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The map label for this gene is bbsG [H]

Identifier: 158315746

GI number: 158315746

Start: 4738427

End: 4739707

Strand: Reverse

Name: bbsG [H]

Synonym: Franean1_3958

Alternate gene names: 158315746

Gene position: 4739707-4738427 (Counterclockwise)

Preceding gene: 158315747

Following gene: 158315745

Centisome position: 52.77

GC content: 74.55

Gene sequence:

>1281_bases
ATGAGCACCGCTGAGGTGGCCCCGCCCCACACGGGCAACGGCACGACACCGGACGGCACGGCGACGGGCGGCACGGCGAC
GGGCCTCGTCACGGGGGCCGCCGACGTCGGCGAGCTCGCGCGGCGCACCCTCGCGTTTGTGCGCGACGACGTGCTGCCGA
TCGAGCGCGAGCTGATCGTCGCGGGCCGGCACATGGACGACGACGTCCGCGTCGGCCTGCAGCGGGCGGCCCGCGCGGCG
GGCGTCTTCGGGCCGCTGACGCCGGTCGCGCTCGGCGGGCTCGGCCTGGACAACGCCGGTCTCGCGGAGGTGCTCGAGGC
CGCCGGGACGAGCCTCATCGGCCCGATCGCCGTGAACTGCGCGGCGCCCGACGACGGGAACATGCACCTGCTCGCCGACG
TCGCGACGCCGAGCCAGGCCGAGCGCTATCTGCACCCACTGCTGCGCGGCGAGACCCGCTCGGCGATCGCGCTCACCGAG
CCGGCGCCGGGCGCGGGCTCGGACCCGTCAATGGTCCGCACGACGGCGCGGCAGGTCGACGGCGGCTGGGTCATCGACGG
GGCGAAGCACTTCATCACCGGGGCTGAGGGCGCCGCGTTCACGATCTGCATCGCCCGTACCGAGGGCGGCACCACCATGT
TCCTGGTCGACCAGGACAACCCCGGCCTGGCCGTCGGACGGCGGATGCCCACCCTGGATCACAGTGCCCCGGGCGGGCAC
TGCGAGGTGACGTTCGCCGACTGTTTCGTCCCCGACGAGGCGGTACTCGGCGACGTCGGCGCCGGGCTGCGCTACGCCCA
GGTGCGGCTGGCCCCGGCCCGGCTCGCGTTCTGCATGAGCTGGCTGGGGATCGCCGCCCGGGCACACGGCATGGCGGCCG
AGTGGATCCAGCGCCGGAGCTCGTTCGGCCGGCCGATCTCCGAGCACGGCATGGCCCAGGCGCACGTCGCCGACAACGAG
ATCGACATCGCCGCCGCCCGCGCCCTGGTCCGCTCGGTGGCCCGGGTGCTCGACGAGCAGGGTGTGGCCAGCTCCGCCGC
GCGGCACGGCGCCGCGATCGCCAAGACGTTCGTCGCCGAGGCGGTGTGGCGGGTCCTGGACCGGGTCGTGCAGCTCTACG
GCGGCCTCGGGATCTGCGAGGACCACCTGGTGGCGCGCTTCCTCGTCGAGGCCCGCGGGTTCCGCATCTACGAGGGCTCG
TCCGAGGTCCTGCGCACCTCCATCGCCAAGCGGGTGCTGCGGGCCCACCAGCCGGCCACCATCGGAGAGGAGACACGGTG
A

Upstream 100 bases:

>100_bases
CCACCCCGACAACCTCGCGGAGCTCTACGAGGAGGTCGGCATGCCCGCCGAGAAGCGCCTGCTGTCGGCCAGCTGATCCA
GGACCGGGAGGCATCGGCTG

Downstream 100 bases:

>100_bases
CACCGACGTCCGCACCGACCGCGGCGACCAGTCCCGGCCAACCCAGTCCCGGCCAGCCCGGCGCGGCGGCGGGTGGGGAG
AGCCGGCCCGGTCCGTTCGC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MSTAEVAPPHTGNGTTPDGTATGGTATGLVTGAADVGELARRTLAFVRDDVLPIERELIVAGRHMDDDVRVGLQRAARAA
GVFGPLTPVALGGLGLDNAGLAEVLEAAGTSLIGPIAVNCAAPDDGNMHLLADVATPSQAERYLHPLLRGETRSAIALTE
PAPGAGSDPSMVRTTARQVDGGWVIDGAKHFITGAEGAAFTICIARTEGGTTMFLVDQDNPGLAVGRRMPTLDHSAPGGH
CEVTFADCFVPDEAVLGDVGAGLRYAQVRLAPARLAFCMSWLGIAARAHGMAAEWIQRRSSFGRPISEHGMAQAHVADNE
IDIAAARALVRSVARVLDEQGVASSAARHGAAIAKTFVAEAVWRVLDRVVQLYGGLGICEDHLVARFLVEARGFRIYEGS
SEVLRTSIAKRVLRAHQPATIGEETR

Sequences:

>Translated_426_residues
MSTAEVAPPHTGNGTTPDGTATGGTATGLVTGAADVGELARRTLAFVRDDVLPIERELIVAGRHMDDDVRVGLQRAARAA
GVFGPLTPVALGGLGLDNAGLAEVLEAAGTSLIGPIAVNCAAPDDGNMHLLADVATPSQAERYLHPLLRGETRSAIALTE
PAPGAGSDPSMVRTTARQVDGGWVIDGAKHFITGAEGAAFTICIARTEGGTTMFLVDQDNPGLAVGRRMPTLDHSAPGGH
CEVTFADCFVPDEAVLGDVGAGLRYAQVRLAPARLAFCMSWLGIAARAHGMAAEWIQRRSSFGRPISEHGMAQAHVADNE
IDIAAARALVRSVARVLDEQGVASSAARHGAAIAKTFVAEAVWRVLDRVVQLYGGLGICEDHLVARFLVEARGFRIYEGS
SEVLRTSIAKRVLRAHQPATIGEETR
>Mature_425_residues
STAEVAPPHTGNGTTPDGTATGGTATGLVTGAADVGELARRTLAFVRDDVLPIERELIVAGRHMDDDVRVGLQRAARAAG
VFGPLTPVALGGLGLDNAGLAEVLEAAGTSLIGPIAVNCAAPDDGNMHLLADVATPSQAERYLHPLLRGETRSAIALTEP
APGAGSDPSMVRTTARQVDGGWVIDGAKHFITGAEGAAFTICIARTEGGTTMFLVDQDNPGLAVGRRMPTLDHSAPGGHC
EVTFADCFVPDEAVLGDVGAGLRYAQVRLAPARLAFCMSWLGIAARAHGMAAEWIQRRSSFGRPISEHGMAQAHVADNEI
DIAAARALVRSVARVLDEQGVASSAARHGAAIAKTFVAEAVWRVLDRVVQLYGGLGICEDHLVARFLVEARGFRIYEGSS
EVLRTSIAKRVLRAHQPATIGEETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI48976061, Length=417, Percent_Identity=34.2925659472422, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI211971008, Length=417, Percent_Identity=34.2925659472422, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI38505218, Length=396, Percent_Identity=27.2727272727273, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI21361497, Length=387, Percent_Identity=28.4237726098191, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557233, Length=384, Percent_Identity=28.3854166666667, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4501859, Length=302, Percent_Identity=29.8013245033113, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI4557235, Length=387, Percent_Identity=27.6485788113695, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI76496475, Length=387, Percent_Identity=27.6485788113695, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI7656849, Length=354, Percent_Identity=27.683615819209, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI226958412, Length=389, Percent_Identity=26.2210796915167, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI226958414, Length=337, Percent_Identity=27.893175074184, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4501857, Length=380, Percent_Identity=25.5263157894737, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI187960098, Length=387, Percent_Identity=26.3565891472868, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4557231, Length=387, Percent_Identity=26.3565891472868, Blast_Score=116, Evalue=4e-26,
Organism=Escherichia coli, GI87081958, Length=277, Percent_Identity=30.3249097472924, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1786223, Length=349, Percent_Identity=26.9340974212034, Blast_Score=101, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=340, Percent_Identity=30.8823529411765, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17534899, Length=396, Percent_Identity=27.7777777777778, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17569725, Length=410, Percent_Identity=27.8048780487805, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17508101, Length=293, Percent_Identity=30.0341296928328, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17570075, Length=397, Percent_Identity=27.2040302267003, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71985184, Length=384, Percent_Identity=28.90625, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17538396, Length=343, Percent_Identity=26.530612244898, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=265, Percent_Identity=27.9245283018868, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=27.0557029177719, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17551932, Length=345, Percent_Identity=28.4057971014493, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=212, Percent_Identity=28.7735849056604, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=340, Percent_Identity=27.6470588235294, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=301, Percent_Identity=27.2425249169435, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534353, Length=401, Percent_Identity=23.1920199501247, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=26.2773722627737, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=180, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24660351, Length=415, Percent_Identity=28.6746987951807, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI21356377, Length=348, Percent_Identity=29.8850574712644, Blast_Score=134, Evalue=8e-32,
Organism=Drosophila melanogaster, GI281363737, Length=342, Percent_Identity=29.2397660818713, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24666513, Length=407, Percent_Identity=27.7641277641278, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24646207, Length=330, Percent_Identity=29.6969696969697, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI21355753, Length=395, Percent_Identity=25.8227848101266, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI19920834, Length=287, Percent_Identity=26.1324041811847, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 44502; Mature: 44371

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAEVAPPHTGNGTTPDGTATGGTATGLVTGAADVGELARRTLAFVRDDVLPIERELIV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCHHHEE
AGRHMDDDVRVGLQRAARAAGVFGPLTPVALGGLGLDNAGLAEVLEAAGTSLIGPIAVNC
ECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCEECCEEEEE
AAPDDGNMHLLADVATPSQAERYLHPLLRGETRSAIALTEPAPGAGSDPSMVRTTARQVD
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCC
GGWVIDGAKHFITGAEGAAFTICIARTEGGTTMFLVDQDNPGLAVGRRMPTLDHSAPGGH
CCEEECCCHHHEECCCCCEEEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCCCCCCE
CEVTFADCFVPDEAVLGDVGAGLRYAQVRLAPARLAFCMSWLGIAARAHGMAAEWIQRRS
EEEEEEECCCCCHHHHHHHCCCCEEEHEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SFGRPISEHGMAQAHVADNEIDIAAARALVRSVARVLDEQGVASSAARHGAAIAKTFVAE
HHCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AVWRVLDRVVQLYGGLGICEDHLVARFLVEARGFRIYEGSSEVLRTSIAKRVLRAHQPAT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCC
IGEETR
CCCCCC
>Mature Secondary Structure 
STAEVAPPHTGNGTTPDGTATGGTATGLVTGAADVGELARRTLAFVRDDVLPIERELIV
CCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCHHHEE
AGRHMDDDVRVGLQRAARAAGVFGPLTPVALGGLGLDNAGLAEVLEAAGTSLIGPIAVNC
ECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCEECCEEEEE
AAPDDGNMHLLADVATPSQAERYLHPLLRGETRSAIALTEPAPGAGSDPSMVRTTARQVD
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCC
GGWVIDGAKHFITGAEGAAFTICIARTEGGTTMFLVDQDNPGLAVGRRMPTLDHSAPGGH
CCEEECCCHHHEECCCCCEEEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCCCCCCE
CEVTFADCFVPDEAVLGDVGAGLRYAQVRLAPARLAFCMSWLGIAARAHGMAAEWIQRRS
EEEEEEECCCCCHHHHHHHCCCCEEEHEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SFGRPISEHGMAQAHVADNEIDIAAARALVRSVARVLDEQGVASSAARHGAAIAKTFVAE
HHCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AVWRVLDRVVQLYGGLGICEDHLVARFLVEARGFRIYEGSSEVLRTSIAKRVLRAHQPAT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCCC
IGEETR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]