| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315905
Identifier: 158315905
GI number: 158315905
Start: 4903243
End: 4903587
Strand: Reverse
Name: 158315905
Synonym: Franean1_4120
Alternate gene names: NA
Gene position: 4903587-4903243 (Counterclockwise)
Preceding gene: 158315906
Following gene: 158315904
Centisome position: 54.59
GC content: 72.46
Gene sequence:
>345_bases GTGGGTATTGAGGATATTCGCGAGCCGACCTTCCTGGTGCTCGCGGCACTCGCCGACGGCGCCAAACACGGGTACGCGTT GATCCGCGAGGTCGACACCATCTCCCAAGGCCGGGTGACCCTCCGAGCGGGCACCCTCTACGCCGCCCTCGCCCGCCTCG CCGACCAGGGCCTCGTCCGCCAACGCGGCGAGGAGATCGTCGACGGCCGGCTACGGCGCTACTACGACCTCACCGACGCC GGCGCCGAGGTCCTCGCCGCACAGGCCGACCGACTACGGGCGAACGCCGCCGAGGCCGACCGCCGACTCCGCTCCCGGGC CCACCTGCGGACGGCCCAGGCATGA
Upstream 100 bases:
>100_bases CCGGCCCCGACGGCGCCGATCGGGGTCGATCGGCAACGCTGGAACGCCAGCCCCGCAGAGACGTCCACAGATATACAGAT CATCGGTATATACTGATGAT
Downstream 100 bases:
>100_bases CCACCCCACGCCTCGAGAGCACCTACCGTCAGCTGCTGCGGTGCTACCCACGCCGCTGGCGGCAGGACAACGGCGACGAG GTCGTCGCCACCCTCCTCGA
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; PadR Family Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator-Like Protein; ParR Family Transcriptional Regulator
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MGIEDIREPTFLVLAALADGAKHGYALIREVDTISQGRVTLRAGTLYAALARLADQGLVRQRGEEIVDGRLRRYYDLTDA GAEVLAAQADRLRANAAEADRRLRSRAHLRTAQA
Sequences:
>Translated_114_residues MGIEDIREPTFLVLAALADGAKHGYALIREVDTISQGRVTLRAGTLYAALARLADQGLVRQRGEEIVDGRLRRYYDLTDA GAEVLAAQADRLRANAAEADRRLRSRAHLRTAQA >Mature_113_residues GIEDIREPTFLVLAALADGAKHGYALIREVDTISQGRVTLRAGTLYAALARLADQGLVRQRGEEIVDGRLRRYYDLTDAG AEVLAAQADRLRANAAEADRRLRSRAHLRTAQA
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12514; Mature: 12383
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEDIREPTFLVLAALADGAKHGYALIREVDTISQGRVTLRAGTLYAALARLADQGLVR CCCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH QRGEEIVDGRLRRYYDLTDAGAEVLAAQADRLRANAAEADRRLRSRAHLRTAQA HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIEDIREPTFLVLAALADGAKHGYALIREVDTISQGRVTLRAGTLYAALARLADQGLVR CCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH QRGEEIVDGRLRRYYDLTDAGAEVLAAQADRLRANAAEADRRLRSRAHLRTAQA HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA