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The map label for this gene is 158315784

Identifier: 158315784

GI number: 158315784

Start: 4780375

End: 4781085

Strand: Reverse

Name: 158315784

Synonym: Franean1_3997

Alternate gene names: NA

Gene position: 4781085-4780375 (Counterclockwise)

Preceding gene: 158315785

Following gene: 158315777

Centisome position: 53.23

GC content: 69.06

Gene sequence:

>711_bases
GTGCGCGAACTGCTCGACGGCCCGCACGCCCGCTGCCCGCTGCCCGCTGAAGCGTTACAACGCCGGCCGTCCCGTCAAGG
ACAGCTCCGGCCGCTGCGATCGCGACGAACACCTCGCCGAGCCGGAGCGCTTGCACTGCTGATGGCAGCAGTCCGGGCCA
AAGCCGGAGGTCATGCGCTGCGTGGCAGTGGAGCGGATCGCGATGCGGCCTCGGTGAGGCGGCGCTGCGCTCCGCCGGGT
CCTGAAGACCCTCGGGTTGCCACCGGCTCCGAAACGGCAGACCGACACGACGTGGCGGCAGTTCCTGCTCACCCAGGCCT
CGACCATGCTGGCCGTCGACTTCTTCCATGTGGACTGCGCCGTGACGCTGCGGCGGTTGTACTGCTTCTTCGTCCTGGAG
GTCGGCTCCCGCACCGTCCACATCCTCGGGGTCACCGCCCACCCCGGACTCCGCGAGCGAACGCCTACGCGGAACGGTTC
GCCCTAACCGTCCGGACCGAGGTCACCGACCGAATGCTGATCTTCGGTGAACGGCACCTGCACGCTGTCCTGGCCGAGTA
CGCACGGCACTACAACGGACGACGGCCCCACCGCGGCCGCGACCTTCAACCACCACGGCCCGACCACCCCGTCGCCGACC
TGACCCAGGAACGGATCAAGCGCCAGCCCGTCCTCGGCGGCCTGATCAACGAATACGAACGAGCCGCCTAA

Upstream 100 bases:

>100_bases
ATGCGGTTGGGCAGGAACGGGCGCTCCGTCAAAGCGCGTCGAGTTTGTCGGCGCGGCCTGCCAGCTCGCAGTCCAGGGCG
AGGTCGAGGTCGAGGACGCG

Downstream 100 bases:

>100_bases
AAACCCAGGTCAACGCCGGTGGCCGAGTTCTGACACCCCACAGGCGGACTGGGTGAGCTCGGCGAACGTCTCAGCGTTGT
GTTCCCGCACCCAGGTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Transposase; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Integrase Catalytic Region

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRELLDGPHARCPLPAEALQRRPSRQGQLRPLRSRRTPRRAGALALLMAAVRAKAGGHALRGSGADRDAASVRRRCAPPG
PEDPRVATGSETADRHDVAAVPAHPGLDHAGRRLLPCGLRRDAAAVVLLLRPGGRLPHRPHPRGHRPPRTPRANAYAERF
ALTVRTEVTDRMLIFGERHLHAVLAEYARHYNGRRPHRGRDLQPPRPDHPVADLTQERIKRQPVLGGLINEYERAA

Sequences:

>Translated_236_residues
MRELLDGPHARCPLPAEALQRRPSRQGQLRPLRSRRTPRRAGALALLMAAVRAKAGGHALRGSGADRDAASVRRRCAPPG
PEDPRVATGSETADRHDVAAVPAHPGLDHAGRRLLPCGLRRDAAAVVLLLRPGGRLPHRPHPRGHRPPRTPRANAYAERF
ALTVRTEVTDRMLIFGERHLHAVLAEYARHYNGRRPHRGRDLQPPRPDHPVADLTQERIKRQPVLGGLINEYERAA
>Mature_236_residues
MRELLDGPHARCPLPAEALQRRPSRQGQLRPLRSRRTPRRAGALALLMAAVRAKAGGHALRGSGADRDAASVRRRCAPPG
PEDPRVATGSETADRHDVAAVPAHPGLDHAGRRLLPCGLRRDAAAVVLLLRPGGRLPHRPHPRGHRPPRTPRANAYAERF
ALTVRTEVTDRMLIFGERHLHAVLAEYARHYNGRRPHRGRDLQPPRPDHPVADLTQERIKRQPVLGGLINEYERAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26134; Mature: 26134

Theoretical pI: Translated: 12.09; Mature: 12.09

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELLDGPHARCPLPAEALQRRPSRQGQLRPLRSRRTPRRAGALALLMAAVRAKAGGHAL
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEE
RGSGADRDAASVRRRCAPPGPEDPRVATGSETADRHDVAAVPAHPGLDHAGRRLLPCGLR
CCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
RDAAAVVLLLRPGGRLPHRPHPRGHRPPRTPRANAYAERFALTVRTEVTDRMLIFGERHL
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAVLAEYARHYNGRRPHRGRDLQPPRPDHPVADLTQERIKRQPVLGGLINEYERAA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRELLDGPHARCPLPAEALQRRPSRQGQLRPLRSRRTPRRAGALALLMAAVRAKAGGHAL
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEE
RGSGADRDAASVRRRCAPPGPEDPRVATGSETADRHDVAAVPAHPGLDHAGRRLLPCGLR
CCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
RDAAAVVLLLRPGGRLPHRPHPRGHRPPRTPRANAYAERFALTVRTEVTDRMLIFGERHL
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAVLAEYARHYNGRRPHRGRDLQPPRPDHPVADLTQERIKRQPVLGGLINEYERAA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA