHLLTPEKWADQRADGRRR

Specific function: Required for transposition of transposon Tn1546 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 46810; Mature: 46810

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTLPRLGFVPDDVTSAPRAAMVRLAERLGVDPDVIGSYGRRAKTRTDHLRLVAQYLGWR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHCCHHHHHHHHHHHHCCC
VPTTLDLKELDEFLLARAMEHDAPTLLFRLACEYLISAKVIRPGPVTVVKRVAHAREVAQ
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QETFDRLAHEFTGERRVGLDGLLVTDPEIGRAHPGLSVLPAERRRFLATVGRRLTAQALQ
HHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RREPQRRYPILLTLLAQSAIDVLDEVVQLFDQAVSAREAKAAHRMRDELAERGKAGEERQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ALLDTVLAIVADPAIPDEDVGGLIRGEKVGWERLRAAQAAALPPLPRDHGHLASLDGSYG
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHH
YLRQFTPQVLDAVTFAGGTATADLLKAVDILRELNATGARKVPDDAPSGFVPARWRGYLD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
TAAKADSVTAYRHYWELCTLLALRDGLRTGDVFVSGSRRYSDPAAHLLTPEKWADQRADG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCHHHHHHCCCC
RRR
CCC
>Mature Secondary Structure
MCTLPRLGFVPDDVTSAPRAAMVRLAERLGVDPDVIGSYGRRAKTRTDHLRLVAQYLGWR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHCCHHHHHHHHHHHHCCC
VPTTLDLKELDEFLLARAMEHDAPTLLFRLACEYLISAKVIRPGPVTVVKRVAHAREVAQ
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QETFDRLAHEFTGERRVGLDGLLVTDPEIGRAHPGLSVLPAERRRFLATVGRRLTAQALQ
HHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RREPQRRYPILLTLLAQSAIDVLDEVVQLFDQAVSAREAKAAHRMRDELAERGKAGEERQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ALLDTVLAIVADPAIPDEDVGGLIRGEKVGWERLRAAQAAALPPLPRDHGHLASLDGSYG
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHH
YLRQFTPQVLDAVTFAGGTATADLLKAVDILRELNATGARKVPDDAPSGFVPARWRGYLD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
TAAKADSVTAYRHYWELCTLLALRDGLRTGDVFVSGSRRYSDPAAHLLTPEKWADQRADG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCHHHHHHCCCC
RRR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8380148 [H]