| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is hsaB [H]
Identifier: 158315886
GI number: 158315886
Start: 4886958
End: 4887512
Strand: Reverse
Name: hsaB [H]
Synonym: Franean1_4101
Alternate gene names: 158315886
Gene position: 4887512-4886958 (Counterclockwise)
Preceding gene: 158315887
Following gene: 158315884
Centisome position: 54.41
GC content: 72.97
Gene sequence:
>555_bases ATGACCTACCACCGCACCGCTCACCCGGCGCACCGCGGCGTACTCGACGCCGACCCGCCCGTACGGCGGGCCGCGACGCA GGTCTTCGACCCCGGGCGGCTGCGGAGCGTCTTCGGTGCCTTCCCCTCGGGCGTGGCGGCGGTGGCGGCGCTCGTCGACG GCGTGCCGGTGGGGATCGCGGCAAGCTCGTTCACCTCGGTCTCCCTGGACCCGCCACTGGTATCGCTGTGCATAGGCCAC ACGTCCAGTACCTGGCCCGCACTGCGCGCCGCGCCGCGGCTCGGGCTGAGCATCCTCAGTGCCGAGCAGGAGCGGGCGGC CCGCCAGCTCGCGGGCGGGCAGGGCGACCGTTTCGCCGAGCTGCGCTGGCGGGTGACCGACGACAGCGCCGTCCTGCTCG ACGGAGCCAGCGCCTGGATCGAGACCAGCATCGACCAGCAGGTACGCGCCGGCGACCACGACATCGTCGTGCTGCGCGTG CACGACCTGGACGCCGACCACGACATCAGCCCGCTGGTGTTCCACGCCAGCCAGTTCCGCAGGCTCGAACGCTGA
Upstream 100 bases:
>100_bases GCCATCCGGGCACTTGAGCTCATCGCCACAGTGGTCGCCCCCGCACTGGGGTGGCGTCCAGCGTCCGCCGCCGAGCTCGA ACCGGCAGGAGTGTGAACTC
Downstream 100 bases:
>100_bases CCGCACGGGATCGCCAGCGGTGCGCAGAGCTGAGCTCTCCTTGGTCCTCGCGTCCACCTGCCTGGGCGATGGGCACAAAA GTCGGGACTGTGGTGAGGTA
Product: flavin reductase domain-containing protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: Flavin:NADH reductase [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTYHRTAHPAHRGVLDADPPVRRAATQVFDPGRLRSVFGAFPSGVAAVAALVDGVPVGIAASSFTSVSLDPPLVSLCIGH TSSTWPALRAAPRLGLSILSAEQERAARQLAGGQGDRFAELRWRVTDDSAVLLDGASAWIETSIDQQVRAGDHDIVVLRV HDLDADHDISPLVFHASQFRRLER
Sequences:
>Translated_184_residues MTYHRTAHPAHRGVLDADPPVRRAATQVFDPGRLRSVFGAFPSGVAAVAALVDGVPVGIAASSFTSVSLDPPLVSLCIGH TSSTWPALRAAPRLGLSILSAEQERAARQLAGGQGDRFAELRWRVTDDSAVLLDGASAWIETSIDQQVRAGDHDIVVLRV HDLDADHDISPLVFHASQFRRLER >Mature_183_residues TYHRTAHPAHRGVLDADPPVRRAATQVFDPGRLRSVFGAFPSGVAAVAALVDGVPVGIAASSFTSVSLDPPLVSLCIGHT SSTWPALRAAPRLGLSILSAEQERAARQLAGGQGDRFAELRWRVTDDSAVLLDGASAWIETSIDQQVRAGDHDIVVLRVH DLDADHDISPLVFHASQFRRLER
Specific function: Catalyzes the reduction of free flavins (FMN or FAD) by NADH. Subsequently, the reduced flavins diffuse to the HsaA oxygenase subunit [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the non-flavoprotein flavin reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 19770; Mature: 19639
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYHRTAHPAHRGVLDADPPVRRAATQVFDPGRLRSVFGAFPSGVAAVAALVDGVPVGIA CCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEE ASSFTSVSLDPPLVSLCIGHTSSTWPALRAAPRLGLSILSAEQERAARQLAGGQGDRFAE CCCCCEECCCCHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LRWRVTDDSAVLLDGASAWIETSIDQQVRAGDHDIVVLRVHDLDADHDISPLVFHASQFR EEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH RLER HHCC >Mature Secondary Structure TYHRTAHPAHRGVLDADPPVRRAATQVFDPGRLRSVFGAFPSGVAAVAALVDGVPVGIA CCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEE ASSFTSVSLDPPLVSLCIGHTSSTWPALRAAPRLGLSILSAEQERAARQLAGGQGDRFAE CCCCCEECCCCHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LRWRVTDDSAVLLDGASAWIETSIDQQVRAGDHDIVVLRVHDLDADHDISPLVFHASQFR EEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH RLER HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA