| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315809
Identifier: 158315809
GI number: 158315809
Start: 4799623
End: 4800018
Strand: Reverse
Name: 158315809
Synonym: Franean1_4024
Alternate gene names: NA
Gene position: 4800018-4799623 (Counterclockwise)
Preceding gene: 158315810
Following gene: 158315804
Centisome position: 53.44
GC content: 75.0
Gene sequence:
>396_bases ATGGTCCCCGCGCCGGGTGAGACACCGGGCGACTGGTGGGGCAACACCGGCGCCGAGGAGGCGCGGGCCGCCACAGCGCG GGCGGCCGGGTACGGCACCGAGTTCGATCCGGAGGTGTACTTCCTGCACGATCTGCCGCGCCAGGTCGCGGCCGACGGTG AGGCCCACCAGCGGGCCGAGAGCGCCGCGGTGTTCGCCTCGACGTGTGACCTCGACGCCTGGCCCGACGTCCCGACCCGG GTCGCCGCCGGCGCCGACGACCGGTTCTTCCCGGTCGACTTCCAGCGGCGGGTCGCCCGGGAACGGCTGGGCGTCGAGGC GGACACGTTGCCCGGCGGGCACCTCCTCGCGCTGAGCCAGCCGCAGGCGCTCGTGGGCTACCTGCTCGCTACTTGA
Upstream 100 bases:
>100_bases AAACCCTGGTGCCCGGCGACGGCGCCGCGCTCAGCGAGACCCACCTCGTCGACTGGCTGAAGGAGTCGACTGGCTGAAGG AACGGTAGGTACCACCCGGT
Downstream 100 bases:
>100_bases CCTCGGTCAGGCTGCCGTCCCGCACCGAGTAGACGAAGCCGCGCACCGCGTCGGTGTGCGGGATGAACGGGCTCGACCGT ATGCGGGCGATGGACTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Alpha/Beta Fold Family Protein
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVPAPGETPGDWWGNTGAEEARAATARAAGYGTEFDPEVYFLHDLPRQVAADGEAHQRAESAAVFASTCDLDAWPDVPTR VAAGADDRFFPVDFQRRVARERLGVEADTLPGGHLLALSQPQALVGYLLAT
Sequences:
>Translated_131_residues MVPAPGETPGDWWGNTGAEEARAATARAAGYGTEFDPEVYFLHDLPRQVAADGEAHQRAESAAVFASTCDLDAWPDVPTR VAAGADDRFFPVDFQRRVARERLGVEADTLPGGHLLALSQPQALVGYLLAT >Mature_131_residues MVPAPGETPGDWWGNTGAEEARAATARAAGYGTEFDPEVYFLHDLPRQVAADGEAHQRAESAAVFASTCDLDAWPDVPTR VAAGADDRFFPVDFQRRVARERLGVEADTLPGGHLLALSQPQALVGYLLAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14008; Mature: 14008
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAPGETPGDWWGNTGAEEARAATARAAGYGTEFDPEVYFLHDLPRQVAADGEAHQRAE CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHH SAAVFASTCDLDAWPDVPTRVAAGADDRFFPVDFQRRVARERLGVEADTLPGGHLLALSQ HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECC PQALVGYLLAT CHHHHHHHHCC >Mature Secondary Structure MVPAPGETPGDWWGNTGAEEARAATARAAGYGTEFDPEVYFLHDLPRQVAADGEAHQRAE CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHH SAAVFASTCDLDAWPDVPTRVAAGADDRFFPVDFQRRVARERLGVEADTLPGGHLLALSQ HHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECC PQALVGYLLAT CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA