Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yybG [H]

Identifier: 158315915

GI number: 158315915

Start: 4913097

End: 4914023

Strand: Reverse

Name: yybG [H]

Synonym: Franean1_4130

Alternate gene names: 158315915

Gene position: 4914023-4913097 (Counterclockwise)

Preceding gene: 158315916

Following gene: 158315914

Centisome position: 54.71

GC content: 69.47

Gene sequence:

>927_bases
ATGACACCCACCACCACTGTCAGCTCGGGAGATCTCCCCGCCGGTAACGCGCCCGCCACCCGCGGCAACGGACGGTTCAT
CATGGTCGCTGTGGCCCTACCCGATCCGCTGCGCTGCGACTGCGGGAACTGCTTCGGCCTGTGCTGCGTGGCACCGGCCT
TCGCCGCCTCCGCGGACTTCGCCATCGACAAGAAAGCCGGGCAACCCTGCCCCAACCTGCAGGCGGACAACCACTGCGGT
ATCCACGGCCAGCTACGCGACCGCGGCTTCACCGGATGCGCCGTCTTCGACTGCTTCGGTGCGGGACAACACGTCAGCCA
GGTCACCTTCGACGGACAGGACTGGCGGCACACCCCCCGCCTCGCCCGACAGATGTTCGCGGTCTTCCCCATCATGCGCC
AACTGCACGAACTGCTCTGGTACCTGACCGCCGCACTCGACCTCGGGCCGGCCCAGCCGATACACCCCGAGCTGGCCGCC
GCCCACGACCAGACCCGACGACTCACCCACGCCACCCCAGAGCAACTCACCGCGCTGGACATCACCCGCCACCGCCATGA
CGTCAACCTGCTCCTGCAACAGGCAAGCGACCTGGCACGCGCACGGGCGGGCCGGCGACGGCCGCAGTACCGCGGTGCTG
ACCTCACCGGCGCCAACCTGCGCCGCACCGACCTGAACGGGGCGAACCTGCGCGGAGCACGACTCATCGGCGCCGACCTG
CGCAACGCAGACCTGACCACAGCCGATGTGACCGGCGCCGACCTACGCGCCGCGAACCTGCGCGGCGCACGCCTCGCCGA
CACCCTCTTCCTGACCCAGACACAGCTCGACTCCGCGCACGGCAACCTCGACACCACCATCCCCGCAACGCTGAGCCGGC
CCCGCCACTGGCACGCCAAGCCTTCTCCGATAGCGGATGCGGTCTGA

Upstream 100 bases:

>100_bases
GATCATCGGCTTCGACCAGAGCCCGGTCATGGTGGCGCTGACCCGCAAACTCGTCCCCACCGCCAGGTGAACTGACCAGG
CTGCCCCGCCAGGCGTGTCC

Downstream 100 bases:

>100_bases
TTCGTCTCCACGTCACCGTCGACCACCTGGTTCGCAGCCCGGAGGCACCATGTCCGAGTCCGACCGGAAGATGCACGCCA
GCGAGGTCGTCATCGACACC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTPTTTVSSGDLPAGNAPATRGNGRFIMVAVALPDPLRCDCGNCFGLCCVAPAFAASADFAIDKKAGQPCPNLQADNHCG
IHGQLRDRGFTGCAVFDCFGAGQHVSQVTFDGQDWRHTPRLARQMFAVFPIMRQLHELLWYLTAALDLGPAQPIHPELAA
AHDQTRRLTHATPEQLTALDITRHRHDVNLLLQQASDLARARAGRRRPQYRGADLTGANLRRTDLNGANLRGARLIGADL
RNADLTTADVTGADLRAANLRGARLADTLFLTQTQLDSAHGNLDTTIPATLSRPRHWHAKPSPIADAV

Sequences:

>Translated_308_residues
MTPTTTVSSGDLPAGNAPATRGNGRFIMVAVALPDPLRCDCGNCFGLCCVAPAFAASADFAIDKKAGQPCPNLQADNHCG
IHGQLRDRGFTGCAVFDCFGAGQHVSQVTFDGQDWRHTPRLARQMFAVFPIMRQLHELLWYLTAALDLGPAQPIHPELAA
AHDQTRRLTHATPEQLTALDITRHRHDVNLLLQQASDLARARAGRRRPQYRGADLTGANLRRTDLNGANLRGARLIGADL
RNADLTTADVTGADLRAANLRGARLADTLFLTQTQLDSAHGNLDTTIPATLSRPRHWHAKPSPIADAV
>Mature_307_residues
TPTTTVSSGDLPAGNAPATRGNGRFIMVAVALPDPLRCDCGNCFGLCCVAPAFAASADFAIDKKAGQPCPNLQADNHCGI
HGQLRDRGFTGCAVFDCFGAGQHVSQVTFDGQDWRHTPRLARQMFAVFPIMRQLHELLWYLTAALDLGPAQPIHPELAAA
HDQTRRLTHATPEQLTALDITRHRHDVNLLLQQASDLARARAGRRRPQYRGADLTGANLRRTDLNGANLRGARLIGADLR
NADLTTADVTGADLRAANLRGARLADTLFLTQTQLDSAHGNLDTTIPATLSRPRHWHAKPSPIADAV

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 33247; Mature: 33116

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTTTVSSGDLPAGNAPATRGNGRFIMVAVALPDPLRCDCGNCFGLCCVAPAFAASADF
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
AIDKKAGQPCPNLQADNHCGIHGQLRDRGFTGCAVFDCFGAGQHVSQVTFDGQDWRHTPR
EEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEHHCCCCCHHEEEECCCCCCCCHH
LARQMFAVFPIMRQLHELLWYLTAALDLGPAQPIHPELAAAHDQTRRLTHATPEQLTALD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
ITRHRHDVNLLLQQASDLARARAGRRRPQYRGADLTGANLRRTDLNGANLRGARLIGADL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCC
RNADLTTADVTGADLRAANLRGARLADTLFLTQTQLDSAHGNLDTTIPATLSRPRHWHAK
CCCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCC
PSPIADAV
CCCCCCCC
>Mature Secondary Structure 
TPTTTVSSGDLPAGNAPATRGNGRFIMVAVALPDPLRCDCGNCFGLCCVAPAFAASADF
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
AIDKKAGQPCPNLQADNHCGIHGQLRDRGFTGCAVFDCFGAGQHVSQVTFDGQDWRHTPR
EEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEHHCCCCCHHEEEECCCCCCCCHH
LARQMFAVFPIMRQLHELLWYLTAALDLGPAQPIHPELAAAHDQTRRLTHATPEQLTALD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
ITRHRHDVNLLLQQASDLARARAGRRRPQYRGADLTGANLRRTDLNGANLRGARLIGADL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCC
RNADLTTADVTGADLRAANLRGARLADTLFLTQTQLDSAHGNLDTTIPATLSRPRHWHAK
CCCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCC
PSPIADAV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]